##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933970.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1726833 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.4640801976798 33.0 31.0 34.0 31.0 34.0 2 32.695912691036135 34.0 31.0 34.0 31.0 34.0 3 32.76627792033161 34.0 31.0 34.0 31.0 34.0 4 36.11212896672695 37.0 35.0 37.0 35.0 37.0 5 36.12056290330333 37.0 35.0 37.0 35.0 37.0 6 35.65651166036322 37.0 35.0 37.0 35.0 37.0 7 36.05443085695027 37.0 35.0 37.0 35.0 37.0 8 36.089872616518214 37.0 36.0 37.0 35.0 37.0 9 37.95837524531903 39.0 38.0 39.0 35.0 39.0 10 37.648397384113 39.0 37.0 39.0 35.0 39.0 11 37.59278749016263 39.0 37.0 39.0 35.0 39.0 12 37.393936761690334 39.0 37.0 39.0 35.0 39.0 13 37.32261370960597 39.0 37.0 39.0 35.0 39.0 14 38.41930748369993 40.0 38.0 41.0 34.0 41.0 15 38.53110520820485 40.0 38.0 41.0 34.0 41.0 16 38.644773987988415 40.0 38.0 41.0 35.0 41.0 17 38.642780164613484 40.0 38.0 41.0 35.0 41.0 18 38.56569743571034 40.0 38.0 41.0 35.0 41.0 19 38.586891726067314 40.0 38.0 41.0 35.0 41.0 20 38.53937873552336 40.0 38.0 41.0 34.0 41.0 21 38.44437997189074 40.0 38.0 41.0 34.0 41.0 22 38.47508763151966 40.0 38.0 41.0 34.0 41.0 23 38.43569644545825 40.0 37.0 41.0 34.0 41.0 24 38.40136481060994 40.0 37.0 41.0 34.0 41.0 25 38.327358233251275 40.0 37.0 41.0 34.0 41.0 26 38.2600384634762 40.0 37.0 41.0 34.0 41.0 27 38.23488953477261 40.0 37.0 41.0 34.0 41.0 28 38.15547710751416 40.0 37.0 41.0 34.0 41.0 29 38.115346417401106 40.0 37.0 41.0 34.0 41.0 30 38.02512808129101 40.0 37.0 41.0 34.0 41.0 31 37.94961412018417 40.0 37.0 41.0 34.0 41.0 32 37.86860281220014 40.0 36.0 41.0 33.0 41.0 33 37.77948533529299 40.0 36.0 41.0 33.0 41.0 34 37.649165842904324 40.0 36.0 41.0 33.0 41.0 35 37.553947023250075 40.0 36.0 41.0 33.0 41.0 36 37.407383921896326 40.0 35.0 41.0 32.0 41.0 37 37.30377459777523 40.0 35.0 41.0 32.0 41.0 38 37.270258907491346 40.0 35.0 41.0 32.0 41.0 39 37.237500094102906 40.0 35.0 41.0 32.0 41.0 40 37.131825138852456 39.0 35.0 41.0 32.0 41.0 41 37.04701207354736 39.0 35.0 41.0 32.0 41.0 42 37.05634766071763 39.0 35.0 41.0 32.0 41.0 43 36.91402932420217 39.0 35.0 41.0 32.0 41.0 44 36.781015303738116 39.0 35.0 41.0 31.0 41.0 45 36.7989579768281 39.0 35.0 41.0 31.0 41.0 46 36.77886802024284 39.0 35.0 41.0 31.0 41.0 47 36.7148878901434 39.0 35.0 41.0 31.0 41.0 48 36.653136116810366 39.0 35.0 41.0 31.0 41.0 49 36.617293044550344 39.0 35.0 41.0 31.0 41.0 50 36.52796998899141 39.0 35.0 41.0 31.0 41.0 51 35.631992207700456 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 11.0 9 41.0 10 53.0 11 46.0 12 31.0 13 22.0 14 32.0 15 44.0 16 110.0 17 143.0 18 290.0 19 474.0 20 843.0 21 1386.0 22 2107.0 23 3064.0 24 4483.0 25 6621.0 26 9296.0 27 11084.0 28 13280.0 29 15988.0 30 20461.0 31 26427.0 32 36047.0 33 53769.0 34 105651.0 35 117094.0 36 122295.0 37 198367.0 38 366007.0 39 610828.0 40 436.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.867411614209363 4.725645155032362 53.43944666334266 15.96749656741561 2 19.688412255267302 4.299952572136391 51.89702768015205 24.11460749244426 3 21.407397241076584 4.413976337028537 52.575610959484784 21.603015462410088 4 19.364524537115056 4.875341159220376 49.10191083909098 26.658223464573588 5 18.584252211997338 8.201256288245592 48.461895273022925 24.75259622673414 6 21.851041762579243 8.743115286770637 50.96804381199572 18.437799138654405 7 82.79851033655252 2.3222280324733195 8.024342828750667 6.854918802223492 8 84.1264905176123 2.8498992085511454 8.668817424730706 4.3547928491058485 9 78.45888977104329 5.370235569971156 11.046928104802259 5.123946554183294 10 39.36391069663367 31.37888840437958 15.53097491187625 13.726225987110507 11 30.163484251227533 26.181223082950115 24.87675415051716 18.778538515305186 12 27.5884813412762 21.967034449770185 28.319414789965215 22.125069418988403 13 26.93346722004965 21.484532667605958 29.319743136713278 22.26225697563111 14 21.627047896351296 22.55823232472393 31.642492354500984 24.172227424423788 15 19.365393179305702 23.436719126864034 34.886407660729205 22.31148003310106 16 25.685112573132436 23.521324876232967 29.514550625335513 21.279011925299088 17 24.896211735587634 23.674090082827927 27.396337688705273 24.03336049287916 18 24.126421026237047 24.851679345947176 30.104358672784226 20.91754095503155 19 24.336632436373407 25.29364449254792 29.53325538717409 20.83646768390458 20 25.18541167559341 27.32180818874784 29.288529927329392 18.204250208329352 21 25.621759602694645 27.287178320080752 28.883858485447057 18.20720359177755 22 25.844247822458797 23.34765434758312 29.386396947475525 21.421700882482554 23 23.212956898553593 25.464940732543333 29.56811689375869 21.753985475144383 24 22.984388183454914 26.681329346844773 28.072836226780467 22.261446242919842 25 23.01282173782873 26.736343352252362 25.85768282167413 24.393152088244783 26 22.327463049408948 25.73595709602492 27.852201110356354 24.084378744209776 27 20.969775305429074 24.823361610532114 30.933043322660613 23.2738197613782 28 20.236930843920632 25.319008844514784 28.953234041739996 25.490826269824584 29 20.88488000866326 26.942269460914865 28.265211517268895 23.907639013152977 30 22.59778449913802 26.518314162400188 28.57630124047896 22.30760009798284 31 23.171204163923207 26.4674696395077 27.637878127184273 22.723448069384823 32 25.02633433574642 27.3746795434185 25.202668700447582 22.396317420387497 33 24.57724632318238 25.500555062359826 26.269361310561013 23.65283730389679 34 22.019789985482095 25.593268138841452 29.271157083516474 23.11578479215998 35 23.994850689093848 27.14576337144356 26.607263122722348 22.25212281674024 36 24.088258679327996 27.031739606551415 26.695459259812615 22.184542454307973 37 21.99436772403585 28.76358049678226 26.76877266070315 22.473279118478743 38 22.563907453702818 28.328217030830427 25.62888246865794 23.47899304680881 39 22.55603176450763 27.143620720706636 26.433766322510632 23.866581192275106 40 23.962305561684307 25.673009491942768 28.83179786348767 21.532887082885257 41 22.49736946189933 25.619269495081458 27.079283289119445 24.80407775389977 42 23.437877316451562 23.429827898818242 28.00734060560575 25.124954179124444 43 23.027530745590337 23.844807228029577 28.88194747262764 24.24571455375245 44 22.82936450716427 24.257528087545236 27.965877418372248 24.94722998691825 45 22.481791811947076 24.083625920977884 26.945222844363066 26.489359422711985 46 22.341998328732426 24.226836063475737 28.533737773137297 24.897427834654536 47 20.777689562337528 24.599599382221673 30.861640934589506 23.761070120851294 48 20.5214980255763 25.643649385898925 29.54842767077071 24.28642491775406 49 23.09679048292452 24.65849332274748 28.69136737599988 23.553348818328118 50 21.262102357321176 25.27314453684867 28.379061553722913 25.085691552107235 51 21.041467240897063 24.83129520920668 26.34197979769902 27.78525775219723 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 296.0 1 977.0 2 1658.0 3 3349.0 4 5040.0 5 3550.0 6 2060.0 7 2052.5 8 2045.0 9 2184.5 10 2324.0 11 2306.0 12 2288.0 13 2349.5 14 2411.0 15 2405.0 16 2399.0 17 2418.5 18 2438.0 19 2772.5 20 3107.0 21 3948.0 22 4789.0 23 5862.0 24 6935.0 25 8093.5 26 12100.0 27 14948.0 28 18021.5 29 21095.0 30 28557.0 31 36019.0 32 36285.0 33 36551.0 34 42086.0 35 47621.0 36 51429.5 37 55238.0 38 64291.0 39 73344.0 40 77734.0 41 82124.0 42 86625.5 43 91127.0 44 98569.5 45 106012.0 46 123167.0 47 140322.0 48 158346.0 49 176370.0 50 174350.0 51 172330.0 52 149763.0 53 127196.0 54 114990.0 55 102784.0 56 95574.0 57 88364.0 58 83514.0 59 78664.0 60 73506.0 61 68348.0 62 60688.5 63 53029.0 64 47228.0 65 41427.0 66 34501.5 67 27576.0 68 22263.5 69 16951.0 70 12995.0 71 9039.0 72 7479.0 73 5919.0 74 4900.5 75 2930.5 76 1979.0 77 1474.5 78 970.0 79 646.5 80 323.0 81 235.5 82 148.0 83 104.5 84 61.0 85 39.0 86 17.0 87 11.0 88 5.0 89 5.5 90 6.0 91 3.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1726833.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.52602624671856 #Duplication Level Percentage of deduplicated Percentage of total 1 70.21679528514191 18.625725546941386 2 11.689557555512765 6.2015502106011775 3 4.534502402005977 3.6084698919425673 4 2.2074947616797163 2.3422425595123952 5 1.298921109348065 1.7227607719491782 6 0.8564734171497985 1.3631301805759375 7 0.6592673500643568 1.2241420121988205 8 0.5014928693794182 1.064209041256052 9 0.4224036833190688 1.0084222071388993 >10 7.0571981992220065 47.66597843081895 >50 0.4757809747563656 7.562122399091997 >100 0.07236672276010199 3.2850423141986456 >500 0.0030982678641631916 0.5502267987104342 >1k 0.003762182406483875 2.227206309940667 >5k 8.852193897609117E-4 1.5487713251229474 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 8644 0.500569539729667 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACCTGTCTCTT 6694 0.3876460549456722 No Hit CCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGC 5813 0.3366278036150572 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGCT 5232 0.3029823960973644 Illumina Single End Adapter 1 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGC 4593 0.2659782387758399 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGC 4040 0.23395429668068654 Illumina Single End Adapter 1 (95% over 21bp) GCTCAACTTGACCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATG 3735 0.21629190547088226 No Hit GCTCAACTTGACCCCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTA 3537 0.20482582855435352 No Hit GCTCAACTTGACCCTGCATTAGAACTGTCTCTTATACACATCTGACGCGTC 3248 0.18808998901457177 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2588 0.14986973262614278 No Hit GCTCAACCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTC 1886 0.10921727810390466 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACCTGTCTCTTATACACATC 1837 0.10637971361446069 No Hit GCTCCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTC 1804 0.10446870079503924 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7372843812922268E-4 0.0 0.0 0.3187337744877472 0.0 2 1.7372843812922268E-4 0.0 0.0 1.2217741958834467 0.0 3 1.7372843812922268E-4 0.0 0.0 1.7754467282012794 0.0 4 1.7372843812922268E-4 0.0 0.0 2.299411697599015 0.0 5 1.7372843812922268E-4 0.0 0.0 3.2665000031850213 0.0 6 1.7372843812922268E-4 0.0 0.0 3.8616936322157382 0.0 7 1.7372843812922268E-4 0.0 0.0 4.3762193564751195 0.0 8 1.7372843812922268E-4 0.0 0.0 5.292115682292382 0.0 9 1.7372843812922268E-4 0.0 0.0 5.71045376130755 0.0 10 1.7372843812922268E-4 0.0 0.0 6.509372938784469 0.0 11 1.7372843812922268E-4 0.0 0.0 8.019999617797437 0.0 12 1.7372843812922268E-4 0.0 0.0 9.401256519883509 0.0 13 1.7372843812922268E-4 0.0 0.0 10.09454880697786 0.0 14 1.7372843812922268E-4 0.0 0.0 10.271867632828421 0.0 15 1.7372843812922268E-4 0.0 0.0 10.759754996574655 0.0 16 2.3163791750563026E-4 0.0 0.0 11.334390760426746 0.0 17 2.3163791750563026E-4 0.0 0.0 12.09647950902027 0.0 18 2.3163791750563026E-4 0.0 0.0 12.860131813556956 0.0 19 2.3163791750563026E-4 0.0 0.0 13.454688438314532 0.0 20 2.3163791750563026E-4 0.0 0.0 14.182784322514106 0.0 21 2.3163791750563026E-4 0.0 0.0 15.139391012332982 0.0 22 2.8954739688203784E-4 0.0 0.0 16.140356363354186 0.0 23 2.8954739688203784E-4 0.0 0.0 17.09012973460665 0.0 24 2.8954739688203784E-4 0.0 0.0 17.789965792870532 0.0 25 2.8954739688203784E-4 0.0 0.0 18.64951619525455 0.0 26 2.8954739688203784E-4 0.0 0.0 19.243899091573997 0.0 27 2.8954739688203784E-4 0.0 0.0 19.866657632787884 0.0 28 2.8954739688203784E-4 0.0 0.0 20.453686025226528 0.0 29 3.4745687625844536E-4 0.0 0.0 21.10279337955668 0.0 30 3.4745687625844536E-4 0.0 0.0 21.820870923824135 0.0 31 3.4745687625844536E-4 0.0 0.0 22.430136556343317 0.0 32 3.4745687625844536E-4 0.0 0.0 23.125397765736466 0.0 33 3.4745687625844536E-4 0.0 0.0 23.710283507438184 0.0 34 3.4745687625844536E-4 0.0 0.0 24.45088783918306 0.0 35 3.4745687625844536E-4 0.0 0.0 25.1027169390439 0.0 36 4.0536635563485294E-4 0.0 0.0 25.688645051374394 0.0 37 4.0536635563485294E-4 0.0 0.0 26.30966630820699 0.0 38 4.632758350112605E-4 0.0 0.0 26.983848467107126 0.0 39 5.211853143876681E-4 0.0 0.0 28.083607389944483 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGA 40 6.8193913E-9 45.0 22 CTACGTT 20 7.0342724E-4 45.0 30 GCTCAAC 4060 0.0 42.50616 1 CTTGACC 3950 0.0 42.26582 7 TTGACCC 3465 0.0 42.077923 8 CGAATAT 150 0.0 42.0 14 CATTAGA 2870 0.0 41.707317 17 TCAACTT 3840 0.0 41.660152 3 CTCAACT 3955 0.0 41.47282 2 ACTTGAC 3825 0.0 41.470592 6 TGCATTA 2925 0.0 41.076923 15 AACTTGA 3825 0.0 41.058826 5 CCTGCAT 3080 0.0 40.98214 13 GCATTAG 2990 0.0 40.48495 16 ATTAGAA 2950 0.0 40.347458 18 CCCTGCA 3155 0.0 40.150555 12 CGTAGTC 45 1.9292202E-8 40.0 5 ACCCTGC 3200 0.0 39.726562 11 CAACTTG 3990 0.0 39.473682 4 TGACCCT 3240 0.0 39.444443 9 >>END_MODULE