##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933972.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 262543 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.40039917270695 33.0 31.0 34.0 31.0 34.0 2 32.626765901204756 34.0 31.0 34.0 31.0 34.0 3 32.698575090556595 34.0 31.0 34.0 31.0 34.0 4 36.07259763162606 37.0 35.0 37.0 35.0 37.0 5 36.110964680071454 37.0 35.0 37.0 35.0 37.0 6 35.72146657880804 37.0 35.0 37.0 35.0 37.0 7 36.04508594782569 37.0 35.0 37.0 35.0 37.0 8 36.01709053374114 37.0 35.0 37.0 35.0 37.0 9 37.839028273463775 39.0 38.0 39.0 35.0 39.0 10 37.639053412202955 39.0 37.0 39.0 35.0 39.0 11 37.62664401640874 39.0 37.0 39.0 35.0 39.0 12 37.408546409540534 39.0 37.0 39.0 35.0 39.0 13 37.25014949932011 39.0 37.0 39.0 34.0 39.0 14 38.38530069360067 40.0 38.0 41.0 34.0 41.0 15 38.44786568295479 40.0 38.0 41.0 34.0 41.0 16 38.53848702879147 40.0 38.0 41.0 35.0 41.0 17 38.542673009754594 40.0 38.0 41.0 35.0 41.0 18 38.52963514548093 40.0 38.0 41.0 35.0 41.0 19 38.572732847571636 40.0 38.0 41.0 35.0 41.0 20 38.507829193693986 40.0 38.0 41.0 35.0 41.0 21 38.42629969186 40.0 37.0 41.0 34.0 41.0 22 38.43173499198227 40.0 37.0 41.0 34.0 41.0 23 38.366789440205984 40.0 37.0 41.0 34.0 41.0 24 38.34419123724495 40.0 37.0 41.0 34.0 41.0 25 38.26170189264235 40.0 37.0 41.0 34.0 41.0 26 38.18263674902778 40.0 37.0 41.0 34.0 41.0 27 38.11459456165276 40.0 37.0 41.0 34.0 41.0 28 38.085658349298974 40.0 37.0 41.0 34.0 41.0 29 38.02232777106988 40.0 36.0 41.0 34.0 41.0 30 37.97239690260262 40.0 36.0 41.0 34.0 41.0 31 37.81203840894634 40.0 36.0 41.0 34.0 41.0 32 37.4844311217591 40.0 35.0 41.0 33.0 41.0 33 37.50258433856549 39.0 36.0 41.0 33.0 41.0 34 37.477685560079685 39.0 35.0 41.0 33.0 41.0 35 37.36187595936666 39.0 35.0 41.0 33.0 41.0 36 37.35159192970294 39.0 35.0 41.0 33.0 41.0 37 37.2525871952404 39.0 35.0 41.0 33.0 41.0 38 37.19895788499408 39.0 35.0 41.0 33.0 41.0 39 37.25488015296542 39.0 35.0 41.0 33.0 41.0 40 37.121835280315985 39.0 35.0 41.0 32.0 41.0 41 37.00481444944257 39.0 35.0 41.0 32.0 41.0 42 36.92496848135353 39.0 35.0 41.0 32.0 41.0 43 36.89254712561371 39.0 35.0 41.0 32.0 41.0 44 36.82790628582747 39.0 35.0 41.0 32.0 41.0 45 36.89118734835817 39.0 35.0 41.0 32.0 41.0 46 36.831075290523835 39.0 35.0 41.0 32.0 41.0 47 36.689898416640325 39.0 35.0 40.0 31.0 41.0 48 36.61964706733754 39.0 35.0 40.0 31.0 41.0 49 36.71563515309873 39.0 35.0 40.0 32.0 41.0 50 36.599928392682344 39.0 35.0 40.0 31.0 41.0 51 35.61452028810519 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 15.0 10 22.0 11 25.0 12 12.0 13 9.0 14 7.0 15 10.0 16 10.0 17 15.0 18 37.0 19 57.0 20 130.0 21 226.0 22 358.0 23 521.0 24 754.0 25 967.0 26 1311.0 27 1485.0 28 1787.0 29 2142.0 30 2767.0 31 3662.0 32 5080.0 33 7685.0 34 15663.0 35 22351.0 36 19547.0 37 31314.0 38 63466.0 39 81055.0 40 48.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.40324061201403 4.335289838236022 53.075115314443735 18.186354235306215 2 18.335282220436273 6.77793732836145 51.82236814540856 23.06441230579372 3 20.859440167896306 6.5086481071672075 50.23139066743353 22.40052105750296 4 19.752192974103288 3.633309591190776 52.05394925783586 24.560548176870075 5 18.935183950819486 5.826855029461841 50.06798886277677 25.16997215694191 6 20.843061898431873 7.208343014287183 52.185356303538846 19.763238783742093 7 76.77332855951215 2.039284993315381 14.611701702197355 6.575684744975109 8 75.5750486586959 4.77064709399984 10.956681381716518 8.697622865587732 9 68.40289019322549 6.587873224576546 15.319776189043319 9.689460393154645 10 32.4072628102825 30.78238612341597 21.74539027892574 15.064960787375783 11 27.475118361563627 25.62551658204561 27.95427796589511 18.94508709049565 12 25.866619944161528 20.868962417584928 34.521583131144226 18.74283450710931 13 24.83555074787749 26.221990302540917 30.994160956490934 17.948297993090655 14 17.44552320953139 29.72275017806607 30.92826698864567 21.90345962375687 15 14.103975348800008 26.302358089912893 39.358124192989344 20.235542368297764 16 16.770967041589376 27.067566074890586 30.251044590790844 25.91042229272919 17 17.234129266443972 25.044659351039638 28.288318484971985 29.432892897544406 18 18.895571392114814 23.56452085944017 32.7287339597704 24.81117378867462 19 20.68613522356338 24.281355815999664 31.772700091032707 23.25980886940425 20 23.638413517023878 24.141188300583142 32.777487878176146 19.442910304216834 21 22.414613987042124 26.931969239324605 30.811714652456928 19.84170212117634 22 19.54536971086641 24.328586174455232 29.379187409300574 26.746856705377787 23 18.939754630670024 25.682650080177343 29.541065654007152 25.83652963514548 24 22.4313731464941 22.348720019196854 28.969349782702263 26.250557051606783 25 17.69272081144803 26.37015650769588 29.520878484667275 26.416244196188813 26 17.17394864841188 27.849533219320264 30.85589789101214 24.12062024125572 27 19.447480984067372 30.686782736542206 28.113109090701332 21.752627188689093 28 17.69424437139821 27.228301649634535 32.670838681663575 22.40661529730368 29 18.623235051020217 28.38849255169629 29.96461532015708 23.023657077126416 30 24.426474901254274 28.186239968309952 26.6824862974827 20.704798832953077 31 27.510160240417758 28.26622686569438 24.19337022887679 20.030242665011063 32 24.55064503719391 28.835657397074005 26.33168661895385 20.282010946778243 33 28.025123503578463 25.009236582197964 25.703979919479856 21.261659994743717 34 23.793816631942196 23.064793195781263 30.29522782934605 22.846162342930494 35 20.833920538730798 23.83761898050986 29.85644256369433 25.472017917065017 36 27.60347828736626 24.07034276289979 30.04688755746678 18.279291392267172 37 24.425332231291634 27.734885333069247 29.076760759189924 18.763021676449192 38 23.818574481132615 28.75376604975185 26.2795046906602 21.14815477845534 39 27.188308200942323 25.093032379457842 28.017124813840017 19.701534605759818 40 28.43991270001485 22.689997448037083 28.004936334238582 20.86515351770948 41 22.66562048883421 22.605820760789662 27.88190886826158 26.846649882114548 42 24.055868943373085 22.390998807814338 29.59400936227589 23.959122886536683 43 26.81465512316078 23.72639910414675 26.329782169016124 23.12916360367635 44 23.458633442902688 23.378265655530715 28.019029263777746 25.144071637788855 45 23.060984295905815 24.08024590257596 26.0589693878717 26.799800413646523 46 26.658490228267368 22.952049759467975 29.825971364690734 20.563488647573923 47 21.07769013075953 22.781791935035404 34.63623101739525 21.504286916809818 48 21.871845754790645 21.366023851331022 32.81367242699291 23.948457966885424 49 24.274499796223857 18.89366694217709 34.85943255009655 21.972400711502495 50 24.37200763303535 20.127369611835014 30.219430721824615 25.28119203330502 51 21.669974061391848 19.47604773313324 27.96532377553391 30.888654429941 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 73.0 1 133.0 2 193.0 3 551.0 4 909.0 5 647.5 6 386.0 7 447.5 8 509.0 9 578.5 10 648.0 11 647.0 12 646.0 13 680.0 14 714.0 15 667.5 16 621.0 17 601.5 18 582.0 19 637.5 20 693.0 21 830.0 22 967.0 23 1081.5 24 1196.0 25 1224.0 26 1625.0 27 1998.0 28 2124.5 29 2251.0 30 2658.5 31 3066.0 32 3624.5 33 4183.0 34 5119.0 35 6055.0 36 6152.5 37 6250.0 38 7146.5 39 8043.0 40 9603.5 41 11164.0 42 14175.0 43 17186.0 44 20044.5 45 22903.0 46 28612.5 47 34322.0 48 36686.5 49 39051.0 50 35807.0 51 32563.0 52 24976.0 53 17389.0 54 14745.0 55 12101.0 56 10510.5 57 8920.0 58 8349.5 59 7779.0 60 6849.5 61 5920.0 62 5176.5 63 4433.0 64 3498.5 65 2564.0 66 2190.5 67 1817.0 68 1570.5 69 1324.0 70 1042.0 71 760.0 72 608.0 73 456.0 74 388.0 75 263.0 76 206.0 77 129.5 78 53.0 79 47.5 80 42.0 81 29.5 82 17.0 83 12.5 84 8.0 85 4.5 86 1.0 87 4.5 88 8.0 89 4.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 262543.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.779990325394316 #Duplication Level Percentage of deduplicated Percentage of total 1 72.66115665204596 24.544931687380732 2 11.837135093080159 7.997166178492667 3 4.444845355012572 4.5044049927059575 4 2.1333453606503774 2.8825754257397835 5 1.23467926528127 2.0853726818083134 6 0.818609266296075 1.659156785745573 7 0.5897143888055747 1.3944382444018693 8 0.46004487692671975 1.2432249193465452 9 0.3833707307722665 1.1655233618873861 >10 5.243158523797174 38.436751313118236 >50 0.11275609728596074 2.63652049378578 >100 0.06765365837157644 4.278156340104287 >500 0.006765365837157644 1.6271620267918019 >1k 0.006765365837157644 5.5446155486910715 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 3592 1.3681568352612714 TruSeq Adapter, Index 21 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGCT 3455 1.3159749069676205 TruSeq Adapter, Index 15 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 2847 1.084393794540323 TruSeq Adapter, Index 21 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 2280 0.8684291716023661 TruSeq Adapter, Index 21 (95% over 22bp) GAATGATACCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCG 1204 0.4585915450040565 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGC 1179 0.44906929531543405 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTC 999 0.3805090975573525 No Hit TCCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTG 914 0.34813344861603623 No Hit CGCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTG 676 0.25748163158035065 No Hit TTCCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCT 602 0.22929577250202826 No Hit CGGCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCT 570 0.21710729290059153 No Hit TTCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTG 511 0.19463478363544257 No Hit GCCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTG 491 0.18701698388454463 TruSeq Adapter, Index 21 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 474 0.18054185409628137 No Hit TGCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTG 444 0.16911515446993444 No Hit CGTTCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTC 383 0.1458808652296957 No Hit TTTCCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTC 344 0.1310261557154447 No Hit GAATGACTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCT 322 0.12264657598945697 No Hit TGCCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCT 294 0.11198165633819984 No Hit GTCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTG 277 0.10550652654993657 TruSeq Adapter, Index 21 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTC 271 0.1032211866246672 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.4165298636794734 0.0 2 0.0 0.0 0.0 5.090594683537554 0.0 3 0.0 0.0 0.0 6.809932087315221 0.0 4 0.0 0.0 0.0 8.772277303146533 0.0 5 0.0 0.0 0.0 11.653329168936136 0.0 6 0.0 0.0 0.0 12.9213119374731 0.0 7 0.0 0.0 0.0 14.153871937168388 0.0 8 0.0 0.0 0.0 15.794746003511806 0.0 9 0.0 0.0 0.0 16.618230156583873 0.0 10 0.0 0.0 0.0 18.576004692564645 0.0 11 0.0 0.0 0.0 21.081879920622526 0.0 12 0.0 0.0 0.0 24.158709240010207 0.0 13 0.0 0.0 0.0 25.07893944991868 0.0 14 0.0 0.0 0.0 25.42554933858454 0.0 15 0.0 0.0 0.0 25.991551860076253 0.0 16 0.0 0.0 0.0 27.30105163725561 0.0 17 0.0 0.0 0.0 29.342241080508717 0.0 18 0.0 0.0 0.0 32.02827727267533 0.0 19 0.0 0.0 0.0 33.309591190776366 0.0 20 0.0 0.0 0.0 34.832770250968416 0.0 21 0.0 0.0 0.0 36.11141793915663 0.0 22 7.617799750897948E-4 0.0 0.0 37.128775095889054 0.0 23 0.0011426699626346922 0.0 0.0 38.105757913941716 0.0 24 0.0011426699626346922 0.0 0.0 38.81802219065067 0.0 25 0.0011426699626346922 0.0 0.0 39.47010584932754 0.0 26 0.0011426699626346922 0.0 0.0 40.05705732013423 0.0 27 0.0011426699626346922 0.0 0.0 40.65086481071672 0.0 28 0.0011426699626346922 0.0 0.0 41.25457544097538 0.0 29 0.0011426699626346922 0.0 0.0 41.962649927821346 0.0 30 0.0011426699626346922 0.0 0.0 42.70233828363354 0.0 31 0.0011426699626346922 0.0 0.0 43.35746906221076 0.0 32 0.0011426699626346922 0.0 0.0 43.922709803727386 0.0 33 0.0015235599501795896 0.0 0.0 44.44186285675109 0.0 34 0.0015235599501795896 0.0 0.0 45.03681301729621 0.0 35 0.0015235599501795896 0.0 0.0 45.60548176870075 0.0 36 0.0015235599501795896 0.0 0.0 46.17415052010528 0.0 37 0.0015235599501795896 0.0 0.0 46.69330357312897 0.0 38 0.0015235599501795896 0.0 0.0 47.21283751614021 0.0 39 0.0015235599501795896 0.0 0.0 47.83330730585085 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTCGCG 45 3.8198777E-10 45.000004 1 CGTTCTG 45 3.8198777E-10 45.000004 1 GCTACGA 30 2.1590804E-6 45.000004 10 ATCCTTC 20 7.0233323E-4 45.0 26 GTTTGCG 40 6.7811925E-9 45.0 1 CTTCGCG 20 7.0233323E-4 45.0 1 TACCCTA 20 7.0233323E-4 45.0 9 GTATTGC 35 1.207136E-7 45.0 11 CGCGGGC 50 2.1827873E-11 45.0 4 ACGTTAC 20 7.0233323E-4 45.0 38 GCGCGAC 20 7.0233323E-4 45.0 9 CTTCACG 25 3.8825572E-5 45.0 1 AGTGGCA 20 7.0233323E-4 45.0 19 CGCGACC 20 7.0233323E-4 45.0 10 CGTTCGG 25 3.8825572E-5 45.0 2 GCTTGCG 25 3.8825572E-5 45.0 1 AGTATCC 25 3.8825572E-5 45.0 23 CGTTACC 20 7.0233323E-4 45.0 39 ATCCGGT 25 3.8825572E-5 45.0 12 ACTAGAC 25 3.8825572E-5 45.0 22 >>END_MODULE