##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933967.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 557048 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.363085407361666 33.0 31.0 34.0 31.0 34.0 2 32.59738837586707 34.0 31.0 34.0 31.0 34.0 3 32.66786345162356 34.0 31.0 34.0 31.0 34.0 4 36.03622488546768 37.0 35.0 37.0 35.0 37.0 5 36.08793317631515 37.0 35.0 37.0 35.0 37.0 6 35.72853326822823 37.0 35.0 37.0 35.0 37.0 7 36.05185370021973 37.0 35.0 37.0 35.0 37.0 8 36.052214530884235 37.0 36.0 37.0 35.0 37.0 9 37.9268267725582 39.0 38.0 39.0 35.0 39.0 10 37.600345033103075 39.0 37.0 39.0 35.0 39.0 11 37.54715213051658 39.0 37.0 39.0 35.0 39.0 12 37.38817480719794 39.0 37.0 39.0 35.0 39.0 13 37.31829932070486 39.0 37.0 39.0 34.0 39.0 14 38.51419267280378 40.0 38.0 41.0 34.0 41.0 15 38.58612902299263 40.0 38.0 41.0 35.0 41.0 16 38.6630954603553 40.0 38.0 41.0 35.0 41.0 17 38.634392368341686 40.0 38.0 41.0 35.0 41.0 18 38.61332057560569 40.0 38.0 41.0 35.0 41.0 19 38.64300562967644 40.0 38.0 41.0 35.0 41.0 20 38.59688034065287 40.0 38.0 41.0 35.0 41.0 21 38.51017506570349 40.0 38.0 41.0 34.0 41.0 22 38.500658830118766 40.0 38.0 41.0 34.0 41.0 23 38.45280299004754 40.0 38.0 41.0 34.0 41.0 24 38.45036334391291 40.0 38.0 41.0 34.0 41.0 25 38.32435265901682 40.0 37.0 41.0 34.0 41.0 26 38.23045590326148 40.0 37.0 41.0 34.0 41.0 27 38.26069925751461 40.0 37.0 41.0 34.0 41.0 28 38.20264501443323 40.0 37.0 41.0 34.0 41.0 29 38.200625439818474 40.0 37.0 41.0 34.0 41.0 30 38.17547500394939 40.0 37.0 41.0 34.0 41.0 31 38.07270827648605 40.0 37.0 41.0 34.0 41.0 32 37.85087820080137 40.0 36.0 41.0 34.0 41.0 33 37.856732274418 40.0 37.0 41.0 34.0 41.0 34 37.86984963593802 40.0 37.0 41.0 34.0 41.0 35 37.75202675532449 40.0 36.0 41.0 33.0 41.0 36 37.69220067211443 40.0 36.0 41.0 33.0 41.0 37 37.66321394206604 40.0 36.0 41.0 33.0 41.0 38 37.58011338340682 40.0 36.0 41.0 33.0 41.0 39 37.623280220016944 40.0 36.0 41.0 33.0 41.0 40 37.51609735606267 40.0 36.0 41.0 33.0 41.0 41 37.32952277003059 39.0 35.0 41.0 33.0 41.0 42 37.27206811621261 39.0 35.0 41.0 33.0 41.0 43 37.26114984705088 39.0 35.0 41.0 33.0 41.0 44 37.214098246470684 39.0 35.0 41.0 32.0 41.0 45 37.250220806824544 39.0 35.0 41.0 33.0 41.0 46 37.15968282805073 39.0 35.0 41.0 32.0 41.0 47 37.05876692852321 39.0 35.0 41.0 32.0 41.0 48 37.00460283494421 39.0 35.0 41.0 32.0 41.0 49 37.013006060519025 39.0 35.0 41.0 32.0 41.0 50 36.91897466645603 39.0 35.0 41.0 32.0 41.0 51 35.932059714782206 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 8.0 10 10.0 11 8.0 12 14.0 13 9.0 14 15.0 15 6.0 16 18.0 17 25.0 18 58.0 19 102.0 20 187.0 21 329.0 22 523.0 23 751.0 24 1152.0 25 1758.0 26 2471.0 27 3012.0 28 3657.0 29 4550.0 30 5976.0 31 7810.0 32 10751.0 33 15541.0 34 29664.0 35 42791.0 36 39215.0 37 63189.0 38 126727.0 39 196594.0 40 124.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.23767431172897 4.730472059858396 55.26022892102655 16.771624707386078 2 18.39697835734084 4.9713848716807165 54.812870704140394 21.818766066838048 3 21.232102080969682 4.629762605735951 52.350246298344125 21.787889014950238 4 19.746772270971263 4.269650012207206 52.25958983785958 23.723987878961957 5 18.912194281282762 5.102791859947438 51.44080940960204 24.544204449167754 6 20.377777139492466 6.657415518949892 53.46307679050998 19.501730551047665 7 81.16463931294969 1.9319699559104422 11.170671109132426 5.73271962200744 8 81.83262483663886 3.106554551851905 8.60392641208657 6.4568941994226705 9 76.7090089184415 4.9437391391765155 11.577637833723484 6.769614108658501 10 36.08145079059614 26.537569473366744 19.581256911433126 17.799722824603982 11 26.27529405006391 28.268838592006436 25.838527380046244 19.617339977883415 12 25.05511194726487 22.80772931596559 31.35833895822263 20.77881977854691 13 22.8789978601485 24.420696241616522 32.405465956255114 20.294839941979863 14 17.979061050394222 27.73243957432753 31.458330341370942 22.83016903390731 15 16.16772701813847 26.119472648676595 36.7201749220893 20.992625411095634 16 17.90276600939237 26.021994513937756 32.51640792175899 23.558831554910885 17 18.088387356206287 26.40346971894702 30.17495799284801 25.33318493199868 18 18.89603768436472 24.373303557323606 32.77527250793468 23.955386250376986 19 21.15096006089242 25.642673521850902 30.70256064109377 22.503805776162917 20 24.119644985710387 25.229244158492627 31.4836423432092 19.167468512587785 21 22.799471499763037 26.454273240367076 30.484087547213168 20.26216771265672 22 20.100242707989256 25.11668653329695 29.84913328833422 24.933937470379572 23 20.15373899556232 26.145143686001926 28.777771394924674 24.923345923511082 24 21.90224181758125 23.306250089758873 29.720419066220504 25.071089026439374 25 18.39320848472663 27.97784032973819 27.795270784564348 25.83368040097083 26 18.72441872154644 28.997321595266477 28.47025750025132 23.808002182935763 27 20.309021843719034 27.645193950970114 28.747432896267465 23.298351309043387 28 16.932293087848805 26.870754405365428 31.157279085464808 25.039673421320963 29 19.16531429966538 27.00072525168388 29.15529720957619 24.67866323907455 30 23.600300153667188 26.343331274863207 28.216419410894574 21.83994916057503 31 22.698582527897056 28.28714940184688 25.952341629446657 23.061926440809412 32 22.46072151771481 28.761614798006637 27.05476009248754 21.722903591791013 33 23.281297123407676 25.133740718932657 28.383191394637446 23.201770763022218 34 20.620305611006593 25.136792520572733 29.33032700952162 24.912574858899053 35 20.856191926009966 25.36926799844897 28.923001249443498 24.85153882609757 36 24.04227283824733 25.729560109721245 28.82103517111631 21.40713188091511 37 22.246556849679024 25.541784549984918 29.568188019703868 22.64347058063219 38 19.994147721560797 26.911145897660525 29.278625899383897 23.81608048139478 39 22.43792276428602 25.604436242478208 30.06760638221482 21.890034611020955 40 25.564762821157245 22.95924229150809 29.87354770145481 21.602447185879853 41 20.90914966035243 24.033296951070643 29.898141632318936 25.159411756257988 42 20.702165702057993 23.614302537662823 30.78280507245336 24.900726687825824 43 22.30795191796757 23.732604730651577 29.795457483017625 24.16398586836323 44 20.934820697677758 24.04837644152748 27.84176588013959 27.17503698065517 45 21.896317732044636 24.202402665479454 26.579576625353653 27.321702977122257 46 23.76204564059112 23.83600695092703 29.70013356120119 22.701813847280665 47 19.325623644641034 24.135622064884892 32.81871580186986 23.720038488604214 48 19.67765793971076 22.730177650759 32.245336129022995 25.346828280507243 49 21.87262138989818 20.74489092501903 33.22119458287257 24.16129310221022 50 22.898924329680746 20.855653372779365 30.491986327928654 25.75343596961124 51 20.66733925981244 20.562859933075785 28.713145007252518 30.056655799859257 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 120.0 1 269.5 2 419.0 3 1151.0 4 1883.0 5 1241.0 6 599.0 7 641.0 8 683.0 9 772.5 10 862.0 11 862.0 12 862.0 13 914.0 14 966.0 15 929.5 16 893.0 17 924.5 18 956.0 19 1030.5 20 1105.0 21 1441.0 22 1777.0 23 1957.0 24 2137.0 25 2790.5 26 4500.5 27 5557.0 28 6117.0 29 6677.0 30 7740.0 31 8803.0 32 9683.5 33 10564.0 34 12929.5 35 15295.0 36 16328.5 37 17362.0 38 19129.0 39 20896.0 40 23535.0 41 26174.0 42 30701.5 43 35229.0 44 39423.0 45 43617.0 46 51813.0 47 60009.0 48 67809.5 49 75610.0 50 71533.0 51 67456.0 52 55399.0 53 43342.0 54 36120.5 55 28899.0 56 25452.0 57 22005.0 58 18720.0 59 15435.0 60 14471.5 61 13508.0 62 11895.5 63 10283.0 64 7642.5 65 5002.0 66 4218.0 67 3434.0 68 2908.0 69 2382.0 70 1946.5 71 1511.0 72 1019.5 73 528.0 74 458.0 75 284.5 76 181.0 77 128.5 78 76.0 79 80.0 80 84.0 81 53.5 82 23.0 83 14.0 84 5.0 85 4.5 86 4.0 87 3.5 88 3.0 89 1.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 557048.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.32131485087365 #Duplication Level Percentage of deduplicated Percentage of total 1 65.71042341359106 18.61005590480532 2 13.841983329284144 7.840463360584011 3 6.122930223575924 5.202283040154718 4 3.208539230834163 3.6348019907133717 5 1.9289251388801234 2.731484809099458 6 1.190138827827615 2.0223777875493356 7 0.8533383768966653 1.6917365392496762 8 0.6230234239604896 1.4115874039563494 9 0.5026632988642419 1.2812476996001694 >10 5.3763387502450595 37.40500783991176 >50 0.545537746374139 9.449221179669694 >100 0.08718347063088473 4.421050319835083 >500 0.005128439448875572 1.1011321994907715 >1k 0.003846329586656679 3.1975499253802915 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTGC 4482 0.8045985265183612 TruSeq Adapter, Index 14 (95% over 21bp) CTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTGCT 4275 0.7674383536068705 TruSeq Adapter, Index 21 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTGC 3504 0.6290301733423331 TruSeq Adapter, Index 14 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTGC 2978 0.5346038402435697 TruSeq Adapter, Index 14 (95% over 21bp) TCCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTG 1267 0.22744898105728767 TruSeq Adapter, Index 21 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1106 0.19854662434835058 No Hit CGCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTG 921 0.16533584179460298 TruSeq Adapter, Index 21 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGC 879 0.1577960965661846 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTC 869 0.15600091913084688 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCG 812 0.14576840774942196 No Hit GCCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTG 725 0.13015036406198388 No Hit TGCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTG 678 0.12171303011589665 TruSeq Adapter, Index 21 (95% over 21bp) TTCCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCT 640 0.11489135586161336 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7951774353377087E-4 0.0 0.0 0.8685068432163835 0.0 2 1.7951774353377087E-4 0.0 0.0 3.1577171087590297 0.0 3 1.7951774353377087E-4 0.0 0.0 4.359588401717626 0.0 4 1.7951774353377087E-4 0.0 0.0 5.5388404589909666 0.0 5 1.7951774353377087E-4 0.0 0.0 7.456628513162241 0.0 6 1.7951774353377087E-4 0.0 0.0 8.519014519395096 0.0 7 1.7951774353377087E-4 0.0 0.0 9.543522281742327 0.0 8 1.7951774353377087E-4 0.0 0.0 11.127407332940788 0.0 9 1.7951774353377087E-4 0.0 0.0 11.827167497235427 0.0 10 1.7951774353377087E-4 0.0 0.0 13.37209719808706 0.0 11 1.7951774353377087E-4 0.0 0.0 15.898809438324884 0.0 12 1.7951774353377087E-4 0.0 0.0 18.394824144418433 0.0 13 1.7951774353377087E-4 0.0 0.0 19.153286610848617 0.0 14 1.7951774353377087E-4 0.0 0.0 19.398328330772213 0.0 15 1.7951774353377087E-4 0.0 0.0 19.812116729617557 0.0 16 1.7951774353377087E-4 0.0 0.0 20.803593227154572 0.0 17 1.7951774353377087E-4 0.0 0.0 22.237042409271734 0.0 18 1.7951774353377087E-4 0.0 0.0 23.82703106375034 0.0 19 1.7951774353377087E-4 0.0 0.0 24.850820755123436 0.0 20 1.7951774353377087E-4 0.0 0.0 25.961317516623343 0.0 21 1.7951774353377087E-4 0.0 0.0 27.42941362324252 0.0 22 1.7951774353377087E-4 0.0 0.0 28.83611466157315 0.0 23 1.7951774353377087E-4 0.0 0.0 30.186088092947106 0.0 24 1.7951774353377087E-4 0.0 0.0 31.208262124628398 0.0 25 1.7951774353377087E-4 0.0 0.0 32.06527983225862 0.0 26 1.7951774353377087E-4 0.0 0.0 32.81297123407678 0.0 27 1.7951774353377087E-4 0.0 0.0 33.62349384613175 0.0 28 1.7951774353377087E-4 0.0 0.0 34.43078513880312 0.0 29 1.7951774353377087E-4 0.0 0.0 35.26446553977395 0.0 30 1.7951774353377087E-4 0.0 0.0 36.21501199178527 0.0 31 1.7951774353377087E-4 0.0 0.0 37.09213568669127 0.0 32 1.7951774353377087E-4 0.0 0.0 37.88847639700708 0.0 33 1.7951774353377087E-4 0.0 0.0 38.64083526015711 0.0 34 1.7951774353377087E-4 0.0 0.0 39.42550731714323 0.0 35 1.7951774353377087E-4 0.0 0.0 40.2631371084718 0.0 36 1.7951774353377087E-4 0.0 0.0 41.03596099438469 0.0 37 1.7951774353377087E-4 0.0 0.0 41.77377892030848 0.0 38 1.7951774353377087E-4 0.0 0.0 42.53619077709641 0.0 39 1.7951774353377087E-4 0.0 0.0 43.28729301604171 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGGCGC 20 7.03015E-4 45.000004 2 GCGAATA 20 7.03015E-4 45.000004 9 GCGAAGT 20 7.03015E-4 45.000004 11 GCGCGAC 70 0.0 45.000004 9 TGGTTAG 40 6.8048394E-9 45.000004 1 ACGATGC 20 7.03015E-4 45.000004 38 TCGTGTA 20 7.03015E-4 45.000004 30 AACATCG 20 7.03015E-4 45.000004 25 AGGCACC 20 7.03015E-4 45.000004 6 TGCGAAG 20 7.03015E-4 45.000004 10 TACTCGA 80 0.0 45.000004 23 CGTCGTA 20 7.03015E-4 45.000004 18 TTCGGCA 20 7.03015E-4 45.000004 1 TTACGCG 20 7.03015E-4 45.000004 1 CTTTCGT 20 7.03015E-4 45.000004 15 CCGTTCA 20 7.03015E-4 45.000004 29 CCCATCG 20 7.03015E-4 45.000004 22 CTGGACG 80 0.0 45.000004 26 GGTAGCG 20 7.03015E-4 45.000004 1 AGCGTTG 25 3.8882077E-5 45.0 16 >>END_MODULE