##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933966.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1012538 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.4855165929575 34.0 31.0 34.0 31.0 34.0 2 32.71116837096484 34.0 31.0 34.0 31.0 34.0 3 32.7625570595869 34.0 31.0 34.0 31.0 34.0 4 36.11712745595721 37.0 35.0 37.0 35.0 37.0 5 36.15606722908177 37.0 35.0 37.0 35.0 37.0 6 35.787652414032856 37.0 35.0 37.0 35.0 37.0 7 36.115910711499225 37.0 35.0 37.0 35.0 37.0 8 36.13281081796436 37.0 37.0 37.0 35.0 37.0 9 37.98050147253733 39.0 39.0 39.0 35.0 39.0 10 37.64902551805463 39.0 37.0 39.0 35.0 39.0 11 37.58849445650435 39.0 37.0 39.0 35.0 39.0 12 37.42407791115 39.0 37.0 39.0 35.0 39.0 13 37.386669932387726 39.0 37.0 39.0 35.0 39.0 14 38.59107213753953 40.0 38.0 41.0 35.0 41.0 15 38.652328110154876 40.0 38.0 41.0 35.0 41.0 16 38.73002000912558 40.0 38.0 41.0 35.0 41.0 17 38.697923435959936 40.0 38.0 41.0 35.0 41.0 18 38.646771775479046 40.0 38.0 41.0 35.0 41.0 19 38.667444579857744 40.0 38.0 41.0 35.0 41.0 20 38.62702930655442 40.0 38.0 41.0 35.0 41.0 21 38.53250347147465 40.0 38.0 41.0 34.0 41.0 22 38.54741550440576 40.0 38.0 41.0 35.0 41.0 23 38.499751120451776 40.0 38.0 41.0 34.0 41.0 24 38.47507254048737 40.0 38.0 41.0 34.0 41.0 25 38.37511481050588 40.0 37.0 41.0 34.0 41.0 26 38.311506333589456 40.0 37.0 41.0 34.0 41.0 27 38.285303860200806 40.0 37.0 41.0 34.0 41.0 28 38.17728223533339 40.0 37.0 41.0 34.0 41.0 29 38.1665201701072 40.0 37.0 41.0 34.0 41.0 30 38.12082015687312 40.0 37.0 41.0 34.0 41.0 31 38.024269706420895 40.0 37.0 41.0 34.0 41.0 32 37.953644208908706 40.0 37.0 41.0 34.0 41.0 33 37.89081693724087 40.0 37.0 41.0 33.0 41.0 34 37.82148225548078 40.0 37.0 41.0 33.0 41.0 35 37.798496451491204 40.0 37.0 41.0 33.0 41.0 36 37.69412110952873 40.0 36.0 41.0 33.0 41.0 37 37.57448510574418 40.0 36.0 41.0 33.0 41.0 38 37.504334652131575 40.0 36.0 41.0 33.0 41.0 39 37.51538213874442 40.0 36.0 41.0 33.0 41.0 40 37.4288451396392 40.0 36.0 41.0 33.0 41.0 41 37.309174569250736 40.0 35.0 41.0 33.0 41.0 42 37.2885047277238 40.0 35.0 41.0 33.0 41.0 43 37.16866132431573 39.0 35.0 41.0 32.0 41.0 44 37.03880940764692 39.0 35.0 41.0 32.0 41.0 45 37.020883166853984 39.0 35.0 41.0 32.0 41.0 46 36.94275572867389 39.0 35.0 41.0 32.0 41.0 47 36.849030851187806 39.0 35.0 41.0 32.0 41.0 48 36.792051261286 39.0 35.0 41.0 31.0 41.0 49 36.76138080743636 39.0 35.0 41.0 31.0 41.0 50 36.66693003126796 39.0 35.0 41.0 31.0 41.0 51 35.68457973922954 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 13.0 10 18.0 11 16.0 12 17.0 13 10.0 14 15.0 15 17.0 16 30.0 17 85.0 18 115.0 19 249.0 20 390.0 21 706.0 22 1047.0 23 1655.0 24 2455.0 25 3707.0 26 4984.0 27 6445.0 28 7392.0 29 9010.0 30 11227.0 31 14663.0 32 19344.0 33 28148.0 34 54624.0 35 69003.0 36 70782.0 37 114094.0 38 219868.0 39 372157.0 40 247.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.660186580651786 4.508176483252974 54.21919967448135 18.612437261613884 2 18.816083939565726 4.429167102864287 54.80772079665158 21.947028160918407 3 20.209611886171185 4.584321773602571 52.86576898842314 22.34029735180309 4 19.226241385508494 4.533459484977354 51.69099826376886 24.549300865745284 5 18.775591632116523 5.588135951440835 50.12542739136704 25.5108450250756 6 21.9051531893124 6.3394163972117585 52.11359968712286 19.641830726352985 7 84.0310190827406 2.2287558590393646 8.986823210585678 4.75340184763436 8 85.44706470275683 2.6782204717255054 6.945122059616528 4.929592765901131 9 79.72727937124336 5.375699479920754 9.404190262488914 5.492830886346982 10 36.7183256332108 34.39841270154799 15.424606286381351 13.458655378859854 11 27.88231157744203 25.18512885442324 27.076712182653885 19.85584738548084 12 26.776674060627847 22.189883243888133 30.853459326958593 20.179983368525427 13 24.590188220096433 22.68151911335673 30.916074260916627 21.812218405630208 14 19.971596127750267 25.21446108689254 31.231519212118457 23.582423573238735 15 17.748765972240054 26.0479112882677 34.01650110909418 22.186821630398068 16 21.395838970981828 25.422255757314787 31.509829754537606 21.672075517165776 17 21.417566550588717 25.618890352757127 29.03367577315617 23.929867323497984 18 22.298718665373546 24.465847207709736 30.563297377481142 22.672136749435577 19 23.15705682157114 25.976111513839477 28.734822791835963 22.132008872753417 20 26.170968398223078 25.930977405292445 29.416673744590327 18.48138045189415 21 25.93532292121382 25.59775534350316 29.35929318208304 19.10762855319998 22 23.695406987194552 23.645729839275166 29.74782181014441 22.911041363385866 23 22.83084684229135 24.566189120803365 29.13085731103425 23.47210672587103 24 23.417590253402835 23.130094870513503 29.767870440418037 23.684444435665625 25 22.559449620656213 26.15161110002785 26.796920214352447 24.49201906496349 26 22.978989430520137 26.44918017891674 27.26524831660639 23.30658207395673 27 22.724579225668567 26.35130730896026 28.991306992922734 21.93280647244844 28 19.67491590439075 26.123957816891814 30.951628482091536 23.249497796625903 29 21.926485722017347 23.95110109447744 30.78373354876558 23.338679634739634 30 24.621594448800934 23.350333518346964 30.278271037728956 21.749800995123145 31 22.862450594446827 25.667678645147145 29.15120222648434 22.31866853392169 32 23.413837307834374 25.085181988231554 28.51270767121827 22.98827303271581 33 23.775996555191014 24.2768172651298 29.182114646561413 22.76507153311777 34 21.479391390742865 23.983988749064235 31.56582765288809 22.970792207304815 35 22.66966770629843 23.809378018405237 28.941728606728834 24.5792256685675 36 24.69892487985636 24.449156476102626 28.304419192168588 22.547499451872426 37 22.202623506475806 25.28221163057584 31.339959586701934 21.175205276246423 38 20.897586065905674 25.417021385864036 30.59381475065627 23.09157779757402 39 22.810699450292233 23.204264926353382 30.915679214014684 23.0693564093397 40 24.36530777116513 22.373382529840853 30.89316154060391 22.368148158390106 41 20.329607382636503 23.602472203512363 30.411698128860348 25.656222284990786 42 22.278077464747 23.255225976704082 29.595333705994243 24.871362852554668 43 22.94649682283529 22.841908155545767 30.333182557099093 23.878412464519847 44 22.52991986473594 22.81919295868402 30.01299704307394 24.6378901335061 45 23.420651866892896 21.723629137869395 28.274296865895405 26.581422129342307 46 23.018889167616425 22.771787330450806 30.220100381417787 23.989223120514982 47 20.33444670718531 23.456798658420723 32.82424955902889 23.384505075365073 48 21.05886396362408 22.22188204294555 32.464954401711346 24.25429959171903 49 22.422368345681843 21.52600692517219 32.86503815165456 23.186586577491415 50 21.63760767497121 21.76451649222054 30.980170620756947 25.617705212051302 51 19.94364655943777 21.073678222446958 29.734884024105764 29.24779119400951 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 247.0 1 699.5 2 1152.0 3 2249.5 4 3347.0 5 2376.0 6 1405.0 7 1438.5 8 1472.0 9 1566.5 10 1661.0 11 1648.5 12 1636.0 13 1664.5 14 1693.0 15 1615.0 16 1537.0 17 1883.5 18 2230.0 19 2210.0 20 2190.0 21 2637.5 22 3085.0 23 3920.5 24 4756.0 25 5554.5 26 8262.5 27 10172.0 28 11925.0 29 13678.0 30 15746.5 31 17815.0 32 20727.5 33 23640.0 34 26320.0 35 29000.0 36 31311.5 37 33623.0 38 36234.5 39 38846.0 40 42530.5 41 46215.0 42 51114.5 43 56014.0 44 60838.5 45 65663.0 46 75369.0 47 85075.0 48 96560.0 49 108045.0 50 106636.5 51 105228.0 52 90533.5 53 75839.0 54 67151.5 55 58464.0 56 53583.5 57 48703.0 58 46545.5 59 44388.0 60 42558.5 61 40729.0 62 34651.0 63 28573.0 64 23771.5 65 18970.0 66 15568.5 67 12167.0 68 9943.0 69 7719.0 70 6181.5 71 4644.0 72 3766.0 73 2888.0 74 2417.0 75 1493.0 76 1040.0 77 677.0 78 314.0 79 245.5 80 177.0 81 138.0 82 99.0 83 89.5 84 80.0 85 46.5 86 13.0 87 8.0 88 3.0 89 2.0 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1012538.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.767968571272874 #Duplication Level Percentage of deduplicated Percentage of total 1 69.29496434654597 19.934753564689085 2 12.483375655896598 7.182427170644525 3 5.001672028169482 4.316638311305828 4 2.3680586990984858 2.7249695292237823 5 1.3768774592556225 1.9804983737179898 6 0.8925054155064163 1.540534064578765 7 0.6611405733703237 1.331376986513756 8 0.49154116584212254 1.1312512648346404 9 0.3871309813378343 1.0023274713683559 >10 6.647958003073977 47.02104427021379 >50 0.32170758801366195 5.704946695583363 >100 0.06856625881573149 3.3808656070603487 >500 0.0020777654186574027 0.44909515150493556 >1k 0.0017314711822145024 1.1311061113990768 >5k 6.925884728858009E-4 1.1681654273617734 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC 6683 0.6600246114219911 No Hit CTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGCT 5043 0.4980553816251835 No Hit GCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC 3593 0.3548508796706889 No Hit TCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC 3385 0.3343084407696304 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1655 0.1634506556790955 No Hit CGCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTG 1433 0.14152555262123495 No Hit TCCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTG 1288 0.1272051024257855 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.87617254858583E-5 0.0 0.0 0.5229433364476197 0.0 2 9.87617254858583E-5 0.0 0.0 1.9710865172467602 0.0 3 9.87617254858583E-5 0.0 0.0 2.7180214470963064 0.0 4 9.87617254858583E-5 0.0 0.0 3.4442164145938228 0.0 5 1.975234509717166E-4 0.0 0.0 4.62106113548331 0.0 6 1.975234509717166E-4 0.0 0.0 5.288591638042226 0.0 7 1.975234509717166E-4 0.0 0.0 5.914642215897082 0.0 8 1.975234509717166E-4 0.0 0.0 6.8874452119327865 0.0 9 1.975234509717166E-4 0.0 0.0 7.338094965324758 0.0 10 1.975234509717166E-4 0.0 0.0 8.220037173913473 0.0 11 1.975234509717166E-4 0.0 0.0 9.974045418542316 0.0 12 1.975234509717166E-4 0.0 0.0 11.650031900037332 0.0 13 1.975234509717166E-4 0.0 0.0 12.182061315229651 0.0 14 1.975234509717166E-4 0.0 0.0 12.386004278357948 0.0 15 1.975234509717166E-4 0.0 0.0 12.693350768069939 0.0 16 1.975234509717166E-4 0.0 0.0 13.376189338079163 0.0 17 1.975234509717166E-4 0.0 0.0 14.307512409410807 0.0 18 1.975234509717166E-4 0.0 0.0 15.269056568741124 0.0 19 1.975234509717166E-4 0.0 0.0 16.00502894706174 0.0 20 1.975234509717166E-4 0.0 0.0 16.819220611967157 0.0 21 1.975234509717166E-4 0.0 0.0 17.9195249956051 0.0 22 1.975234509717166E-4 0.0 0.0 19.0928142943771 0.0 23 1.975234509717166E-4 0.0 0.0 20.12438051707689 0.0 24 1.975234509717166E-4 0.0 0.0 20.959114620883366 0.0 25 1.975234509717166E-4 0.0 0.0 21.64926155857854 0.0 26 1.975234509717166E-4 0.0 0.0 22.296348383961885 0.0 27 1.975234509717166E-4 0.0 0.0 22.926349430836176 0.0 28 1.975234509717166E-4 0.0 0.0 23.566621697160997 0.0 29 1.975234509717166E-4 0.0 0.0 24.273163081286825 0.0 30 1.975234509717166E-4 0.0 0.0 25.066812307291183 0.0 31 1.975234509717166E-4 0.0 0.0 25.754095154947272 0.0 32 1.975234509717166E-4 0.0 0.0 26.45550092934784 0.0 33 1.975234509717166E-4 0.0 0.0 27.101106328848893 0.0 34 1.975234509717166E-4 0.0 0.0 27.793228501053786 0.0 35 1.975234509717166E-4 0.0 0.0 28.469845082357402 0.0 36 1.975234509717166E-4 0.0 0.0 29.142017386014153 0.0 37 1.975234509717166E-4 0.0 0.0 29.825646049827267 0.0 38 1.975234509717166E-4 0.0 0.0 30.522706308306454 0.0 39 1.975234509717166E-4 0.0 0.0 31.3478605247408 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGATA 20 7.032888E-4 45.0 14 CGTTGAC 25 3.890475E-5 45.0 31 ACGATAA 20 7.032888E-4 45.0 45 GCGCTAA 20 7.032888E-4 45.0 45 TACGGGA 190 0.0 42.63158 4 TCTACGG 70 0.0 41.785713 2 GCGCGAC 60 3.6379788E-12 41.250004 9 TTCGTTG 300 0.0 41.250004 1 TTCGACG 55 6.184564E-11 40.909092 25 TACGGAT 45 1.9279469E-8 40.0 43 CGTTTCG 45 1.9279469E-8 40.0 32 CATACGA 210 0.0 39.642857 18 TGCGTAT 40 3.4576806E-7 39.375 16 TCGGGTC 75 0.0 39.000004 5 CGCTTGG 325 0.0 38.76923 2 TCTAGCG 35 6.2475538E-6 38.571426 1 GCATCCG 35 6.2475538E-6 38.571426 9 ACACGCG 440 0.0 38.352272 36 CTTTGCG 405 0.0 38.333332 1 CGGTAGG 270 0.0 38.333332 31 >>END_MODULE