SRR2933957.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933957.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2175099
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5596	0.2572756458441662	No Hit
CCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGC	5195	0.2388397033882136	No Hit
GCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGC	4978	0.22886314599933152	No Hit
CTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGCT	4903	0.22541502708612343	No Hit
TCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGC	4299	0.19764617610508764	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	3045	40.714283	1
CGTTTGG	1275	38.999996	2
TGGGCGA	2505	38.622753	6
TTCGTTG	750	38.4	1
TACGGGA	510	38.382355	4
CCATACG	170	38.382355	2
TTTTGCG	1845	37.804874	1
TTCTTCG	645	37.67442	1
TCGTTTG	685	37.445255	1
CGAATAG	115	37.173912	26
GGGCGAT	3755	37.090546	7
TTTGGGA	13320	36.976353	4
CGGGTAT	305	36.885246	6
TTTGGGC	5660	36.572437	4
CTACGGG	335	36.268654	3
TTGGGAT	6805	35.97355	5
TTGGGAG	6950	35.870502	5
TGCGGGA	3180	35.801888	4
TTGGGAC	5370	35.782124	5
TTGGGAA	5595	35.670242	5