SRR2933985.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933985.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	649133
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGC	4340	0.6685840960173031	No Hit
CTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGCT	3659	0.5636749325638968	No Hit
TCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGC	3345	0.5153027191654099	No Hit
GCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGC	3292	0.5071379825089773	No Hit
TCCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTG	1292	0.19903471245492063	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	920	0.1417275042248661	No Hit
GCCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTG	918	0.14141940095481204	No Hit
CGCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTG	891	0.1372600068090823	No Hit
TGCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTG	780	0.12016027532108212	No Hit
TTCCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCT	754	0.11615493281037939	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAGGTCG	25	3.8889222E-5	45.000004	20
CTATGCG	20	7.031014E-4	45.000004	1
ACTATGC	25	3.8889222E-5	45.000004	8
TCGCACT	20	7.031014E-4	45.000004	29
TCGCAAC	25	3.8889222E-5	45.000004	16
TCCGATA	20	7.031014E-4	45.000004	14
CCGATAG	20	7.031014E-4	45.000004	12
CCGATAA	20	7.031014E-4	45.000004	15
TTTCGCA	25	3.8889222E-5	45.000004	14
AGCTTCG	20	7.031014E-4	45.000004	23
GACCGCG	20	7.031014E-4	45.000004	10
GGCCGAA	25	3.8889222E-5	45.000004	10
CGCGCAT	30	2.1640353E-6	45.000004	36
TATGCGT	20	7.031014E-4	45.000004	31
GCGTTAT	20	7.031014E-4	45.000004	41
GTTCGAA	20	7.031014E-4	45.000004	8
TGATTCC	20	7.031014E-4	45.000004	16
CGTAGAT	20	7.031014E-4	45.000004	30
CGAATCG	20	7.031014E-4	45.000004	38
TCCGTCG	20	7.031014E-4	45.000004	1