##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933983.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2062189 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.56509369412794 34.0 31.0 34.0 31.0 34.0 2 32.79519142037903 34.0 31.0 34.0 31.0 34.0 3 32.843388263636356 34.0 31.0 34.0 31.0 34.0 4 36.16736681264423 37.0 35.0 37.0 35.0 37.0 5 36.20683312732247 37.0 35.0 37.0 35.0 37.0 6 35.867399641836904 37.0 35.0 37.0 35.0 37.0 7 36.18161526416832 37.0 36.0 37.0 35.0 37.0 8 36.1933203018734 37.0 37.0 37.0 35.0 37.0 9 38.0618124720867 39.0 39.0 39.0 37.0 39.0 10 37.71028067747427 39.0 38.0 39.0 35.0 39.0 11 37.63824120873499 39.0 37.0 39.0 35.0 39.0 12 37.58556029539484 39.0 37.0 39.0 35.0 39.0 13 37.6039688893695 39.0 37.0 39.0 35.0 39.0 14 38.926811751978114 40.0 38.0 41.0 35.0 41.0 15 38.974417475798774 40.0 38.0 41.0 35.0 41.0 16 39.014794958173084 40.0 38.0 41.0 35.0 41.0 17 38.97641777742001 40.0 38.0 41.0 35.0 41.0 18 38.909221705672955 40.0 38.0 41.0 35.0 41.0 19 38.9194166974996 40.0 38.0 41.0 35.0 41.0 20 38.889065939154946 40.0 38.0 41.0 35.0 41.0 21 38.8233120242616 40.0 38.0 41.0 35.0 41.0 22 38.80711903710087 40.0 38.0 41.0 35.0 41.0 23 38.7475890910096 40.0 38.0 41.0 35.0 41.0 24 38.72644602410352 40.0 38.0 41.0 35.0 41.0 25 38.65474260603659 40.0 38.0 41.0 35.0 41.0 26 38.58155581277953 40.0 38.0 41.0 35.0 41.0 27 38.5730013107431 40.0 38.0 41.0 35.0 41.0 28 38.4995856344884 40.0 38.0 41.0 35.0 41.0 29 38.465624634793414 40.0 38.0 41.0 34.0 41.0 30 38.40654081657889 40.0 38.0 41.0 34.0 41.0 31 38.37352395924913 40.0 38.0 41.0 34.0 41.0 32 38.297472734070446 40.0 38.0 41.0 34.0 41.0 33 38.23679109916695 40.0 38.0 41.0 34.0 41.0 34 38.235369309020655 40.0 38.0 41.0 34.0 41.0 35 38.18276743790215 40.0 38.0 41.0 34.0 41.0 36 38.07857039291743 40.0 37.0 41.0 34.0 41.0 37 38.02764974500398 40.0 37.0 41.0 34.0 41.0 38 37.99112205525294 40.0 37.0 41.0 34.0 41.0 39 37.947685687393346 40.0 37.0 41.0 34.0 41.0 40 37.865475472907676 40.0 37.0 41.0 33.0 41.0 41 37.782022889269605 40.0 37.0 41.0 33.0 41.0 42 37.75620808761951 40.0 37.0 41.0 33.0 41.0 43 37.671369598033934 40.0 37.0 41.0 33.0 41.0 44 37.56748823701416 40.0 36.0 41.0 33.0 41.0 45 37.55341872156238 40.0 36.0 41.0 33.0 41.0 46 37.484532698021376 40.0 36.0 41.0 33.0 41.0 47 37.424997417792454 40.0 36.0 41.0 33.0 41.0 48 37.366242376426214 40.0 36.0 41.0 33.0 41.0 49 37.322597977198015 39.0 36.0 41.0 33.0 41.0 50 37.256105526700026 39.0 35.0 41.0 33.0 41.0 51 36.40999733778039 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 14.0 10 44.0 11 35.0 12 27.0 13 23.0 14 26.0 15 33.0 16 61.0 17 103.0 18 226.0 19 379.0 20 624.0 21 1150.0 22 1765.0 23 2785.0 24 4154.0 25 6226.0 26 8879.0 27 11242.0 28 13183.0 29 15681.0 30 19860.0 31 24873.0 32 33146.0 33 47089.0 34 85750.0 35 119411.0 36 127279.0 37 209860.0 38 439794.0 39 887860.0 40 605.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.436395985043077 4.373120019552039 57.460106711848425 16.730377283556454 2 18.71913777059232 4.174447637922615 55.90103525913484 21.205379332350237 3 20.185249751598906 4.047398177373655 53.75283254832608 22.014519522701363 4 18.502571781732907 4.666546082827519 52.88622914776483 23.944652987674747 5 18.585299407571277 5.316922939652962 51.862753607937975 24.23502404483779 6 21.734768248691076 6.048960594785444 53.651580917171025 18.564690239352455 7 86.86497697349758 1.7620111444683295 7.598721552680186 3.7742903293539047 8 89.15400091844153 2.3287390244056194 5.175713768233658 3.341546288919202 9 83.9207269556767 5.198505083675648 6.918231064175011 3.962536896472632 10 34.96250828609793 40.09923435727763 13.143557646753038 11.794699709871404 11 25.34428221661545 26.518568375643554 29.62691586464674 18.510233543094255 12 25.52302432027326 22.985526544851126 31.112521694180312 20.3789274406953 13 24.2914689196771 22.174252699437346 32.33457263131555 21.199705749569997 14 20.051120435614777 25.57626871251859 31.149909149937276 23.222701701929356 15 17.82479685421656 27.157840527711087 34.25461972690185 20.7627428911705 16 21.544145565707122 26.254916498924203 32.232884570715875 19.968053364652803 17 21.308037236160217 26.179511189323577 29.606064235625347 22.90638733889086 18 20.989637710219576 27.023468750924383 30.27394676239666 21.712946776459383 19 23.160534752149296 26.887690701482747 29.758669064765648 20.193105481602316 20 25.56264241541391 27.041313865993853 29.32592502433094 18.070118694261293 21 25.794240974032935 25.94723374045735 28.861418618759 19.39710666675072 22 23.921619211430183 24.796417787118447 29.116923812511853 22.16503918893952 23 22.441783948997884 26.474101064451418 29.39648111788008 21.687633868670623 24 22.42709082436188 24.411874954235525 30.573870775181128 22.587163446221467 25 22.037359330303865 26.94030469564138 28.041755629576144 22.98058034447861 26 21.65732626834883 29.168422486978642 27.992439102332522 21.18181214234001 27 21.604760766350708 27.983710513439846 29.645342885642396 20.766185834567054 28 20.587831668193363 27.741734632470642 30.86429032450469 20.806143374831308 29 21.319044956597093 25.931376803968988 30.457489589945443 22.29208864948848 30 22.421950655347302 26.36930950557878 29.71289246523961 21.49584737383431 31 22.49216730377284 27.82189217380172 27.713803148014076 21.972137374411364 32 22.25741675472035 28.523961673736014 27.895697242105356 21.32292432943828 33 21.987557881455093 27.794397118789792 28.313699665743535 21.904345334011577 34 22.389509399962858 26.26941565491815 28.982455051404116 22.35861989371488 35 21.989061138431058 25.27479295059764 28.847113431407113 23.88903247956419 36 21.59903869140995 27.115167426458004 29.41224107004741 21.873552812084636 37 22.058016990683203 27.928671911255464 29.554420084677012 20.45889101338432 38 21.347170409695718 27.415188423563503 28.225734886569565 23.011906280171214 39 21.76609418438368 27.2547278644198 28.39599086213727 22.583187089059248 40 22.95449156212161 25.69953578454739 29.561742400914753 21.784230252416243 41 20.508934923035667 25.778481021865602 29.979793316713454 23.73279073838528 42 21.16799187659327 25.692940850717367 29.496617429343285 23.642449843346075 43 21.94430287427583 25.604103212654127 29.87902660716355 22.572567305906492 44 21.781951120872044 25.966388143860726 28.844009933134164 23.407650802133073 45 22.372343175140593 25.151622862889873 27.94297709860735 24.533056863362184 46 22.351734006921774 25.869549299312528 28.3259681823538 23.452748511411905 47 20.726179802142287 25.784154604645842 30.629782236254776 22.8598833569571 48 20.72550091189508 24.53698472836389 31.01272482784071 23.724789531900324 49 21.122118292746205 25.236678112432955 30.727542431852754 22.913661162968086 50 20.728652902328545 25.436805258877826 29.152226105366672 24.682315733426954 51 19.82073418100863 24.549932135221358 28.283925479187406 27.345408204582604 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 307.0 1 1226.0 2 2145.0 3 4709.0 4 7273.0 5 5051.0 6 2829.0 7 2784.0 8 2739.0 9 2742.0 10 2745.0 11 2708.5 12 2672.0 13 2786.5 14 2901.0 15 3084.5 16 3268.0 17 3817.5 18 4367.0 19 5028.0 20 5689.0 21 6283.0 22 6877.0 23 9429.5 24 11982.0 25 15173.5 26 23566.0 27 28767.0 28 32165.5 29 35564.0 30 40799.5 31 46035.0 32 53919.5 33 61804.0 34 68462.0 35 75120.0 36 80396.0 37 85672.0 38 92227.0 39 98782.0 40 107404.5 41 116027.0 42 123241.5 43 130456.0 44 139176.5 45 147897.0 46 157925.0 47 167953.0 48 185558.5 49 203164.0 50 193203.5 51 183243.0 52 161015.5 53 138788.0 54 121409.5 55 104031.0 56 94708.0 57 85385.0 58 83033.5 59 80682.0 60 76346.0 61 72010.0 62 61367.5 63 50725.0 64 40603.5 65 30482.0 66 24261.5 67 18041.0 68 14350.5 69 10660.0 70 9206.5 71 7753.0 72 5957.0 73 4161.0 74 3435.0 75 1908.0 76 1107.0 77 879.0 78 651.0 79 439.5 80 228.0 81 143.5 82 59.0 83 44.5 84 30.0 85 23.5 86 17.0 87 15.5 88 14.0 89 11.0 90 8.0 91 5.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2062189.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.13631827178098 #Duplication Level Percentage of deduplicated Percentage of total 1 69.35160671807775 17.43244059124986 2 12.129996820540928 6.098069214336163 3 4.699216016636163 3.5436296826605234 4 2.303113201550153 2.315671458004204 5 1.3297345671347545 1.6712315648244052 6 0.8655992519212165 1.3054786975264332 7 0.6008640731729573 1.0572457406947906 8 0.47927911429256204 0.9637849886300105 9 0.38203934243661847 0.8642756253445886 >10 6.923367276599111 46.39235345967251 >50 0.849624723034668 12.854589024733713 >100 0.08066424750213001 3.54391608131775 >500 0.0027410023765818098 0.46979076266252684 >1k 0.0019578588404155785 1.1990835881282702 >5k 1.957858840415578E-4 0.2884395202142332 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC 5861 0.2842125527776552 No Hit CTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGCT 4671 0.22650688176495945 No Hit TCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC 4316 0.20929216478218052 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3661 0.1775297996449404 No Hit GCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC 3549 0.1720986776672749 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9396864205948147E-4 0.0 0.0 0.23795103164646889 0.0 2 1.9396864205948147E-4 0.0 0.0 0.9565563583163328 0.0 3 1.9396864205948147E-4 0.0 0.0 1.4253300740135846 0.0 4 1.9396864205948147E-4 0.0 0.0 1.9179619326841526 0.0 5 1.9396864205948147E-4 0.0 0.0 2.709790421731471 0.0 6 1.9396864205948147E-4 0.0 0.0 3.2567335001786937 0.0 7 1.9396864205948147E-4 0.0 0.0 3.737242318720544 0.0 8 1.9396864205948147E-4 0.0 0.0 4.496144630778265 0.0 9 1.9396864205948147E-4 0.0 0.0 4.836753566234715 0.0 10 1.9396864205948147E-4 0.0 0.0 5.515789289924444 0.0 11 1.9396864205948147E-4 0.0 0.0 6.897524911635161 0.0 12 1.9396864205948147E-4 0.0 0.0 8.239739422526258 0.0 13 1.9396864205948147E-4 0.0 0.0 8.634708069919876 0.0 14 1.9396864205948147E-4 0.0 0.0 8.77422001572116 0.0 15 1.9396864205948147E-4 0.0 0.0 8.975510974018386 0.0 16 1.9396864205948147E-4 0.0 0.0 9.458929322191128 0.0 17 1.9396864205948147E-4 0.0 0.0 10.203962876341595 0.0 18 1.9396864205948147E-4 0.0 0.0 10.94506856549036 0.0 19 1.9396864205948147E-4 0.0 0.0 11.53259958228853 0.0 20 1.9396864205948147E-4 0.0 0.0 12.181327705656464 0.0 21 2.4246080257435182E-4 0.0 0.0 13.075862590674278 0.0 22 2.4246080257435182E-4 0.0 0.0 14.110733788222127 0.0 23 2.4246080257435182E-4 0.0 0.0 15.044838276220075 0.0 24 2.4246080257435182E-4 0.0 0.0 15.7199461349081 0.0 25 2.4246080257435182E-4 0.0 0.0 16.323528056836693 0.0 26 3.394451236040925E-4 0.0 0.0 16.858493571636743 0.0 27 3.394451236040925E-4 0.0 0.0 17.38904629982994 0.0 28 3.394451236040925E-4 0.0 0.0 17.951458377481405 0.0 29 3.394451236040925E-4 0.0 0.0 18.548639334222035 0.0 30 3.394451236040925E-4 0.0 0.0 19.241349847176956 0.0 31 3.394451236040925E-4 0.0 0.0 19.880476522762947 0.0 32 3.394451236040925E-4 0.0 0.0 20.49821815556188 0.0 33 4.364294446338333E-4 0.0 0.0 21.059854358645108 0.0 34 4.8492160514870364E-4 0.0 0.0 21.64340901828106 0.0 35 4.8492160514870364E-4 0.0 0.0 22.25741675472035 0.0 36 4.8492160514870364E-4 0.0 0.0 22.8859721393141 0.0 37 5.33413765663574E-4 0.0 0.0 23.514527523907848 0.0 38 5.819059261784443E-4 0.0 0.0 24.095851544160112 0.0 39 5.819059261784443E-4 0.0 0.0 24.67557532311539 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACGT 20 7.0345897E-4 45.000004 23 CGCGCAT 25 3.8918883E-5 45.0 36 TTATCCG 60 3.6379788E-12 41.249996 1 TTTCGCG 580 0.0 39.181038 1 TTGGGAC 6070 0.0 39.069195 5 TTTGGGA 17510 0.0 38.832096 4 CGTAACC 140 0.0 38.571426 35 TTTTGCG 1830 0.0 38.360657 1 TACGGGA 440 0.0 38.352272 4 CGTTTTT 2175 0.0 38.172417 1 TCTTACG 95 0.0 37.894737 1 TTGGGAT 11105 0.0 37.807293 5 TCGTTTG 680 0.0 37.72059 1 GCTACGA 215 0.0 37.67442 10 TTCGGGA 3280 0.0 37.66006 4 TTGTTCG 540 0.0 37.5 1 TAGCGCG 30 1.1402365E-4 37.499996 1 CGGCACG 30 1.1402365E-4 37.499996 13 ATATCGC 30 1.1402365E-4 37.499996 45 CGCACGA 30 1.1402365E-4 37.499996 40 >>END_MODULE