##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933965.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1186471 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.296115117857916 33.0 31.0 34.0 31.0 34.0 2 32.5352360066112 34.0 31.0 34.0 31.0 34.0 3 32.589594688787166 34.0 31.0 34.0 31.0 34.0 4 35.98929935919209 37.0 35.0 37.0 35.0 37.0 5 36.040748572868615 37.0 35.0 37.0 35.0 37.0 6 35.67848940260655 37.0 35.0 37.0 35.0 37.0 7 36.010726768711585 37.0 35.0 37.0 35.0 37.0 8 35.999222062738994 37.0 35.0 37.0 35.0 37.0 9 37.83397234319254 39.0 38.0 39.0 35.0 39.0 10 37.50421122808733 39.0 37.0 39.0 35.0 39.0 11 37.48447538962183 39.0 37.0 39.0 35.0 39.0 12 37.32385283753248 39.0 37.0 39.0 35.0 39.0 13 37.23301454481399 39.0 37.0 39.0 34.0 39.0 14 38.36172734099696 40.0 38.0 41.0 34.0 41.0 15 38.39448330384813 40.0 38.0 41.0 34.0 41.0 16 38.46848679824454 40.0 38.0 41.0 34.0 41.0 17 38.43974610420314 40.0 38.0 41.0 34.0 41.0 18 38.39113387516425 40.0 38.0 41.0 34.0 41.0 19 38.41964110374379 40.0 38.0 41.0 34.0 41.0 20 38.392682164165834 40.0 38.0 41.0 34.0 41.0 21 38.31560737683433 40.0 37.0 41.0 34.0 41.0 22 38.317095824508144 40.0 37.0 41.0 34.0 41.0 23 38.28027655121785 40.0 37.0 41.0 34.0 41.0 24 38.26524879242729 40.0 37.0 41.0 34.0 41.0 25 38.14798338939595 40.0 37.0 41.0 34.0 41.0 26 38.08687359404486 40.0 37.0 41.0 34.0 41.0 27 38.102847014381304 40.0 37.0 41.0 34.0 41.0 28 38.01443524536209 40.0 37.0 41.0 34.0 41.0 29 38.02376543548051 40.0 37.0 41.0 34.0 41.0 30 37.9829131938328 40.0 37.0 41.0 34.0 41.0 31 37.83362340925316 40.0 36.0 41.0 33.0 41.0 32 37.660851381955396 40.0 36.0 41.0 33.0 41.0 33 37.63686259504025 40.0 36.0 41.0 33.0 41.0 34 37.58568308875649 40.0 36.0 41.0 33.0 41.0 35 37.49756968354052 40.0 36.0 41.0 33.0 41.0 36 37.434644420301886 39.0 36.0 41.0 33.0 41.0 37 37.390586032022696 39.0 36.0 41.0 33.0 41.0 38 37.35866700492469 39.0 35.0 41.0 33.0 41.0 39 37.42192097404825 39.0 36.0 41.0 33.0 41.0 40 37.315976538828174 39.0 35.0 41.0 33.0 41.0 41 37.12397858860436 39.0 35.0 41.0 32.0 41.0 42 37.05755387194461 39.0 35.0 41.0 32.0 41.0 43 37.01749052442074 39.0 35.0 41.0 32.0 41.0 44 36.96076768838008 39.0 35.0 41.0 31.0 41.0 45 37.05069150446998 39.0 35.0 41.0 32.0 41.0 46 36.98503545387961 39.0 35.0 41.0 32.0 41.0 47 36.885059980395646 39.0 35.0 41.0 31.0 41.0 48 36.84481120903924 39.0 35.0 41.0 31.0 41.0 49 36.8755114958562 39.0 35.0 41.0 32.0 41.0 50 36.80830884193546 39.0 35.0 41.0 31.0 41.0 51 35.76706889591065 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 22.0 10 36.0 11 17.0 12 18.0 13 11.0 14 25.0 15 25.0 16 45.0 17 85.0 18 146.0 19 263.0 20 525.0 21 782.0 22 1279.0 23 1812.0 24 2737.0 25 4172.0 26 5852.0 27 7323.0 28 8834.0 29 11091.0 30 14207.0 31 18967.0 32 25628.0 33 37092.0 34 69410.0 35 84331.0 36 87610.0 37 142985.0 38 285510.0 39 375457.0 40 171.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.824553655335865 5.228867793650245 55.114537144186414 17.83204140682747 2 19.78986422761281 4.829279434558451 52.74043781938202 22.640418518446722 3 20.679308638812074 5.209061156994145 51.59106290840653 22.520567295787256 4 19.826021874955224 4.873444020123543 51.61634797647814 23.684186128443088 5 18.624475440191965 5.50877349720305 49.7042068453422 26.16254421726279 6 21.75839106054847 6.51596204205581 52.3212113907546 19.404435506641125 7 78.7214352478906 2.4276193855559893 12.266629357144001 6.584316009409416 8 78.64338867110953 3.55904189820063 10.290854138027814 7.506715292662021 9 72.0827563421272 6.026611691309776 13.61820052913219 8.272431437430834 10 34.04069715989687 30.93855644175037 20.132055482182036 14.888690916170727 11 28.40507690453454 24.300383237348406 27.30011942980486 19.994420428312196 12 27.43219176869894 20.71588770395568 31.371015389335266 20.480905138010115 13 25.012663604925866 21.88152934205724 32.48692972689598 20.618877326120906 14 20.38145053692842 25.260204421347005 30.847277346011833 23.511067695712747 15 17.229076816879637 25.751661861099006 35.39471255513199 21.624548766889372 16 20.023582540154795 24.735539258860943 31.801451531474434 23.43942666950983 17 19.464192550850377 25.666535465257894 29.844134412050526 25.0251375718412 18 19.40856540109282 24.838618053032903 32.43222969630104 23.32058684957323 19 20.64331955859014 26.11652539337245 31.091193969342694 22.148961078694718 20 23.448950711816806 26.777392789204285 31.07475867509615 18.698897823882756 21 23.60807807354752 26.788855353396755 30.07743130679132 19.52563526626441 22 20.24811394463076 25.842098121235157 29.380743397858016 24.529044536276064 23 20.436319134643828 25.258181615901275 29.57434273572637 24.73115651372853 24 22.243948651083763 22.73380470319123 29.363549551569317 25.65869709415569 25 19.558421571197275 26.629980842346757 26.593317493642914 27.218280092813057 26 17.88792140726575 28.344561308283133 27.626043957248008 26.14147332720311 27 18.331084367000962 27.563758406231585 28.4461229983708 25.65903422839665 28 15.40214636514504 27.60016890425472 31.265913789717576 25.73177094088267 29 18.44124298023298 25.75857311303858 30.76906220211029 25.031121704618148 30 23.159183831716074 25.417646111872944 28.08109089897688 23.342079157434107 31 22.227176222596253 28.485399137442048 26.766773060614206 22.520651579347494 32 21.784434680662233 27.769410293214076 28.32762031267515 22.118534713448536 33 24.604394039129485 25.018310603461863 26.993242986975662 23.38405237043299 34 21.824722222456344 24.871994342887437 29.35099130109375 23.952292133562473 35 19.886958889007822 24.968836153601732 29.028438116060144 26.115766841330295 36 21.8011228255895 27.94109590542036 26.787253965752218 23.47052730323792 37 20.03850073031705 28.249742303014568 29.352508405178046 22.359248561490336 38 20.118148694742644 27.409098073193526 30.389786181036033 22.082967051027797 39 25.410229158571934 22.6353615048324 30.555403376905126 21.399005959690545 40 26.564661083161745 21.826239326540637 29.793479992347056 21.815619597950562 41 22.043775195516787 23.676937742262556 28.528215186043315 25.751071876177335 42 22.42962533428967 23.397032038709753 28.61460583528801 25.558736791712565 43 23.07009610854374 23.153789683860794 28.72451159783931 25.051602609756156 44 20.509982966292476 22.85921864082645 28.743391115332784 27.88740727754829 45 21.665257726484676 21.38282351612471 27.739826763570285 29.212091993820327 46 23.00140500694918 22.66123655782569 30.121090190994977 24.216268244230157 47 18.803578005699254 23.521181722941396 33.18521902347381 24.490021247885537 48 18.98242772052583 22.238470219668244 32.92461425521568 25.854487804590253 49 22.86848983245271 20.081991047400233 33.983890040295975 23.06562907985109 50 23.209753967859307 18.906403949190498 31.125328811239385 26.758513271710815 51 20.869452350710638 18.549884489380695 29.26898339698147 31.311679762927202 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 255.0 1 726.5 2 1198.0 3 2890.0 4 4582.0 5 3159.5 6 1737.0 7 1805.0 8 1873.0 9 1964.0 10 2055.0 11 1990.0 12 1925.0 13 2046.0 14 2167.0 15 2150.0 16 2133.0 17 2100.0 18 2067.0 19 2204.0 20 2341.0 21 2424.5 22 2508.0 23 3372.5 24 4237.0 25 5068.5 26 7560.5 27 9221.0 28 10966.5 29 12712.0 30 14830.5 31 16949.0 32 19082.5 33 21216.0 34 24696.5 35 28177.0 36 31019.0 37 33861.0 38 37006.5 39 40152.0 40 46111.0 41 52070.0 42 59448.0 43 66826.0 44 76655.5 45 86485.0 46 106815.0 47 127145.0 48 151020.0 49 174895.0 50 165230.0 51 155565.0 52 125142.0 53 94719.0 54 78818.5 55 62918.0 56 54283.0 57 45648.0 58 42602.5 59 39557.0 60 34807.5 61 30058.0 62 25660.5 63 21263.0 64 17224.5 65 13186.0 66 10443.0 67 7700.0 68 6042.5 69 4385.0 70 3536.5 71 2688.0 72 2376.5 73 2065.0 74 1506.0 75 738.0 76 529.0 77 429.5 78 330.0 79 227.5 80 125.0 81 91.0 82 57.0 83 43.0 84 29.0 85 16.0 86 3.0 87 3.0 88 3.0 89 4.5 90 6.0 91 4.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1186471.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.650084376678898 #Duplication Level Percentage of deduplicated Percentage of total 1 64.44922577894947 19.7537420813643 2 14.129155483396163 8.661196154746154 3 6.2845298312976166 5.7786410879108265 4 3.4775347879146357 4.26346938689679 5 2.1105102622980265 3.234365880864061 6 1.4034608768688874 2.580971657723949 7 0.956647048315745 2.052491892470488 8 0.7201942148407584 1.7659210761972206 9 0.5717499906370405 1.5771766909851592 >10 5.624182301314373 35.40651269714281 >50 0.18437106886544175 3.7515439802173938 >100 0.07790337884263326 4.461854415569596 >500 0.005544724452261744 1.1479020962993682 >1k 0.003881307116583221 2.2042881249612787 >5k 5.544724452261744E-4 1.3175934491981645 >10k+ 5.544724452261744E-4 2.0423293274524625 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCACATGGTGTCGTATGCCGTCTTCTGCT 12030 1.0139312296718588 TruSeq Adapter, Index 21 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCACATGGTGTCGTATGCCGTCTTCTGC 12005 1.0118241406658905 TruSeq Adapter, Index 14 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCACATGGTGTCGTATGCCGTCTTCTGC 8859 0.7466680601548625 TruSeq Adapter, Index 14 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCACATGGTGTCGTATGCCGTCTTCTGC 6647 0.5602328249068035 TruSeq Adapter, Index 14 (95% over 21bp) TCCTGTCTCTTATACACATCTGACGCACATGGTGTCGTATGCCGTCTTCTG 3083 0.2598462162159884 TruSeq Adapter, Index 21 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCACATGGTGTCGTATGCCGTCTTCTG 3052 0.257233425848588 TruSeq Adapter, Index 21 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2428 0.2046404842596237 No Hit GCCTGTCTCTTATACACATCTGACGCACATGGTGTCGTATGCCGTCTTCTG 1909 0.16089731649572556 No Hit TTCCTGTCTCTTATACACATCTGACGCACATGGTGTCGTATGCCGTCTTCT 1900 0.16013876445357703 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACATGGTGTCGTATGCC 1758 0.14817049889967812 No Hit CGTTCTGTCTCTTATACACATCTGACGCACATGGTGTCGTATGCCGTCTTC 1723 0.14522057429132276 No Hit TGCTGTCTCTTATACACATCTGACGCACATGGTGTCGTATGCCGTCTTCTG 1675 0.14117496339986396 TruSeq Adapter, Index 21 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCACATGGTGTCGTATGC 1661 0.1399949935565218 No Hit GAATCTGTCTCTTATACACATCTGACGCACATGGTGTCGTATGCCGTCTTC 1518 0.12794244444238417 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACATGGTGTCGTATGCCG 1481 0.12482395271355136 No Hit TTCTGTCTCTTATACACATCTGACGCACATGGTGTCGTATGCCGTCTTCTG 1479 0.12465538559307392 TruSeq Adapter, Index 21 (95% over 21bp) CGTCTGTCTCTTATACACATCTGACGCACATGGTGTCGTATGCCGTCTTCT 1243 0.10476446537673488 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.428356023872476E-5 0.0 0.0 1.083718017549523 0.0 2 8.428356023872476E-5 0.0 0.0 3.635992788698586 0.0 3 8.428356023872476E-5 0.0 0.0 5.04546676657078 0.0 4 8.428356023872476E-5 0.0 0.0 6.436819778991648 0.0 5 8.428356023872476E-5 0.0 0.0 8.675475422492417 0.0 6 8.428356023872476E-5 0.0 0.0 9.905341133495888 0.0 7 8.428356023872476E-5 0.0 0.0 11.10806753810249 0.0 8 8.428356023872476E-5 0.0 0.0 12.876926616832607 0.0 9 8.428356023872476E-5 0.0 0.0 13.662449398257522 0.0 10 1.6856712047744952E-4 0.0 0.0 15.386301055820159 0.0 11 1.6856712047744952E-4 0.0 0.0 18.514316826959952 0.0 12 1.6856712047744952E-4 0.0 0.0 21.59100390991436 0.0 13 1.6856712047744952E-4 0.0 0.0 22.56582756763545 3.3713424095489905E-4 14 1.6856712047744952E-4 0.0 0.0 22.934146725878676 3.3713424095489905E-4 15 1.6856712047744952E-4 0.0 0.0 23.499436564399804 3.3713424095489905E-4 16 1.6856712047744952E-4 0.0 0.0 24.63254474824922 3.3713424095489905E-4 17 1.6856712047744952E-4 0.0 0.0 26.226262588803266 3.3713424095489905E-4 18 1.6856712047744952E-4 0.0 0.0 27.90873101828869 3.3713424095489905E-4 19 1.6856712047744952E-4 0.0 0.0 29.150480711285823 3.3713424095489905E-4 20 1.6856712047744952E-4 0.0 0.0 30.560713241200165 3.3713424095489905E-4 21 1.6856712047744952E-4 0.0 0.0 32.37154553292917 3.3713424095489905E-4 22 1.6856712047744952E-4 0.0 0.0 34.25418741798156 3.3713424095489905E-4 23 1.6856712047744952E-4 0.0 0.0 35.880691563468474 3.3713424095489905E-4 24 2.528506807161743E-4 0.0 0.0 37.13710659594714 3.3713424095489905E-4 25 2.528506807161743E-4 0.0 0.0 38.24669966648995 3.3713424095489905E-4 26 2.528506807161743E-4 0.0 0.0 39.200368150591125 3.3713424095489905E-4 27 2.528506807161743E-4 0.0 0.0 40.12588592557256 3.3713424095489905E-4 28 2.528506807161743E-4 0.0 0.0 41.084021438366385 3.3713424095489905E-4 29 2.528506807161743E-4 0.0 0.0 42.056738007081506 3.3713424095489905E-4 30 2.528506807161743E-4 0.0 0.0 43.128150624836174 3.3713424095489905E-4 31 2.528506807161743E-4 0.0 0.0 44.12202236717122 3.3713424095489905E-4 32 2.528506807161743E-4 0.0 0.0 45.09752029337422 3.3713424095489905E-4 33 2.528506807161743E-4 0.0 0.0 46.01637966709679 3.3713424095489905E-4 34 2.528506807161743E-4 0.0 0.0 46.91871946301258 3.3713424095489905E-4 35 2.528506807161743E-4 0.0 0.0 47.80706818792874 3.3713424095489905E-4 36 2.528506807161743E-4 0.0 0.0 48.740508617572615 3.3713424095489905E-4 37 2.528506807161743E-4 0.0 0.0 49.62085040426609 3.3713424095489905E-4 38 2.528506807161743E-4 0.0 0.0 50.53675985338032 3.3713424095489905E-4 39 2.528506807161743E-4 0.0 0.0 51.50087949895109 3.3713424095489905E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGGAT 20 7.033378E-4 45.000004 4 GGCGTAA 20 7.033378E-4 45.000004 8 TCTAGCG 45 3.8562575E-10 45.000004 1 AAAGTCG 20 7.033378E-4 45.000004 32 GTGCTCG 30 2.1655615E-6 45.000004 1 CGACTTG 20 7.033378E-4 45.000004 18 CCGTTGT 20 7.033378E-4 45.000004 29 GCGTAAG 20 7.033378E-4 45.000004 44 ACAACGA 25 3.8908827E-5 45.0 27 CGTATAA 35 1.2119744E-7 45.0 28 GACCGAC 25 3.8908827E-5 45.0 14 TTATCCG 25 3.8908827E-5 45.0 1 TTGTTCG 280 0.0 44.196426 1 TCGATTG 95 0.0 42.63158 1 TCTCGCG 95 0.0 42.63158 1 GCGCGAC 120 0.0 41.250004 9 CGAATAG 120 0.0 41.250004 26 AGTGCGA 50 1.0822987E-9 40.5 10 CGTTTTT 1630 0.0 40.030674 1 TACGCGT 45 1.9283107E-8 40.000004 24 >>END_MODULE