##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933975.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 796479 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.386194739597656 33.0 31.0 34.0 31.0 34.0 2 32.616114172501725 34.0 31.0 34.0 31.0 34.0 3 32.66985319135846 34.0 31.0 34.0 31.0 34.0 4 36.04803767582071 37.0 35.0 37.0 35.0 37.0 5 36.099889639274856 37.0 35.0 37.0 35.0 37.0 6 35.73394025454532 37.0 35.0 37.0 35.0 37.0 7 36.050163281141124 37.0 35.0 37.0 35.0 37.0 8 36.055363669349724 37.0 36.0 37.0 35.0 37.0 9 37.924775166702446 39.0 38.0 39.0 35.0 39.0 10 37.57087129729723 39.0 37.0 39.0 35.0 39.0 11 37.497788391156575 39.0 37.0 39.0 35.0 39.0 12 37.363625406319564 39.0 37.0 39.0 35.0 39.0 13 37.300665805375914 39.0 37.0 39.0 34.0 39.0 14 38.511508778009215 40.0 38.0 41.0 34.0 41.0 15 38.572827406623404 40.0 38.0 41.0 35.0 41.0 16 38.61665153757977 40.0 38.0 41.0 35.0 41.0 17 38.602490461142104 40.0 38.0 41.0 35.0 41.0 18 38.56488620541157 40.0 38.0 41.0 35.0 41.0 19 38.59609230124084 40.0 38.0 41.0 35.0 41.0 20 38.549506013341215 40.0 38.0 41.0 34.0 41.0 21 38.47364211736907 40.0 38.0 41.0 34.0 41.0 22 38.45457067920184 40.0 38.0 41.0 34.0 41.0 23 38.417626830085915 40.0 38.0 41.0 34.0 41.0 24 38.392390759831706 40.0 37.0 41.0 34.0 41.0 25 38.30810981833796 40.0 37.0 41.0 34.0 41.0 26 38.255567315647994 40.0 37.0 41.0 34.0 41.0 27 38.22128015930112 40.0 37.0 41.0 34.0 41.0 28 38.09185427362178 40.0 37.0 41.0 34.0 41.0 29 38.10709133574143 40.0 37.0 41.0 34.0 41.0 30 38.02247140225919 40.0 37.0 41.0 34.0 41.0 31 37.91028639800924 40.0 37.0 41.0 34.0 41.0 32 37.827161795854 40.0 36.0 41.0 33.0 41.0 33 37.797419643204655 40.0 37.0 41.0 33.0 41.0 34 37.77993518975391 40.0 37.0 41.0 33.0 41.0 35 37.74091721187878 40.0 37.0 41.0 33.0 41.0 36 37.645329004280086 40.0 36.0 41.0 33.0 41.0 37 37.48984216784121 40.0 36.0 41.0 33.0 41.0 38 37.41846552137596 40.0 36.0 41.0 33.0 41.0 39 37.454054658063804 40.0 36.0 41.0 33.0 41.0 40 37.37733574896513 40.0 36.0 41.0 33.0 41.0 41 37.26659083290332 39.0 35.0 41.0 32.0 41.0 42 37.25435573317062 39.0 35.0 41.0 32.0 41.0 43 37.162623245559516 39.0 35.0 41.0 32.0 41.0 44 37.037781284880076 39.0 35.0 41.0 32.0 41.0 45 37.04639042586182 39.0 35.0 41.0 32.0 41.0 46 36.9439056145862 39.0 35.0 41.0 32.0 41.0 47 36.842177885418195 39.0 35.0 41.0 31.0 41.0 48 36.79578997060814 39.0 35.0 41.0 31.0 41.0 49 36.78830578081782 39.0 35.0 41.0 31.0 41.0 50 36.706414105079986 39.0 35.0 41.0 31.0 41.0 51 35.79384264996315 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 15.0 10 16.0 11 16.0 12 6.0 13 11.0 14 9.0 15 25.0 16 33.0 17 45.0 18 93.0 19 178.0 20 280.0 21 461.0 22 819.0 23 1158.0 24 1822.0 25 2706.0 26 3833.0 27 4915.0 28 6036.0 29 7116.0 30 9245.0 31 12226.0 32 16146.0 33 22833.0 34 43593.0 35 57613.0 36 57034.0 37 92523.0 38 181033.0 39 274460.0 40 178.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.94546246668148 4.79523000606419 55.78841375604379 17.47089377121054 2 19.120780334446984 4.353536000321415 53.633303577369894 22.892380087861703 3 19.61169095481488 4.333698691365371 53.36499769611001 22.689612657709745 4 19.069429325820266 4.483734034418987 52.93159016119697 23.51524647856378 5 18.39332863766653 5.524690544257915 51.60387153961372 24.47810927846183 6 21.04562706612478 6.281772651884104 53.16273247631137 19.509867805679747 7 81.97152718401867 2.400942146622824 9.913255716723228 5.714274952635287 8 82.81674720865207 2.9944292316558254 8.27228338725817 5.916540172433924 9 77.56086475600738 5.0337799238900205 11.16149954989397 6.24385577020863 10 36.74158389612281 29.446350751243912 19.134716671751548 14.67734868088173 11 25.275117109176765 25.591384079178486 28.83214748913656 20.30135132250819 12 24.842211784617046 22.083695866432134 31.348974674787407 21.72511767416341 13 23.144489685227107 23.24154183600572 32.57072691182065 21.043241566946524 14 18.933706977836202 26.004954305135474 30.741676805038175 24.319661911990146 15 17.451809777784476 26.05002768434573 34.66067529715159 21.83748724071821 16 19.556698921126607 25.954482164627063 31.061459247513117 23.42735966673321 17 20.10373154847774 26.05153431540568 29.01896974057069 24.825764395545896 18 20.306498978629694 25.12884834377303 31.941206233937113 22.623446443660157 19 21.194281330706772 25.800931349100225 30.03067249732887 22.97411482286413 20 22.856346495011167 26.527629730350704 30.23030111277259 20.385722661865536 21 23.505202271497428 26.788904666664155 29.89733564852306 19.808557413315352 22 22.143082240711934 24.413073037707207 29.426011231934552 24.017833489646307 23 21.412617281811574 25.236195806794655 28.57802905035789 24.773157861035884 24 21.330003678690836 23.917516971571125 30.23080332312591 24.521676026612127 25 20.086530843876613 26.219272573413736 27.952777160477556 25.7414194222321 26 21.57470567334481 27.243907246769844 27.149993910699465 24.03139316918588 27 22.108178621156366 26.86787724472334 28.96937646818058 22.054567665939718 28 18.68297845894242 25.084528280092762 32.58039446112201 23.652098799842808 29 20.772047976155054 22.354889457223607 29.946803368324844 26.926259198296503 30 21.7391795640563 25.003923518385296 27.98730412226813 25.26959279529027 31 20.97468985371868 28.956821209347645 26.635479403725647 23.433009533208033 32 21.244879023803513 28.18994599983176 25.921336281308104 24.64383869505662 33 21.337160176225613 25.980722655587908 28.04882489054953 24.63329227763695 34 19.459521217759665 25.012461094391693 29.739892702758013 25.788124985090633 35 21.491338754694098 24.82350444895597 27.588297996557348 26.09685879979259 36 23.612173076754065 25.55535048632795 27.923146749631815 22.909329687286167 37 20.365885352909494 26.947477585724165 30.80194204743628 21.88469501393006 38 18.67845856576256 26.370437889762314 29.78496608196826 25.16613746250686 39 19.206783857452614 24.18218182776947 30.179326761910865 26.431707552867056 40 21.219015190607664 25.889445923872444 28.317632982162742 24.57390590335715 41 19.04595099180267 27.55515211323839 27.855097246757293 25.54379964820165 42 21.07224421485061 24.411943064412245 29.428145625936153 25.08766709480099 43 22.37648450241626 22.52526431958658 30.426916466096404 24.67133471190075 44 20.94543610063793 22.193052170867027 29.043201390118256 27.81831033837678 45 21.64363404433764 22.954528619084748 27.021302507661847 28.380534828915767 46 22.525766529939897 23.905212817914848 29.20353204541488 24.365488606730374 47 18.765592062063156 24.217838762855017 32.288233588079535 24.72833558700229 48 18.62208545360267 22.874802725495588 32.67958100590222 25.82353081499952 49 20.769285819211806 21.5135615628284 32.75240150713327 24.964751110826526 50 20.96816111912555 21.925625157725438 29.458152694546875 27.648061028602132 51 18.96722951892015 22.291610952705597 27.633622480944254 31.10753704743 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 116.0 1 420.5 2 725.0 3 1709.0 4 2693.0 5 1879.5 6 1066.0 7 1089.0 8 1112.0 9 1260.5 10 1409.0 11 1318.5 12 1228.0 13 1213.0 14 1198.0 15 1234.5 16 1271.0 17 1319.0 18 1367.0 19 1631.5 20 1896.0 21 2006.0 22 2116.0 23 2512.5 24 2909.0 25 3398.0 26 5617.0 27 7347.0 28 8706.5 29 10066.0 30 12219.0 31 14372.0 32 16120.5 33 17869.0 34 19339.5 35 20810.0 36 22584.5 37 24359.0 38 26822.0 39 29285.0 40 32701.0 41 36117.0 42 41219.0 43 46321.0 44 52995.0 45 59669.0 46 68025.0 47 76381.0 48 89713.0 49 103045.0 50 98916.0 51 94787.0 52 79435.0 53 64083.0 54 53671.0 55 43259.0 56 37305.5 57 31352.0 58 30062.5 59 28773.0 60 25004.5 61 21236.0 62 18541.0 63 15846.0 64 12628.0 65 9410.0 66 8169.5 67 6929.0 68 5924.0 69 4919.0 70 3947.5 71 2976.0 72 2596.0 73 2216.0 74 1651.0 75 749.5 76 413.0 77 352.5 78 292.0 79 191.5 80 91.0 81 119.0 82 147.0 83 79.0 84 11.0 85 10.0 86 9.0 87 8.0 88 7.0 89 4.0 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 796479.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.727158354098908 #Duplication Level Percentage of deduplicated Percentage of total 1 66.8275997800647 19.86594641086329 2 13.58839653702477 8.078888312688493 3 5.821819870351982 5.191984835849789 4 2.9107024016208305 3.461076448585537 5 1.6960468717958748 2.520932696692503 6 1.068930352150601 1.906575710873018 7 0.7614481446818707 1.5844982702774952 8 0.5421509641014103 1.2893286049336015 9 0.43229456455638227 1.156580007856543 >10 6.034926575074005 42.825758458620484 >50 0.24306381769852423 4.460694754326552 >100 0.06493093160951278 3.4290471683688977 >500 0.0038445946347737832 0.7521477753675139 >1k 0.0029902402714907204 1.930847024221349 >5k 8.54354363283063E-4 1.5456935204749924 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGC 6502 0.8163429293176594 No Hit CTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGCT 5670 0.7118831758276113 No Hit TCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGC 4430 0.5561979662991742 No Hit GCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGC 3647 0.457890289637266 No Hit TCCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTG 1850 0.2322722884093617 No Hit CGCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTG 1556 0.1953598274405226 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1469 0.18443675225586612 No Hit GCCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTG 1144 0.1436321610488161 No Hit TGCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTG 1109 0.13923782045728764 No Hit TTCCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCT 950 0.11927495891291547 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.7489211893847798 0.0 2 0.0 0.0 0.0 2.7444540282920205 0.0 3 0.0 0.0 0.0 3.91987736023172 0.0 4 0.0 0.0 0.0 5.003145092337651 0.0 5 0.0 0.0 0.0 6.631436610381441 0.0 6 0.0 0.0 0.0 7.564417894257099 0.0 7 0.0 0.0 0.0 8.479570710589984 0.0 8 0.0 0.0 0.0 9.87395775657613 0.0 9 0.0 0.0 0.0 10.481506731502023 0.0 10 0.0 0.0 0.0 11.719706357606416 0.0 11 0.0 0.0 0.0 14.168358487794405 0.0 12 0.0 0.0 0.0 16.39139261675449 0.0 13 0.0 0.0 0.0 17.131148467191224 0.0 14 0.0 0.0 0.0 17.376854882551832 0.0 15 0.0 0.0 0.0 17.774228824614333 0.0 16 0.0 0.0 0.0 18.714868816378083 0.0 17 0.0 0.0 0.0 19.96662812202205 0.0 18 0.0 0.0 0.0 21.338666807285566 0.0 19 0.0 0.0 0.0 22.291234294940608 0.0 20 0.0 0.0 0.0 23.317501151945 0.0 21 1.2555258832938471E-4 0.0 0.0 24.748172895958337 0.0 22 6.277629416469235E-4 0.0 0.0 26.193283187629554 0.0 23 6.277629416469235E-4 0.0 0.0 27.43286389220557 0.0 24 6.277629416469235E-4 0.0 0.0 28.475829243457767 0.0 25 6.277629416469235E-4 0.0 0.0 29.41785031369314 0.0 26 6.277629416469235E-4 0.0 0.0 30.192635336273774 0.0 27 6.277629416469235E-4 0.0 0.0 30.99102424546033 0.0 28 6.277629416469235E-4 0.0 0.0 31.788032076175266 0.0 29 6.277629416469235E-4 0.0 0.0 32.6085182409078 0.0 30 6.277629416469235E-4 0.0 0.0 33.60854460695135 0.0 31 6.277629416469235E-4 0.0 0.0 34.480507332898924 0.0 32 6.277629416469235E-4 0.0 0.0 35.28077953091042 0.0 33 6.277629416469235E-4 0.0 0.0 36.042632636893124 0.0 34 6.277629416469235E-4 0.0 0.0 36.78238848732986 0.0 35 6.277629416469235E-4 0.0 0.0 37.61467659536535 0.0 36 6.277629416469235E-4 0.0 0.0 38.37025207193159 0.0 37 7.533155299763082E-4 0.0 0.0 39.1159088940198 0.0 38 7.533155299763082E-4 0.0 0.0 39.85390700821993 0.0 39 7.533155299763082E-4 0.0 0.0 40.67301209448083 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTTAG 30 2.1646592E-6 45.000004 1 TAATACG 20 7.031982E-4 45.0 36 CGTCTAT 20 7.031982E-4 45.0 21 TCTAGCG 45 3.8380676E-10 45.0 1 TATTGCG 40 6.8102963E-9 45.0 1 GCGCTTA 25 3.8897233E-5 45.0 16 CGTCCGA 20 7.031982E-4 45.0 13 CGATAAG 20 7.031982E-4 45.0 32 CGAATAT 100 0.0 42.75 14 CATTTCG 55 6.002665E-11 40.909092 13 TTTTTCG 365 0.0 40.684933 1 TTCGCAG 50 1.0804797E-9 40.5 1 TTGGGCA 910 0.0 40.3022 5 CTTGTTG 430 0.0 40.2907 1 TCGTTTG 275 0.0 40.090908 1 TTTGGGC 1800 0.0 40.000004 4 TTCTGCG 295 0.0 39.66102 1 CGTTTGG 460 0.0 39.619564 2 CGGGAAT 325 0.0 39.46154 6 TTGTGCG 160 0.0 39.375 1 >>END_MODULE