##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933963.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 853058 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33946109174288 33.0 31.0 34.0 31.0 34.0 2 32.570152322585336 34.0 31.0 34.0 31.0 34.0 3 32.632553706781955 34.0 31.0 34.0 31.0 34.0 4 36.03413601419833 37.0 35.0 37.0 35.0 37.0 5 36.07781885874114 37.0 35.0 37.0 35.0 37.0 6 35.73277549709398 37.0 35.0 37.0 35.0 37.0 7 36.02923130666379 37.0 35.0 37.0 35.0 37.0 8 36.032058781466205 37.0 35.0 37.0 35.0 37.0 9 37.87653711705418 39.0 38.0 39.0 35.0 39.0 10 37.554389033336534 39.0 37.0 39.0 35.0 39.0 11 37.53610891639256 39.0 37.0 39.0 35.0 39.0 12 37.37473184707253 39.0 37.0 39.0 35.0 39.0 13 37.302868034764344 39.0 37.0 39.0 34.0 39.0 14 38.52503581233633 40.0 38.0 41.0 34.0 41.0 15 38.586057454475544 40.0 38.0 41.0 35.0 41.0 16 38.638062124732436 40.0 38.0 41.0 35.0 41.0 17 38.62157672749098 40.0 38.0 41.0 35.0 41.0 18 38.58334720499661 40.0 38.0 41.0 35.0 41.0 19 38.60903947914444 40.0 38.0 41.0 35.0 41.0 20 38.561226786455315 40.0 38.0 41.0 34.0 41.0 21 38.46890129393312 40.0 38.0 41.0 34.0 41.0 22 38.457630079080204 40.0 38.0 41.0 34.0 41.0 23 38.42063728374858 40.0 38.0 41.0 34.0 41.0 24 38.39478206640111 40.0 37.0 41.0 34.0 41.0 25 38.27627547013216 40.0 37.0 41.0 34.0 41.0 26 38.17375489122662 40.0 37.0 41.0 34.0 41.0 27 38.16289162049943 40.0 37.0 41.0 34.0 41.0 28 38.11547163264397 40.0 37.0 41.0 34.0 41.0 29 38.11576586820591 40.0 37.0 41.0 34.0 41.0 30 38.095691031559404 40.0 37.0 41.0 34.0 41.0 31 38.021514363618884 40.0 37.0 41.0 34.0 41.0 32 37.9301114343925 40.0 37.0 41.0 34.0 41.0 33 37.880165240815984 40.0 37.0 41.0 34.0 41.0 34 37.83972250421425 40.0 37.0 41.0 33.0 41.0 35 37.78286001655221 40.0 37.0 41.0 33.0 41.0 36 37.67480054111209 40.0 36.0 41.0 33.0 41.0 37 37.621858068267336 40.0 36.0 41.0 33.0 41.0 38 37.58931866297485 40.0 36.0 41.0 33.0 41.0 39 37.58577728595242 40.0 36.0 41.0 33.0 41.0 40 37.48889876186613 40.0 36.0 41.0 33.0 41.0 41 37.36944850174314 40.0 36.0 41.0 33.0 41.0 42 37.3181589059595 39.0 35.0 41.0 33.0 41.0 43 37.19816120357584 39.0 35.0 41.0 32.0 41.0 44 37.073905877443266 39.0 35.0 41.0 32.0 41.0 45 37.11134295675089 39.0 35.0 41.0 32.0 41.0 46 37.03969835579761 39.0 35.0 41.0 32.0 41.0 47 36.967664566770374 39.0 35.0 41.0 32.0 41.0 48 36.928056474471845 39.0 35.0 41.0 32.0 41.0 49 36.93338084866445 39.0 35.0 41.0 32.0 41.0 50 36.863283621981154 39.0 35.0 41.0 32.0 41.0 51 35.90458327569755 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 11.0 10 19.0 11 15.0 12 2.0 13 15.0 14 17.0 15 18.0 16 29.0 17 38.0 18 93.0 19 174.0 20 302.0 21 510.0 22 837.0 23 1288.0 24 1869.0 25 2805.0 26 3988.0 27 5031.0 28 6148.0 29 7703.0 30 9767.0 31 12714.0 32 16856.0 33 24241.0 34 45055.0 35 63012.0 36 60512.0 37 96686.0 38 190131.0 39 302976.0 40 190.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.166117661401685 4.544474115476322 54.87844906208019 16.410959161041806 2 19.726208534472452 4.7703673138286025 53.283832986737124 22.21959116496182 3 20.811011677986727 4.542598510300589 53.093107385429825 21.553282426282856 4 19.799239911002534 4.785137704587496 51.04459485755951 24.37102752685046 5 18.100996649700253 5.6787463455005405 50.23878798393544 25.981469020863763 6 21.326451425342707 6.253267655892096 52.58306000295407 19.83722091581112 7 81.70476098928795 2.3074632674448865 10.338687404607894 5.649088338659271 8 82.78944690747873 2.994403663056908 7.986795739562844 6.229353689901507 9 76.73112496453935 5.637131355663976 11.22561420208239 6.406129477714294 10 34.37773281535371 33.90050852345327 17.10329192153406 14.618466739658967 11 29.65800684126988 25.088212055921165 25.96329909572386 19.2904820070851 12 27.942883133386005 21.663825906327588 30.436500214522344 19.956790745764064 13 24.078550344759677 23.83624560111974 30.745154491253817 21.34004956286677 14 18.936930431459526 27.63493220859543 30.06372368584551 23.36441367409953 15 17.31629033430318 25.967636432692736 35.14673093740402 21.569342295600062 16 18.596508092064077 24.90534055128725 33.17136701138727 23.3267843452614 17 18.86776749060439 24.44359000208661 30.336858689561552 26.351783817747442 18 19.71518935406502 24.69878953130971 31.42740587392651 24.158615240698754 19 22.60162849419383 25.2737797429952 29.657186264005496 22.467405498805473 20 26.426456348806294 25.294059723957808 28.987595216269003 19.291888710966898 21 24.430343540533002 26.503238935687847 28.570273064668523 20.496144459110635 22 21.39115980390548 25.43308895760898 27.739731647789483 25.436019590696063 23 21.842360073992626 26.15543140091295 27.61711395942597 24.385094565668457 24 22.369991254990868 22.9608068853466 28.879865143987864 25.789336715674665 25 20.7529851428625 26.19657748945558 26.807673100773922 26.24276426690799 26 20.529436450979887 28.816915145277346 27.45065400007971 23.20299440366306 27 22.048207742029263 26.987027845703338 28.061749611398053 22.903014800869343 28 18.59615641609363 26.204548811452444 30.204276848701966 24.99501792375196 29 19.745902388817644 24.518379758468946 31.055918823807993 24.679799028905418 30 21.421052261393715 23.391258273177204 31.406774216993448 23.780915248435626 31 20.448433752452942 26.46021724196948 28.611653603858123 24.47969540171946 32 21.808833631476407 26.648832787454076 27.562955859976697 23.97937772109282 33 23.488555291668327 24.671358805614624 27.79857876017809 24.041507142538958 34 19.802991121354 24.113952392451626 30.20521465128983 25.87784183490454 35 19.93615908883101 24.183349783953727 28.43054047907645 27.449950648138817 36 21.77460383701929 26.22072590609314 27.860590956300747 24.144079300586828 37 21.439573862504073 25.28772955648971 29.547697811872116 23.724998769134103 38 19.371015804318112 24.830433569581437 29.87932825200631 25.91922237409414 39 21.38084397543895 21.958178693594103 33.132213753343855 23.528763577623092 40 21.84259452463959 21.84259452463959 33.48037296408919 22.834437986631624 41 19.220264038318614 24.045375578213907 29.512647440150612 27.221712943316867 42 22.980969640985723 23.55080193843795 26.556224781902287 26.912003638674044 43 23.697568043439016 23.009103718621713 28.138766648926566 25.1545615890127 44 21.566646113159948 22.51546788143362 29.479472673604846 26.43841333180159 45 20.58382900107613 22.012571243690346 29.176210761753595 28.22738899347993 46 20.864349200171617 22.819198694578798 30.941624133411793 25.37482797183779 47 18.641639841605144 23.17228136891044 33.03585453744059 25.150224252043824 48 19.23585500634189 21.33688447913272 32.37341423443658 27.053846280088813 49 21.206881595389763 19.763251736693167 33.94540582234737 25.084460845569705 50 20.372354517512292 19.969685531347224 31.79045270075423 27.867507250386257 51 18.492998131428344 19.886103875703647 29.883196687681256 31.73770130518675 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 122.0 1 508.0 2 894.0 3 1974.5 4 3055.0 5 2093.5 6 1132.0 7 1104.0 8 1076.0 9 1191.5 10 1307.0 11 1338.0 12 1369.0 13 1281.5 14 1194.0 15 1209.0 16 1224.0 17 1286.0 18 1348.0 19 1263.5 20 1179.0 21 1606.5 22 2034.0 23 2575.0 24 3116.0 25 3914.0 26 5794.0 27 6876.0 28 8089.0 29 9302.0 30 10513.0 31 11724.0 32 13727.0 33 15730.0 34 18336.5 35 20943.0 36 22955.0 37 24967.0 38 28155.5 39 31344.0 40 35356.5 41 39369.0 42 44968.0 43 50567.0 44 55755.5 45 60944.0 46 71495.0 47 82046.0 48 96426.5 49 110807.0 50 106735.0 51 102663.0 52 84567.5 53 66472.0 54 57415.5 55 48359.0 56 42697.0 57 37035.0 58 34739.5 59 32444.0 60 30040.5 61 27637.0 62 22986.5 63 18336.0 64 15266.5 65 12197.0 66 10095.5 67 7994.0 68 6223.5 69 4453.0 70 3812.0 71 3171.0 72 2421.0 73 1671.0 74 1418.5 75 826.0 76 486.0 77 417.5 78 349.0 79 252.5 80 156.0 81 88.5 82 21.0 83 38.5 84 56.0 85 31.5 86 7.0 87 5.0 88 3.0 89 1.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 853058.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.109875367772798 #Duplication Level Percentage of deduplicated Percentage of total 1 65.20815809448169 18.32993196997905 2 13.732267280448603 7.720246435407089 3 5.965937031406841 5.031052392144803 4 3.2729680019635805 3.680108904716183 5 1.9546527474687145 2.747252255931012 6 1.3063255337487856 2.203238876605058 7 0.9045915133934816 1.779956829016502 8 0.6744758832107735 1.5167546412498658 9 0.536677582524539 1.357734596169815 >10 5.917194354448456 39.666045717826215 >50 0.43193662206169475 7.550232527309079 >100 0.08638732330132087 4.223173992712717 >500 0.004635417347875753 0.7884395292128308 >1k 0.002949811039557297 1.9458678104536016 >5k 8.428031541592279E-4 1.4599635212662472 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGCT 6258 0.7335960743583672 No Hit CCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGC 6067 0.7112060375730607 No Hit TCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGC 4770 0.5591647930152464 No Hit GCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGC 4746 0.5563513852516476 No Hit TCCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTG 1704 0.19975195121550937 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1629 0.19096005195426338 No Hit CGCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTG 1235 0.14477327450185098 No Hit GCCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTG 1224 0.14348379594353491 No Hit TGCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTG 1119 0.13117513697779049 No Hit TTCCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCT 925 0.10843342422203414 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.5167597044984047E-4 0.0 0.0 0.7629024052291872 0.0 2 3.5167597044984047E-4 0.0 0.0 2.716462421078051 0.0 3 3.5167597044984047E-4 0.0 0.0 3.740425621704503 0.0 4 3.5167597044984047E-4 0.0 0.0 4.772360144327818 0.0 5 3.5167597044984047E-4 0.0 0.0 6.407887857566543 0.0 6 3.5167597044984047E-4 0.0 0.0 7.398324615676777 0.0 7 3.5167597044984047E-4 0.0 0.0 8.305765844760849 0.0 8 3.5167597044984047E-4 0.0 0.0 9.754436392367225 0.0 9 3.5167597044984047E-4 0.0 0.0 10.438680605539131 0.0 10 3.5167597044984047E-4 0.0 0.0 11.865078341683684 0.0 11 3.5167597044984047E-4 0.0 0.0 14.309695237604009 0.0 12 4.689012939331206E-4 0.0 0.0 16.707890905424954 0.0 13 4.689012939331206E-4 0.0 0.0 17.44687934466355 0.0 14 4.689012939331206E-4 0.0 0.0 17.69844488885867 0.0 15 4.689012939331206E-4 0.0 0.0 18.102989480199472 0.0 16 4.689012939331206E-4 0.0 0.0 19.05497633220719 0.0 17 4.689012939331206E-4 0.0 0.0 20.355239620283733 0.0 18 4.689012939331206E-4 0.0 0.0 21.868501321129397 0.0 19 4.689012939331206E-4 0.0 0.0 22.857296924710862 0.0 20 4.689012939331206E-4 0.0 0.0 23.949954164898518 0.0 21 4.689012939331206E-4 0.0 0.0 25.398038585887477 0.0 22 4.689012939331206E-4 0.0 0.0 26.87273315530714 0.0 23 4.689012939331206E-4 0.0 0.0 28.23395361159499 0.0 24 4.689012939331206E-4 0.0 0.0 29.24173971758075 0.0 25 4.689012939331206E-4 0.0 0.0 30.121398544999284 0.0 26 4.689012939331206E-4 0.0 0.0 30.920406349861324 0.0 27 4.689012939331206E-4 0.0 0.0 31.651306241779576 0.0 28 4.689012939331206E-4 0.0 0.0 32.438005387675865 0.0 29 4.689012939331206E-4 0.0 0.0 33.30570723209911 0.0 30 4.689012939331206E-4 0.0 0.0 34.303529185588786 0.0 31 5.861266174164007E-4 0.0 0.0 35.21601110358264 0.0 32 5.861266174164007E-4 0.0 0.0 36.10434460493894 0.0 33 5.861266174164007E-4 0.0 0.0 36.90440743771232 0.0 34 5.861266174164007E-4 0.0 0.0 37.664965336471845 0.0 35 5.861266174164007E-4 0.0 0.0 38.474523420447376 0.0 36 7.033519408996809E-4 0.0 0.0 39.293459530301575 0.0 37 7.033519408996809E-4 0.0 0.0 40.11755355438903 0.0 38 7.033519408996809E-4 0.0 0.0 40.893585195848345 0.0 39 7.033519408996809E-4 0.0 0.0 41.6630522191926 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGTA 20 7.032262E-4 45.000004 24 TCGTTAG 40 6.8121153E-9 45.000004 1 ACACGTC 20 7.032262E-4 45.000004 37 ACGTTGA 20 7.032262E-4 45.000004 12 TTACTCG 40 6.8121153E-9 45.000004 1 TGTTCGA 20 7.032262E-4 45.000004 31 TACTCCG 20 7.032262E-4 45.000004 20 ACGTCGG 20 7.032262E-4 45.000004 39 CCGACAC 20 7.032262E-4 45.000004 11 TTACGTA 20 7.032262E-4 45.000004 19 AACCTCG 20 7.032262E-4 45.000004 43 CGTCGGC 20 7.032262E-4 45.000004 40 TCCCCGT 20 7.032262E-4 45.000004 19 CACGTCG 20 7.032262E-4 45.000004 38 TGTACCG 20 7.032262E-4 45.000004 1 TGTCGCG 20 7.032262E-4 45.000004 1 CCGTTTA 20 7.032262E-4 45.000004 23 TACCGTT 20 7.032262E-4 45.000004 21 TTGATCG 25 3.8899576E-5 45.0 13 CGGCGAA 50 2.1827873E-11 45.0 13 >>END_MODULE