SRR2933963.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933963.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	853058
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGCT	6258	0.7335960743583672	No Hit
CCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGC	6067	0.7112060375730607	No Hit
TCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGC	4770	0.5591647930152464	No Hit
GCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGC	4746	0.5563513852516476	No Hit
TCCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTG	1704	0.19975195121550937	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1629	0.19096005195426338	No Hit
CGCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTG	1235	0.14477327450185098	No Hit
GCCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTG	1224	0.14348379594353491	No Hit
TGCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTG	1119	0.13117513697779049	No Hit
TTCCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCT	925	0.10843342422203414	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACCGTA	20	7.032262E-4	45.000004	24
TCGTTAG	40	6.8121153E-9	45.000004	1
ACACGTC	20	7.032262E-4	45.000004	37
ACGTTGA	20	7.032262E-4	45.000004	12
TTACTCG	40	6.8121153E-9	45.000004	1
TGTTCGA	20	7.032262E-4	45.000004	31
TACTCCG	20	7.032262E-4	45.000004	20
ACGTCGG	20	7.032262E-4	45.000004	39
CCGACAC	20	7.032262E-4	45.000004	11
TTACGTA	20	7.032262E-4	45.000004	19
AACCTCG	20	7.032262E-4	45.000004	43
CGTCGGC	20	7.032262E-4	45.000004	40
TCCCCGT	20	7.032262E-4	45.000004	19
CACGTCG	20	7.032262E-4	45.000004	38
TGTACCG	20	7.032262E-4	45.000004	1
TGTCGCG	20	7.032262E-4	45.000004	1
CCGTTTA	20	7.032262E-4	45.000004	23
TACCGTT	20	7.032262E-4	45.000004	21
TTGATCG	25	3.8899576E-5	45.0	13
CGGCGAA	50	2.1827873E-11	45.0	13