##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933968.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1582751 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.37795269123191 33.0 31.0 34.0 31.0 34.0 2 32.6021193478949 34.0 31.0 34.0 31.0 34.0 3 32.65518012624854 34.0 31.0 34.0 31.0 34.0 4 36.04591120144609 37.0 35.0 37.0 35.0 37.0 5 36.094958714289234 37.0 35.0 37.0 35.0 37.0 6 35.77468281492161 37.0 35.0 37.0 35.0 37.0 7 36.09840461323354 37.0 35.0 37.0 35.0 37.0 8 36.104590677876686 37.0 36.0 37.0 35.0 37.0 9 37.92341751797977 39.0 38.0 39.0 35.0 39.0 10 37.525582356289775 39.0 37.0 39.0 35.0 39.0 11 37.60942055951947 39.0 37.0 39.0 35.0 39.0 12 37.46772233914242 39.0 37.0 39.0 35.0 39.0 13 37.43269724675581 39.0 37.0 39.0 35.0 39.0 14 38.64957280077536 40.0 38.0 41.0 35.0 41.0 15 38.678094659235725 40.0 38.0 41.0 35.0 41.0 16 38.71545239901918 40.0 38.0 41.0 35.0 41.0 17 38.681288465462984 40.0 38.0 41.0 35.0 41.0 18 38.63929512601793 40.0 38.0 41.0 35.0 41.0 19 38.67528815334819 40.0 38.0 41.0 35.0 41.0 20 38.64473438967974 40.0 38.0 41.0 35.0 41.0 21 38.57235092569836 40.0 38.0 41.0 34.0 41.0 22 38.572968837170215 40.0 38.0 41.0 34.0 41.0 23 38.50596966926573 40.0 38.0 41.0 34.0 41.0 24 38.49591502390458 40.0 38.0 41.0 34.0 41.0 25 38.38718598187586 40.0 38.0 41.0 34.0 41.0 26 38.33873047624042 40.0 38.0 41.0 34.0 41.0 27 38.305670317061875 40.0 38.0 41.0 34.0 41.0 28 38.23227721858966 40.0 37.0 41.0 34.0 41.0 29 38.254999680935285 40.0 38.0 41.0 34.0 41.0 30 38.16636287072319 40.0 37.0 41.0 34.0 41.0 31 38.11898776244652 40.0 37.0 41.0 34.0 41.0 32 38.052464348466685 40.0 37.0 41.0 34.0 41.0 33 37.92608312994274 40.0 37.0 41.0 33.0 41.0 34 37.92444737043287 40.0 37.0 41.0 33.0 41.0 35 37.87472508309899 40.0 37.0 41.0 33.0 41.0 36 37.71283670015056 40.0 37.0 41.0 33.0 41.0 37 37.649714326511244 40.0 37.0 41.0 33.0 41.0 38 37.66898393998803 40.0 37.0 41.0 33.0 41.0 39 37.675600899952045 40.0 37.0 41.0 33.0 41.0 40 37.61335990310542 40.0 37.0 41.0 33.0 41.0 41 37.464507051330244 40.0 36.0 41.0 33.0 41.0 42 37.36228629771834 40.0 36.0 41.0 32.0 41.0 43 37.20357150303491 39.0 36.0 41.0 32.0 41.0 44 37.13548751509239 39.0 36.0 41.0 32.0 41.0 45 37.182892950312464 39.0 36.0 41.0 32.0 41.0 46 37.07450824545364 39.0 35.0 41.0 31.0 41.0 47 36.96333409361296 39.0 35.0 41.0 31.0 41.0 48 36.882924730421905 39.0 35.0 41.0 31.0 41.0 49 36.871799164871796 39.0 35.0 41.0 31.0 41.0 50 36.80128207153241 39.0 35.0 41.0 31.0 41.0 51 35.79637858387074 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 10.0 10 23.0 11 26.0 12 11.0 13 18.0 14 17.0 15 29.0 16 43.0 17 80.0 18 134.0 19 293.0 20 564.0 21 913.0 22 1434.0 23 2238.0 24 3275.0 25 5089.0 26 7272.0 27 9236.0 28 11394.0 29 13935.0 30 17857.0 31 23029.0 32 30504.0 33 43356.0 34 75212.0 35 100912.0 36 114193.0 37 189330.0 38 375171.0 39 556877.0 40 274.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.535446194632005 4.604009095555775 58.33368609465418 14.526858615158039 2 18.97367305406852 4.160288004872529 55.494641924092925 21.37139701696603 3 20.184602631746877 4.206915680356544 53.716724867019515 21.891756820877067 4 19.142556220150865 4.51233327289005 52.41765761007259 23.927452896886496 5 17.796039933002728 5.304814212722026 52.11426181376603 24.784884040509215 6 21.75907644348353 5.863967231737652 53.30269890841958 19.074257416359238 7 83.84837539195995 1.627230057033608 9.6517392817948 4.872655269211645 8 85.07724841115248 2.250196019462316 7.233481450967334 5.439074118417868 9 78.4002663716529 6.181894688425406 9.584640919512925 5.833198020408769 10 27.440387022342744 45.053580759070755 14.583405728380521 12.922626490205976 11 28.901703426502333 24.51750148949519 27.520816603496062 19.05997848050641 12 27.095986671308374 21.22936583202285 30.353163574055554 21.321483922613222 13 25.124293082108306 21.35819216035877 33.17931879367001 20.33819596386292 14 20.444782533702398 24.67690748576371 31.572306698905894 23.306003281628 15 18.03909774816127 25.92441893892343 34.71904298275597 21.317440330159325 16 20.718799103586097 26.67223081836625 30.279115287243542 22.329854790804113 17 20.733899394156126 25.713962587924442 29.98582847207173 23.566309545847705 18 20.545935526181946 24.68006654236832 32.5459279444461 22.22806998700364 19 21.201945220694853 26.32321824468915 30.736104415666144 21.738732118949855 20 23.25716426652076 26.767318422164955 31.01972451762785 18.955792793686435 21 24.654162278210535 26.82601369387857 29.543307822898235 18.976516205012665 22 22.03776841714205 24.68834327067239 29.985386204147087 23.28850210803847 23 20.983338503655975 25.82156005587739 29.671375977649046 23.523725462817588 24 22.68240550787837 23.44196907789033 29.65791839651341 24.217707017717885 25 20.12976140909088 26.61081875797267 27.84114494320332 25.418274889733127 26 20.20482059401637 27.394896607236387 28.351774852772166 24.04850794597508 27 20.08502916756963 27.77707927526187 29.002540513321424 23.135351043847074 28 17.65230285749306 27.835521822447117 31.178561883707545 23.333613436352273 29 19.548621356107184 25.35932689349114 30.000044226792465 25.09200752360921 30 21.23694756787391 26.136644361621002 30.77963621567764 21.84677185482745 31 22.156485764343223 28.269007569731436 27.2964604034368 22.27804626248854 32 23.05226785514588 27.493901441224804 26.76055804103109 22.693272662598226 33 21.220457292397857 26.2784860031679 29.444366170041906 23.05669053439233 34 21.928844145415166 24.961538485838897 29.305620403967524 23.803996964778413 35 21.76849043216526 24.52129235742072 28.349942599941496 25.360274610472526 36 21.436410401888864 28.01255535456935 29.26259405301276 21.288440190529023 37 20.206589665714947 29.302082260570362 29.0374164982363 21.45391157547839 38 18.90973374839125 28.15951466781572 28.834099615163723 24.096651968629303 39 21.272708088638073 23.70442350060117 31.366399389417538 23.65646902134322 40 24.163560787514903 22.760307843748006 30.952499793081795 22.1236315756553 41 23.145902292906463 24.547196621578504 28.614987449068106 23.69191363644692 42 22.869927107927907 24.825004059387737 28.541507792444925 23.76356104023943 43 21.245856107498906 24.62149763291889 29.94810933621271 24.1845369233695 44 20.590920492231565 23.840894745920234 28.780016566092836 26.788168195755365 45 22.18011550774569 22.61341171163373 27.723754399776084 27.48271838084449 46 23.381567915610226 24.258332485653145 29.15360660015378 23.20649299858285 47 20.207726926092604 24.677981565009276 31.643827740434215 23.470463768463894 48 19.64674165424631 24.37490167436318 30.957238377988705 25.021118293401805 49 21.572313017019102 22.09273600206223 32.72871095958871 23.60624002132995 50 22.36422532666225 21.3039195678916 30.185354487218774 26.146500618227375 51 21.462188303782465 20.829302903615286 28.71380273966025 28.994706052942 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 201.0 1 717.0 2 1233.0 3 3020.0 4 4807.0 5 3288.5 6 1770.0 7 1835.0 8 1900.0 9 2120.0 10 2340.0 11 2527.0 12 2714.0 13 2706.0 14 2698.0 15 2821.0 16 2944.0 17 3001.5 18 3059.0 19 3133.5 20 3208.0 21 3897.5 22 4587.0 23 6247.0 24 7907.0 25 9705.5 26 13698.0 27 15892.0 28 18963.5 29 22035.0 30 24671.0 31 27307.0 32 30871.0 33 34435.0 34 40142.0 35 45849.0 36 50802.5 37 55756.0 38 61506.5 39 67257.0 40 73729.0 41 80201.0 42 89192.0 43 98183.0 44 108665.5 45 119148.0 46 140815.0 47 162482.0 48 183367.0 49 204252.0 50 191963.0 51 179674.0 52 146813.0 53 113952.0 54 94464.0 55 74976.0 56 66316.0 57 57656.0 58 54152.5 59 50649.0 60 46373.0 61 42097.0 62 35952.5 63 29808.0 64 24576.0 65 19344.0 66 15926.5 67 12509.0 68 9759.5 69 7010.0 70 5706.0 71 4402.0 72 3817.0 73 3232.0 74 2506.0 75 1357.0 76 934.0 77 780.0 78 626.0 79 456.5 80 287.0 81 185.5 82 84.0 83 57.5 84 31.0 85 25.0 86 19.0 87 11.5 88 4.0 89 4.5 90 5.0 91 3.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1582751.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.34146854543654 #Duplication Level Percentage of deduplicated Percentage of total 1 67.34343570364946 20.43298736143908 2 13.66922008375687 8.29488422423917 3 5.645818511925464 5.139072743784894 4 2.9392687018906107 3.567269154600002 5 1.7613696072660592 2.6721270267875523 6 1.1289768036351904 2.055288850561477 7 0.8079551780424962 1.7160182634489283 8 0.5750936328153248 1.3959348296597607 9 0.45213694078663275 1.234664889039677 >10 5.219335283369006 37.598601923839375 >50 0.3639142263883051 6.7691098228411155 >100 0.08545713154621568 4.708183684389085 >500 0.00400909746416909 0.7922729313067702 >1k 0.0031650769453966496 1.5768632160069291 >5k 8.4402051877244E-4 2.0467210780562533 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGC 9195 0.5809505095874209 No Hit TCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGC 7821 0.4941396340927916 No Hit CTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGCT 7564 0.4779020831451062 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGC 7389 0.466845385028978 No Hit TCCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTG 3062 0.19346062646619716 No Hit CGCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTG 2558 0.16161733589174798 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2502 0.15807919249458693 No Hit TGCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTG 1947 0.12301366418343758 No Hit GCCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTG 1940 0.12257139625879246 No Hit TTCCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCT 1868 0.11802235474815685 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCC 1714 0.10829246040596405 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.527245283686442E-4 0.0 0.0 0.5050699699447354 0.0 2 2.527245283686442E-4 0.0 0.0 2.181075860953492 0.0 3 2.527245283686442E-4 0.0 0.0 3.1684705932897845 0.0 4 2.527245283686442E-4 0.0 0.0 4.164773865251072 0.0 5 2.527245283686442E-4 0.0 0.0 5.8214463298396275 0.0 6 2.527245283686442E-4 0.0 0.0 6.774154620657324 0.0 7 2.527245283686442E-4 0.0 0.0 7.60024792276233 0.0 8 2.527245283686442E-4 0.0 0.0 8.987579221242003 0.0 9 2.527245283686442E-4 0.0 0.0 9.575542836491653 0.0 10 2.527245283686442E-4 0.0 0.0 11.045578236879964 0.0 11 2.527245283686442E-4 0.0 0.0 13.370454354475214 0.0 12 2.527245283686442E-4 0.0 0.0 15.815564166441847 0.0 13 2.527245283686442E-4 0.0 0.0 16.55794246852474 0.0 14 2.527245283686442E-4 0.0 0.0 16.798915306324243 0.0 15 2.527245283686442E-4 0.0 0.0 17.18362521963341 0.0 16 2.527245283686442E-4 0.0 0.0 18.03347462740507 0.0 17 3.1590566046080525E-4 0.0 0.0 19.321548367367956 0.0 18 3.7908679255296634E-4 0.0 0.0 20.620489262050697 0.0 19 3.7908679255296634E-4 0.0 0.0 21.56498400569641 0.0 20 3.7908679255296634E-4 0.0 0.0 22.831386617351686 0.0 21 3.7908679255296634E-4 0.0 0.0 24.457732138536006 0.0 22 3.7908679255296634E-4 0.0 0.0 26.201847289940112 0.0 23 4.422679246451274E-4 0.0 0.0 27.770887524316837 0.0 24 4.422679246451274E-4 0.0 0.0 28.920847309526263 0.0 25 4.422679246451274E-4 0.0 0.0 29.978752185277408 0.0 26 4.422679246451274E-4 0.0 0.0 30.900501721369945 0.0 27 4.422679246451274E-4 0.0 0.0 31.790723872548494 0.0 28 4.422679246451274E-4 0.0 0.0 32.76472420488125 0.0 29 4.422679246451274E-4 0.0 0.0 33.79179668817142 0.0 30 5.054490567372884E-4 0.0 0.0 34.86657092619117 0.0 31 5.686301888294495E-4 0.0 0.0 35.84625756041222 0.0 32 5.686301888294495E-4 0.0 0.0 36.736921979515415 0.0 33 5.686301888294495E-4 0.0 0.0 37.654754285418235 0.0 34 5.686301888294495E-4 0.0 0.0 38.55641222150547 0.0 35 5.686301888294495E-4 0.0 0.0 39.4556692745732 0.0 36 5.686301888294495E-4 0.0 0.0 40.362255338963614 0.0 37 5.686301888294495E-4 0.0 0.0 41.23977808259164 0.0 38 5.686301888294495E-4 0.0 0.0 42.09278654696791 0.0 39 5.686301888294495E-4 0.0 0.0 42.937897369832655 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCATA 20 7.034095E-4 45.0 6 ACGGCAT 20 7.034095E-4 45.0 41 TAGGCCG 20 7.034095E-4 45.0 42 ATCGCCC 40 6.8175723E-9 45.0 10 CGTTTTT 1680 0.0 40.044643 1 GGACGTA 45 1.9290383E-8 40.0 8 TTATCCG 40 3.4593177E-7 39.375 1 TTCTGCG 580 0.0 39.181038 1 TTTGGGA 16205 0.0 39.02962 4 TGGGCGA 2175 0.0 38.793102 6 TTTGTCG 455 0.0 38.076923 1 TTGGGAC 5685 0.0 38.07388 5 TACGGGA 280 0.0 37.767857 4 TGGGATG 4075 0.0 37.546013 6 GGGCGAT 3245 0.0 37.511555 7 CAACGTA 30 1.1401166E-4 37.499996 33 CGTTCCG 30 1.1401166E-4 37.499996 37 TGACACG 30 1.1401166E-4 37.499996 39 ACGGATA 30 1.1401166E-4 37.499996 16 TTGGGAT 8215 0.0 37.41327 5 >>END_MODULE