##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933969.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 913593 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.424569802964776 33.0 31.0 34.0 31.0 34.0 2 32.647726066202345 34.0 31.0 34.0 31.0 34.0 3 32.70774951209127 34.0 31.0 34.0 31.0 34.0 4 36.08949389936219 37.0 35.0 37.0 35.0 37.0 5 36.1241241997257 37.0 35.0 37.0 35.0 37.0 6 35.687990166299436 37.0 35.0 37.0 35.0 37.0 7 36.04384556361531 37.0 35.0 37.0 35.0 37.0 8 36.01513912650382 37.0 36.0 37.0 35.0 37.0 9 37.895832170342814 39.0 38.0 39.0 35.0 39.0 10 37.62885551881418 39.0 37.0 39.0 35.0 39.0 11 37.579829311301644 39.0 37.0 39.0 35.0 39.0 12 37.53476438632958 39.0 37.0 39.0 35.0 39.0 13 37.516874582007524 39.0 37.0 39.0 35.0 39.0 14 38.79703872512158 40.0 38.0 41.0 35.0 41.0 15 38.826193939752166 40.0 38.0 41.0 35.0 41.0 16 38.89289869777899 40.0 38.0 41.0 35.0 41.0 17 38.83704888281762 40.0 38.0 41.0 35.0 41.0 18 38.80225220639825 40.0 38.0 41.0 35.0 41.0 19 38.838335013512584 40.0 38.0 41.0 35.0 41.0 20 38.7665360833544 40.0 38.0 41.0 35.0 41.0 21 38.7197220206372 40.0 38.0 41.0 35.0 41.0 22 38.69866559835725 40.0 38.0 41.0 35.0 41.0 23 38.634857097197546 40.0 38.0 41.0 35.0 41.0 24 38.60528922616526 40.0 38.0 41.0 35.0 41.0 25 38.514168781941194 40.0 38.0 41.0 34.0 41.0 26 38.41157933565603 40.0 38.0 41.0 34.0 41.0 27 38.37961543050352 40.0 38.0 41.0 34.0 41.0 28 38.34517668152011 40.0 38.0 41.0 34.0 41.0 29 38.32837269987839 40.0 38.0 41.0 34.0 41.0 30 38.30349400663096 40.0 38.0 41.0 34.0 41.0 31 38.280530827184535 40.0 38.0 41.0 34.0 41.0 32 38.158090090445086 40.0 38.0 41.0 34.0 41.0 33 38.077712942196364 40.0 38.0 41.0 34.0 41.0 34 38.00038091360157 40.0 37.0 41.0 34.0 41.0 35 37.94261886857714 40.0 37.0 41.0 34.0 41.0 36 37.83067295830857 40.0 37.0 41.0 33.0 41.0 37 37.71226465176506 40.0 37.0 41.0 33.0 41.0 38 37.72465528960927 40.0 37.0 41.0 33.0 41.0 39 37.72964000380914 40.0 37.0 41.0 33.0 41.0 40 37.604425603085836 40.0 37.0 41.0 33.0 41.0 41 37.505322391918504 40.0 37.0 41.0 33.0 41.0 42 37.47396050538916 40.0 36.0 41.0 33.0 41.0 43 37.335209442279 40.0 36.0 41.0 32.0 41.0 44 37.217023335336414 39.0 36.0 41.0 32.0 41.0 45 37.26531289097005 40.0 36.0 41.0 32.0 41.0 46 37.201822912390966 39.0 36.0 41.0 32.0 41.0 47 37.111319810900476 39.0 36.0 41.0 32.0 41.0 48 37.08237585007766 39.0 35.0 41.0 32.0 41.0 49 37.06852832716538 39.0 35.0 41.0 32.0 41.0 50 36.99128167575715 39.0 35.0 41.0 32.0 41.0 51 36.048821521180656 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 18.0 10 25.0 11 16.0 12 11.0 13 20.0 14 16.0 15 19.0 16 30.0 17 64.0 18 101.0 19 232.0 20 491.0 21 779.0 22 1190.0 23 1747.0 24 2345.0 25 3298.0 26 4345.0 27 5424.0 28 6383.0 29 7677.0 30 9572.0 31 12490.0 32 16371.0 33 22969.0 34 39714.0 35 54089.0 36 61475.0 37 100596.0 38 203545.0 39 358310.0 40 228.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.788726489804542 4.285059101810106 51.57975159617029 18.346462812215066 2 18.61222666986284 7.616849078309489 51.54176969394467 22.229154557882996 3 19.30783182445575 7.536397498667349 51.39367311264426 21.76209756423265 4 18.394186470342923 4.397362939514641 54.09181112377175 23.116639466370692 5 20.095819473222758 5.37110069801323 50.14289732955485 24.390182499209168 6 20.67835458459073 8.11871369417235 52.123210225997795 19.079721495239127 7 79.18613649622972 1.9441917790525978 13.00119418603251 5.868477538685169 8 79.4176400213224 4.8360703289101385 9.259155882323968 6.48713376744349 9 74.19551156806149 5.3423132620324365 11.656831871522657 8.805343298383415 10 33.30618776632483 36.3189078725428 17.521916214331764 12.8529881468006 11 24.49372970239483 25.316415515442873 30.79861601391429 19.391238768248005 12 23.6189419139595 22.134801820942148 33.1914758541276 21.05478041097075 13 22.931217730433573 22.69840071016306 33.5230239285984 20.847357630804964 14 17.692670587449772 28.36569457077714 29.826082292662047 24.115552549111037 15 15.829915509422687 27.63374938293091 35.20429775622186 21.33203735142454 16 17.965549210644127 26.82802954926318 31.29851038701041 23.90791085308228 17 17.752544075972562 27.547934364645965 30.54029529560756 24.15922626377391 18 17.785709829212788 27.20226621701348 31.75878098890863 23.2532429648651 19 19.97848057066987 26.59707331382793 30.179740869293 23.2447052462092 20 23.288269502940587 26.69033147145392 31.379837630104433 18.64156139550106 21 23.925424122120027 27.301872934665656 29.218152941189345 19.554550002024975 22 21.002021687994546 25.690871099056146 29.475488538112703 23.83161867483661 23 21.12286324435498 27.195589283192845 28.955125531828724 22.72642194062345 24 22.329855854850024 24.16973422519656 28.4840185947134 25.01639132524001 25 19.9448769857037 28.916596339945688 26.40650705511097 24.73201961923964 26 19.424623437351205 30.76019627996274 27.049462944659165 22.76571733802689 27 19.86639564882831 31.241263888843278 28.148311118846138 20.744029343482275 28 16.951859307153185 29.063051052273824 31.346781334795693 22.6383083057773 29 18.59350936357875 27.207848571519268 29.83254031061972 24.36610175428227 30 18.93567485740368 27.904767221290005 30.507895747887737 22.65166217341858 31 19.63795694581723 27.776810899382987 27.667790799623027 24.91744135517676 32 22.61291406567257 28.8007898484336 25.836012316206453 22.75028376968738 33 22.55358786680721 26.395999093688328 27.854854404532436 23.195558634972027 34 21.12450511332727 25.601115595237705 28.63342867119166 24.64095062024337 35 21.627026476779047 25.697657490808268 26.869404647364853 25.805911385047825 36 21.753231471782293 27.831868238920393 28.24682325718345 22.16807703211386 37 19.936996014636716 28.383207839814883 30.152814218147466 21.526981927400932 38 20.22300958960938 25.91055316754835 29.70852447424619 24.15791276859608 39 22.171798601784385 24.08687457106173 29.763362897920626 23.97796392923326 40 22.396077903398997 23.80644335059485 31.00111318716321 22.796365558842943 41 20.532666077782995 26.462549516031757 27.478756951946874 25.526027454238374 42 23.523166223909335 25.522196426636366 27.33886971550789 23.615767633946408 43 23.9364793732001 25.452471724279853 27.725037297790156 22.886011604729898 44 20.56189134548973 25.183861960413445 29.15269709816078 25.101549595936046 45 20.166200923168194 23.49952331070838 28.244086808896302 28.090188957227124 46 21.124942945053213 25.29747929329581 29.518067673460717 24.059510088190255 47 18.706251033009227 24.905838814439253 32.735693027420304 23.652217125131212 48 19.44826635055216 23.660864301718597 30.680620363772487 26.210248983956753 49 20.22530820617058 22.69916691568346 32.98481927948222 24.090705598663735 50 20.850860284612512 22.495903536914142 29.975820742934765 26.67741543553858 51 19.16652163490745 22.14815568858343 28.279222804903277 30.406099871605846 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 221.0 1 574.5 2 928.0 3 2024.0 4 3120.0 5 2257.0 6 1394.0 7 1511.0 8 1628.0 9 1780.5 10 1933.0 11 2013.0 12 2093.0 13 2053.5 14 2014.0 15 2009.5 16 2005.0 17 2172.0 18 2339.0 19 2688.5 20 3038.0 21 3403.0 22 3768.0 23 4498.0 24 5228.0 25 6182.0 26 9156.0 27 11176.0 28 12674.5 29 14173.0 30 16430.0 31 18687.0 32 21018.0 33 23349.0 34 26480.0 35 29611.0 36 32452.5 37 35294.0 38 38164.5 39 41035.0 40 44659.0 41 48283.0 42 51109.5 43 53936.0 44 59093.5 45 64251.0 46 82259.0 47 100267.0 48 104374.0 49 108481.0 50 101127.0 51 93773.0 52 74847.5 53 55922.0 54 47372.0 55 38822.0 56 35964.5 57 33107.0 58 32110.0 59 31113.0 60 29731.5 61 28350.0 62 23959.5 63 19569.0 64 15355.5 65 11142.0 66 8817.0 67 6492.0 68 5083.5 69 3675.0 70 3197.0 71 2719.0 72 2213.0 73 1707.0 74 1262.0 75 678.0 76 539.0 77 406.5 78 274.0 79 195.0 80 116.0 81 80.0 82 44.0 83 27.5 84 11.0 85 9.5 86 8.0 87 5.0 88 2.0 89 1.0 90 0.0 91 1.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 913593.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.222062456172857 #Duplication Level Percentage of deduplicated Percentage of total 1 72.52428072535602 22.643576223960793 2 10.496322893473405 6.554336978803672 3 3.528095473356486 3.304632516614308 4 1.7195786656347485 2.1475516998700197 5 1.075563918930869 1.6790661926232815 6 0.892026256915814 1.6710539703582983 7 0.7075390242380767 1.5463579323458583 8 0.645067810568034 1.6112277976017468 9 0.5859441029021808 1.6464945038974257 >10 7.64356130209096 43.53253882845863 >50 0.11686098548204643 2.513250153563523 >100 0.05347274455849664 3.1036661558889436 >500 0.004249489633787221 0.8465951250628693 >1k 0.005665986178382961 3.334636146257821 >5k 0.0017706206807446753 3.865015774692794 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTGC 9341 1.022446538009814 No Hit CTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTGCT 8518 0.9323626603969163 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGC 6175 0.6759027269254471 No Hit GCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTGC 5535 0.6058496507744696 No Hit TCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTGC 5388 0.5897593348460419 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCG 4831 0.5287912670083944 No Hit GAATCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTC 4673 0.5114969138336218 No Hit CGCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTG 3099 0.3392101296748114 No Hit TCCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTG 2037 0.22296580643678313 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCC 1869 0.20457687394715152 No Hit CGTTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTC 1772 0.193959454593019 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1565 0.1713016627754372 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAATCTCGGT 1308 0.1431709743835603 No Hit GAATGACTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCT 1274 0.13944940471303963 No Hit TTCCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCT 1202 0.13156843364605464 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTC 1151 0.12598607914027363 No Hit GCCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTG 1148 0.1256577053458159 No Hit TGCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTG 1114 0.12193613567529525 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAATCTCGGTCGTA 1050 0.11493082806019747 No Hit CGTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCT 1042 0.11405516460831026 No Hit GAACTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCT 1025 0.11219437977304993 No Hit TTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTG 981 0.10737823078767021 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0945793148590236E-4 0.0 0.0 0.9841362619897481 0.0 2 1.0945793148590236E-4 0.0 0.0 3.3848770732700446 0.0 3 1.0945793148590236E-4 0.0 0.0 4.657653900588118 0.0 4 1.0945793148590236E-4 0.0 0.0 5.88850834014709 0.0 5 1.0945793148590236E-4 0.0 0.0 8.100653135477176 0.0 6 1.0945793148590236E-4 0.0 0.0 8.969201821817812 0.0 7 1.0945793148590236E-4 0.0 0.0 9.931227581647407 0.0 8 1.0945793148590236E-4 0.0 0.0 11.198203138596728 0.0 9 1.0945793148590236E-4 0.0 0.0 11.729074106303354 0.0 10 1.0945793148590236E-4 0.0 0.0 13.260828399517072 0.0 11 1.0945793148590236E-4 0.0 0.0 15.066665353171489 0.0 12 1.0945793148590236E-4 0.0 0.0 17.34579840257095 0.0 13 1.0945793148590236E-4 0.0 0.0 17.94519003538775 0.0 14 1.0945793148590236E-4 0.0 0.0 18.189719054327256 0.0 15 1.0945793148590236E-4 0.0 0.0 18.627550780270866 0.0 16 1.0945793148590236E-4 0.0 0.0 19.36704856538962 0.0 17 1.0945793148590236E-4 0.0 0.0 20.397813906192365 0.0 18 1.0945793148590236E-4 0.0 0.0 21.390159513043553 0.0 19 1.0945793148590236E-4 0.0 0.0 22.281256533270284 0.0 20 1.0945793148590236E-4 0.0 0.0 23.046367474356742 0.0 21 1.0945793148590236E-4 0.0 0.0 23.95782366983985 0.0 22 1.0945793148590236E-4 0.0 0.0 24.98399177752019 0.0 23 1.0945793148590236E-4 0.0 0.0 25.895010141277353 0.0 24 1.0945793148590236E-4 0.0 0.0 26.58776938965163 0.0 25 1.0945793148590236E-4 0.0 0.0 27.1850813217702 0.0 26 1.0945793148590236E-4 0.0 0.0 27.721534643982604 0.0 27 1.0945793148590236E-4 0.0 0.0 28.267291890371315 0.0 28 1.0945793148590236E-4 0.0 0.0 28.814253174006367 0.0 29 1.0945793148590236E-4 0.0 0.0 29.386499239814665 0.0 30 1.0945793148590236E-4 0.0 0.0 30.010737823078767 0.0 31 1.0945793148590236E-4 0.0 0.0 30.60553222277316 0.0 32 1.0945793148590236E-4 0.0 0.0 31.17208647614419 0.0 33 2.1891586297180472E-4 0.0 0.0 31.680299652033234 0.0 34 2.1891586297180472E-4 0.0 0.0 32.20066265831721 0.0 35 2.1891586297180472E-4 0.0 0.0 32.72058783287525 0.0 36 2.1891586297180472E-4 0.0 0.0 33.24959801574662 0.0 37 2.1891586297180472E-4 0.0 0.0 33.782001394494046 0.0 38 2.1891586297180472E-4 0.0 0.0 34.283975468288396 0.0 39 2.1891586297180472E-4 0.0 0.0 34.791094064862584 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACTAA 20 7.032525E-4 45.0 18 TACGTCG 20 7.032525E-4 45.0 12 TTTCGCG 330 0.0 42.272728 1 CGTTTTT 1290 0.0 41.16279 1 CGGGTAT 110 0.0 40.909092 6 TTTGTCG 215 0.0 40.813953 1 CTTTGCG 280 0.0 40.17857 1 TGGGCGA 1035 0.0 39.999996 6 CTCGTTG 120 0.0 39.374996 1 TTCGTTG 385 0.0 39.155846 1 ACGCCGG 75 0.0 39.0 27 CGGGCAC 175 0.0 38.57143 6 CGGCGAA 35 6.2468825E-6 38.571426 31 GCGATAT 35 6.2468825E-6 38.571426 9 TAGTGCG 35 6.2468825E-6 38.571426 1 GCGATCT 310 0.0 38.46774 9 TGCGGGC 300 0.0 38.25 4 ACGGGAT 165 0.0 38.18182 5 GGGCGAT 1595 0.0 37.94671 7 TCTACGG 95 0.0 37.894737 2 >>END_MODULE