##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933957.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2175099 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.47285939628495 34.0 31.0 34.0 31.0 34.0 2 32.69809741993353 34.0 31.0 34.0 31.0 34.0 3 32.75167705010209 34.0 31.0 34.0 31.0 34.0 4 36.112659239878276 37.0 35.0 37.0 35.0 37.0 5 36.14348496321317 37.0 35.0 37.0 35.0 37.0 6 35.77486725891557 37.0 35.0 37.0 35.0 37.0 7 36.08501406142893 37.0 35.0 37.0 35.0 37.0 8 36.10541037442434 37.0 37.0 37.0 35.0 37.0 9 37.96125325789769 39.0 38.0 39.0 35.0 39.0 10 37.62884218143634 39.0 37.0 39.0 35.0 39.0 11 37.57166179562402 39.0 37.0 39.0 35.0 39.0 12 37.390186377723495 39.0 37.0 39.0 35.0 39.0 13 37.32724763332612 39.0 37.0 39.0 35.0 39.0 14 38.49187508246751 40.0 38.0 41.0 34.0 41.0 15 38.58613424032653 40.0 38.0 41.0 34.0 41.0 16 38.67418034765314 40.0 38.0 41.0 35.0 41.0 17 38.66681884364804 40.0 38.0 41.0 35.0 41.0 18 38.60627171452886 40.0 38.0 41.0 35.0 41.0 19 38.61171974241172 40.0 38.0 41.0 35.0 41.0 20 38.54283506176041 40.0 38.0 41.0 34.0 41.0 21 38.477182417903734 40.0 38.0 41.0 34.0 41.0 22 38.495716286936826 40.0 38.0 41.0 34.0 41.0 23 38.45116383208305 40.0 38.0 41.0 34.0 41.0 24 38.41623162899712 40.0 37.0 41.0 34.0 41.0 25 38.329010771463736 40.0 37.0 41.0 34.0 41.0 26 38.28098307249463 40.0 37.0 41.0 34.0 41.0 27 38.27675567870704 40.0 37.0 41.0 34.0 41.0 28 38.200564204204035 40.0 37.0 41.0 34.0 41.0 29 38.168018559155236 40.0 37.0 41.0 34.0 41.0 30 38.07110940697412 40.0 37.0 41.0 34.0 41.0 31 38.00152820630233 40.0 37.0 41.0 34.0 41.0 32 37.91266098692519 40.0 37.0 41.0 34.0 41.0 33 37.82481073275285 40.0 37.0 41.0 33.0 41.0 34 37.76073778710762 40.0 37.0 41.0 33.0 41.0 35 37.71260158733005 40.0 37.0 41.0 33.0 41.0 36 37.633135319357876 40.0 36.0 41.0 33.0 41.0 37 37.574975667774204 40.0 36.0 41.0 33.0 41.0 38 37.520369877417075 40.0 36.0 41.0 33.0 41.0 39 37.43742376783769 40.0 36.0 41.0 33.0 41.0 40 37.33244279915535 40.0 36.0 41.0 32.0 41.0 41 37.24870913921619 40.0 35.0 41.0 32.0 41.0 42 37.2571551915568 40.0 35.0 41.0 32.0 41.0 43 37.181600009930584 40.0 35.0 41.0 32.0 41.0 44 37.08754038321934 39.0 35.0 41.0 32.0 41.0 45 37.07364676274505 39.0 35.0 41.0 32.0 41.0 46 37.008416628392546 39.0 35.0 41.0 32.0 41.0 47 36.94716792201183 39.0 35.0 41.0 32.0 41.0 48 36.877556377893605 39.0 35.0 41.0 32.0 41.0 49 36.83758900169602 39.0 35.0 41.0 31.0 41.0 50 36.75277631041162 39.0 35.0 41.0 31.0 41.0 51 35.89731915650736 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 12.0 9 27.0 10 34.0 11 54.0 12 32.0 13 39.0 14 37.0 15 62.0 16 95.0 17 176.0 18 301.0 19 569.0 20 958.0 21 1651.0 22 2415.0 23 3731.0 24 5326.0 25 8374.0 26 11869.0 27 14326.0 28 16930.0 29 19889.0 30 24533.0 31 32177.0 32 43217.0 33 63482.0 34 121013.0 35 139935.0 36 146315.0 37 238221.0 38 463495.0 39 815295.0 40 507.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.480678350732543 4.60608919410105 55.735945812121656 16.177286643044752 2 19.64811716616117 4.317918402794539 54.11565174734575 21.918312683698534 3 20.786732006221325 4.582366135978178 52.00112730501002 22.629774552790472 4 19.4033007233234 4.946349568456424 51.00232219315075 24.64802751506943 5 18.682919719975967 5.639053670660508 50.465565015661355 25.212461593702173 6 21.955782242555397 6.66397253642248 52.805550460002046 18.574694761020073 7 84.9202725944888 2.227622742688953 8.407617308453547 4.4444873543686985 8 86.9531915558786 2.628707934673318 6.503979818849624 3.914120690598451 9 81.20540720215493 5.152179280115526 8.666318176781838 4.976095340947699 10 37.51626937440549 31.214257374032172 15.90378185084909 15.365691400713255 11 28.791976824962912 25.165291326969484 25.516309832334066 20.526422015733537 12 26.284918525547575 22.659612275119432 29.32441236008108 21.731056839251913 13 25.394752146913774 21.903738634425377 31.589320761951523 21.112188456709326 14 21.06354699257367 24.040928711750592 32.451994139117346 22.443530156558392 15 19.69993089969698 24.86015579060999 33.51718703378559 21.922726275907443 16 23.784618539202125 25.003597537399447 30.14727145752906 21.06451246586937 17 23.928152235829266 24.731380042931377 28.92489031533737 22.415577405901985 18 23.48725276412706 24.11379895811639 30.501692106888008 21.897256170868545 19 24.361235971328203 25.207082528197567 29.178396017836427 21.2532854826378 20 24.457691351060344 27.740484456109815 28.773173083156216 19.02865110967363 21 25.1346720310202 25.241425792573118 30.025621822271077 19.598280354135607 22 23.842179137593277 23.400865891621482 30.55428741404414 22.202667556741098 23 22.542422206989198 24.14331485601345 30.171959988947627 23.14230294804972 24 22.39594611555612 24.87408619101935 29.409465959940214 23.320501733484313 25 22.403669901921706 26.36776532930225 27.383121411944927 23.845443356831115 26 20.662737650102365 26.47907060782061 27.686142102037653 25.172049640039372 27 20.75197496757619 25.06681305080826 30.176971255101492 24.004240726514055 28 19.719102440854417 25.87477627455118 29.32606745715942 25.080053827434984 29 20.780801241690607 25.726507161283234 29.103548849960394 24.389142747065765 30 22.487114379621342 25.36551209852977 29.017437826967875 23.129935694881016 31 22.501550504137974 26.56660685329725 27.630788299750954 23.30105434281382 32 22.65147471448426 26.904016782684376 26.756988992225182 23.687519510606183 33 22.390934849402257 26.31015875599226 27.09918031317195 24.199726081433536 34 20.794042018317327 26.027688854622248 29.193475791216862 23.984793335843563 35 20.005756059839115 26.871926289332116 27.442980756278217 25.67933689455055 36 21.985252165533613 26.621500906395525 26.588169090234516 24.805077837836347 37 21.470930748439496 27.63644321476861 27.451807940696032 23.440818096095857 38 21.33958040530569 27.616260225396637 27.60297347385108 23.441185895446598 39 20.574006056735808 27.24749540135874 28.135454983888092 24.04304355801736 40 21.755791345589326 26.556538346070685 28.312596346189302 23.37507396215069 41 19.934127136282072 25.62687951215094 28.078721934036103 26.36027141753088 42 20.399761114321695 24.38974042101072 29.678787034521186 25.531711430146398 43 20.674553204244955 23.86728144328143 30.21421093936414 25.24395441310947 44 21.3019729216923 24.42380783587322 28.446153485427562 25.828065757006925 45 21.160232246900026 24.1076842939103 27.419763422262616 27.31232003692706 46 21.16630093618727 24.635752211738406 28.447992482181274 25.749954369893047 47 19.225423762320702 25.49759804036506 30.143501514183953 25.133476683130283 48 19.593774812089013 25.82038794556018 29.46325661498626 25.12258062736455 49 21.72420657634434 24.537871609522142 29.63607633491625 24.101845479217268 50 20.413829439487582 25.008838678147523 28.62904171258412 25.94829016978078 51 19.2200446968161 25.001206841619624 27.746828994910118 28.03191946665416 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 252.0 1 1213.0 2 2174.0 3 6065.5 4 9957.0 5 6697.5 6 3438.0 7 3424.0 8 3410.0 9 3467.5 10 3525.0 11 3532.5 12 3540.0 13 3506.5 14 3473.0 15 3493.5 16 3514.0 17 3453.5 18 3393.0 19 3886.5 20 4380.0 21 5388.5 22 6397.0 23 7245.5 24 8094.0 25 10461.0 26 15631.0 27 18434.0 28 22691.5 29 26949.0 30 30787.5 31 34626.0 32 41849.0 33 49072.0 34 54808.5 35 60545.0 36 66103.5 37 71662.0 38 80156.5 39 88651.0 40 95956.0 41 103261.0 42 111305.5 43 119350.0 44 133124.5 45 146899.0 46 166309.5 47 185720.0 48 206412.5 49 227105.0 50 225165.5 51 223226.0 52 199242.0 53 175258.0 54 156435.5 55 137613.0 56 124112.5 57 110612.0 58 102629.5 59 94647.0 60 83504.0 61 72361.0 62 64703.5 63 57046.0 64 48278.5 65 39511.0 66 32139.0 67 24767.0 68 20387.0 69 16007.0 70 12989.5 71 9972.0 72 8219.0 73 6466.0 74 5066.5 75 2664.0 76 1661.0 77 1262.5 78 864.0 79 657.5 80 451.0 81 323.5 82 196.0 83 128.5 84 61.0 85 37.0 86 13.0 87 16.5 88 20.0 89 15.5 90 11.0 91 8.5 92 6.0 93 3.5 94 1.0 95 5.0 96 9.0 97 6.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2175099.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.86472677179097 #Duplication Level Percentage of deduplicated Percentage of total 1 70.17110305210714 18.85127510770046 2 11.682782497345386 6.277095194508911 3 4.366865618137534 3.5194395504117875 4 2.1543249504955795 2.3150140469086344 5 1.2794666133757164 1.718626049098367 6 0.8650576132275899 1.39437218527301 7 0.6065024334401765 1.1405465512557678 8 0.5002425985478665 1.075110458367932 9 0.4356564105082802 1.053341139121574 >10 7.382987762674055 49.80418057335271 >50 0.4917008644285006 7.861165097456799 >100 0.057917978699122075 2.7685337413059736 >500 0.003130610523734456 0.5493327378196796 >1k 0.0019131508756155006 1.1677701043061368 >5k 3.4784561374827285E-4 0.5041974631123723 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5596 0.2572756458441662 No Hit CCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGC 5195 0.2388397033882136 No Hit GCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGC 4978 0.22886314599933152 No Hit CTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGCT 4903 0.22541502708612343 No Hit TCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGC 4299 0.19764617610508764 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3792475652832354E-4 0.0 0.0 0.23893165322589915 0.0 2 1.3792475652832354E-4 0.0 0.0 0.9641400230518243 0.0 3 1.3792475652832354E-4 0.0 0.0 1.4475662946835983 0.0 4 1.3792475652832354E-4 0.0 0.0 1.974071065271052 0.0 5 1.3792475652832354E-4 0.0 0.0 2.873294502916879 0.0 6 1.3792475652832354E-4 0.0 0.0 3.5989626219312316 0.0 7 1.3792475652832354E-4 0.0 0.0 4.206888973789239 0.0 8 1.3792475652832354E-4 0.0 0.0 5.133283588471145 0.0 9 1.3792475652832354E-4 0.0 0.0 5.623330248416279 0.0 10 1.3792475652832354E-4 0.0 0.0 6.471659450903155 0.0 11 1.3792475652832354E-4 0.0 0.0 7.993153415085934 0.0 12 1.8389967537109806E-4 0.0 0.0 9.373872177772139 0.0 13 1.8389967537109806E-4 0.0 0.0 9.83771313397689 0.0 14 1.8389967537109806E-4 0.0 0.0 10.025336777774253 0.0 15 1.8389967537109806E-4 0.0 0.0 10.274566812820934 0.0 16 2.2987459421387255E-4 0.0 0.0 10.793577671637015 0.0 17 2.2987459421387255E-4 0.0 0.0 11.512947226769908 0.0 18 2.758495130566471E-4 0.0 0.0 12.250660774521068 0.0 19 2.758495130566471E-4 0.0 0.0 12.836335265659173 0.0 20 3.677993507421961E-4 0.0 0.0 13.494236354299275 0.0 21 4.137742695849706E-4 0.0 0.0 14.395436713455341 0.0 22 4.137742695849706E-4 0.0 0.0 15.391115530833309 0.0 23 4.137742695849706E-4 0.0 0.0 16.287028774322454 0.0 24 4.137742695849706E-4 0.0 0.0 16.982629296413634 0.0 25 4.137742695849706E-4 0.0 0.0 17.610508763049406 0.0 26 4.137742695849706E-4 0.0 0.0 18.167908679099206 0.0 27 4.137742695849706E-4 0.0 0.0 18.77762805279208 0.0 28 4.137742695849706E-4 0.0 0.0 19.356452281022612 0.0 29 4.137742695849706E-4 0.0 0.0 19.987871816409275 0.0 30 4.137742695849706E-4 0.0 0.0 20.695287892643048 0.0 31 4.597491884277451E-4 0.0 0.0 21.333235866505387 0.0 32 4.597491884277451E-4 0.0 0.0 21.953437521694415 0.0 33 4.597491884277451E-4 0.0 0.0 22.55437568588832 0.0 34 4.597491884277451E-4 0.0 0.0 23.1933351079652 0.0 35 4.597491884277451E-4 0.0 0.0 23.842041212836747 0.0 36 4.597491884277451E-4 0.0 0.0 24.435071690989698 0.0 37 4.597491884277451E-4 0.0 0.0 25.048790882621894 0.0 38 4.597491884277451E-4 0.0 0.0 25.73275975024585 0.0 39 4.597491884277451E-4 0.0 0.0 26.718737859747993 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 3045 0.0 40.714283 1 CGTTTGG 1275 0.0 38.999996 2 TGGGCGA 2505 0.0 38.622753 6 TTCGTTG 750 0.0 38.4 1 TACGGGA 510 0.0 38.382355 4 CCATACG 170 0.0 38.382355 2 TTTTGCG 1845 0.0 37.804874 1 TTCTTCG 645 0.0 37.67442 1 TCGTTTG 685 0.0 37.445255 1 CGAATAG 115 0.0 37.173912 26 GGGCGAT 3755 0.0 37.090546 7 TTTGGGA 13320 0.0 36.976353 4 CGGGTAT 305 0.0 36.885246 6 TTTGGGC 5660 0.0 36.572437 4 CTACGGG 335 0.0 36.268654 3 TTGGGAT 6805 0.0 35.97355 5 TTGGGAG 6950 0.0 35.870502 5 TGCGGGA 3180 0.0 35.801888 4 TTGGGAC 5370 0.0 35.782124 5 TTGGGAA 5595 0.0 35.670242 5 >>END_MODULE