##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933956.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 540161 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.361190459881406 33.0 31.0 34.0 31.0 34.0 2 32.59116818874373 34.0 31.0 34.0 31.0 34.0 3 32.65440859299357 34.0 31.0 34.0 31.0 34.0 4 36.034624861846744 37.0 35.0 37.0 35.0 37.0 5 36.07694742863702 37.0 35.0 37.0 35.0 37.0 6 35.716530812109724 37.0 35.0 37.0 35.0 37.0 7 36.04029354211059 37.0 35.0 37.0 35.0 37.0 8 36.04346296752264 37.0 36.0 37.0 35.0 37.0 9 37.89937814836688 39.0 38.0 39.0 35.0 39.0 10 37.5816913846057 39.0 37.0 39.0 35.0 39.0 11 37.53003641506884 39.0 37.0 39.0 35.0 39.0 12 37.3170961990962 39.0 37.0 39.0 35.0 39.0 13 37.233813622234855 39.0 37.0 39.0 34.0 39.0 14 38.33731794779705 40.0 38.0 41.0 34.0 41.0 15 38.43402615146225 40.0 38.0 41.0 34.0 41.0 16 38.539398438613674 40.0 38.0 41.0 34.0 41.0 17 38.53159335827652 40.0 38.0 41.0 34.0 41.0 18 38.52425665681158 40.0 38.0 41.0 35.0 41.0 19 38.54933251382458 40.0 38.0 41.0 35.0 41.0 20 38.49847175194063 40.0 38.0 41.0 34.0 41.0 21 38.394389820812684 40.0 37.0 41.0 34.0 41.0 22 38.42129291081733 40.0 37.0 41.0 34.0 41.0 23 38.38878038214532 40.0 37.0 41.0 34.0 41.0 24 38.36736824761506 40.0 37.0 41.0 34.0 41.0 25 38.264930270789634 40.0 37.0 41.0 34.0 41.0 26 38.17880594859681 40.0 37.0 41.0 34.0 41.0 27 38.150903156651445 40.0 37.0 41.0 34.0 41.0 28 38.04133212134901 40.0 37.0 41.0 34.0 41.0 29 38.01596931285302 40.0 37.0 41.0 34.0 41.0 30 37.951297853788034 40.0 36.0 41.0 34.0 41.0 31 37.834275336427474 40.0 36.0 41.0 33.0 41.0 32 37.73937400145512 40.0 36.0 41.0 33.0 41.0 33 37.71865610438369 40.0 36.0 41.0 33.0 41.0 34 37.72002051240278 40.0 36.0 41.0 33.0 41.0 35 37.705535942061715 40.0 36.0 41.0 33.0 41.0 36 37.609418303061496 40.0 36.0 41.0 33.0 41.0 37 37.475358272811256 40.0 36.0 41.0 33.0 41.0 38 37.37709312593838 40.0 35.0 41.0 33.0 41.0 39 37.380732781522546 40.0 35.0 41.0 33.0 41.0 40 37.31223283428459 39.0 35.0 41.0 33.0 41.0 41 37.23532058034549 39.0 35.0 41.0 32.0 41.0 42 37.226121471191 39.0 35.0 41.0 32.0 41.0 43 37.11086694522559 39.0 35.0 41.0 32.0 41.0 44 36.97298027810227 39.0 35.0 41.0 32.0 41.0 45 36.97457980120742 39.0 35.0 41.0 32.0 41.0 46 36.877532809662306 39.0 35.0 41.0 32.0 41.0 47 36.78675987344514 39.0 35.0 41.0 31.0 41.0 48 36.739920134922734 39.0 35.0 41.0 31.0 41.0 49 36.74035889299672 39.0 35.0 41.0 31.0 41.0 50 36.67208110174559 39.0 35.0 40.0 31.0 41.0 51 35.65360327754133 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 13.0 10 9.0 11 9.0 12 10.0 13 12.0 14 9.0 15 13.0 16 15.0 17 37.0 18 52.0 19 125.0 20 226.0 21 371.0 22 583.0 23 886.0 24 1274.0 25 1896.0 26 2618.0 27 3282.0 28 4075.0 29 4975.0 30 6366.0 31 8370.0 32 11083.0 33 16420.0 34 31346.0 35 41677.0 36 38463.0 37 60747.0 38 120962.0 39 184125.0 40 109.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.71311516381227 4.905944709077479 54.95361568125059 16.42732444585966 2 19.931464878064133 4.587335997970976 52.924405871582735 22.55679325238216 3 21.670020604967778 4.507359842713561 51.712544963446085 22.11007458887258 4 20.830456104753953 4.634914405149576 49.74109571035302 24.793533779743445 5 18.408770718359897 5.5611197402256 49.637052656522776 26.393056884891724 6 21.75814247974215 6.3775429918117 53.06232771340397 18.80198681504218 7 81.86947965513986 2.314680252739461 10.036452094838392 5.779387997282292 8 82.35007710664043 2.836191431813848 8.539861263586227 6.273870197959496 9 76.22116369008499 5.452818696647851 11.481761919131518 6.8442556941356365 10 35.62067605769391 30.309296672658707 18.983229074294517 15.086798195352866 11 29.188889979098825 25.893205914532892 25.928010352468988 18.989893753899302 12 27.02897839718158 22.42442531023158 30.588657826092593 19.957938466494248 13 24.371807664751806 24.76817097124746 30.7611989758609 20.098822388139833 14 18.798284215261745 27.071373164667573 31.338619411619867 22.791723208450815 15 16.798695203837376 25.961889140459977 36.00870851468358 21.230707141019067 16 19.184280242372182 25.589777862526176 32.4331079067167 22.792833988384945 17 20.291357576722497 25.083262212562552 28.837142999957422 25.78823721075753 18 20.957085017244857 24.358478305542235 31.463026764242514 23.221409912970394 19 22.82856407626615 25.336520037544364 28.98191465137246 22.85300123481703 20 25.153981868368874 26.268834662258104 28.91063960559907 19.66654386377395 21 23.42338673099317 26.332889638459644 30.261533135491085 19.982190495056106 22 21.10704030835251 24.621733149931224 29.348286899646585 24.92293964206968 23 20.457419176875042 25.253952062440643 29.605987844364922 24.682640916319393 24 22.300758477565022 23.746623691825214 29.453810993389006 24.498806837220755 25 21.6846458741005 25.686971106762613 26.783310901749662 25.845072117387225 26 21.793872567623357 27.365174457245157 27.076927064338225 23.76402591079326 27 22.453120458529956 26.21773878528809 29.65560268142276 21.67353807475919 28 19.03636138114377 25.46462998994744 32.533818620744555 22.96519000816423 29 21.31882901579344 25.479440389069186 30.244871436479126 22.95685915865825 30 23.516877375449173 26.497285068710998 28.17363711930332 21.812200436536514 31 22.933347650052486 29.235912996310358 26.332149118503555 21.498590235133598 32 23.506510096063952 30.03067603918091 25.109735800992667 21.35307806376247 33 23.072195141818828 27.470513420998554 25.649945108958256 23.807346328224362 34 21.283284057901255 25.71770268494023 28.85898833866199 24.140024918496522 35 21.849596694318915 25.562563754139973 26.21181462563939 26.37602492590172 36 25.05123472446178 25.888762794796367 26.426935672882713 22.63306680785914 37 22.79635145817636 27.141907690484874 28.980989001427353 21.080751849911415 38 19.360523991920928 30.052891637863528 27.953517562356407 22.63306680785914 39 21.10722543834153 27.327222809495687 28.272311403451933 23.293240348710846 40 24.65116881818569 25.46462998994744 27.82226040013996 22.06194079172691 41 21.54505786237807 25.589407602548132 26.07296713387305 26.79256740120075 42 22.154505786237806 24.429938481304646 27.053970945699525 26.361584786758023 43 22.682866774906 23.99895586686192 28.257871264308232 25.060306093923852 44 21.67205703484702 24.15724200747555 28.364506137984787 25.806194819692646 45 22.540316683359222 24.045978884073453 26.27772090173115 27.135983530836178 46 23.116256079206014 25.235809323516506 28.12698436206983 23.520950235207653 47 20.315239345306306 24.798162029468994 31.10109763570491 23.785500989519793 48 19.383480110559628 25.1006644315306 30.276528664601848 25.23932679330792 49 21.606335888744283 23.112183219447534 31.413226797195655 23.86825409461253 50 21.870886643056423 22.934643559975637 28.66071412041965 26.53375567654829 51 19.438093457321056 23.711634123900097 26.942892952286446 29.907379466492394 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 73.0 1 259.0 2 445.0 3 990.5 4 1536.0 5 1078.0 6 620.0 7 661.0 8 702.0 9 767.5 10 833.0 11 898.5 12 964.0 13 954.5 14 945.0 15 888.5 16 832.0 17 865.5 18 899.0 19 1076.0 20 1253.0 21 1173.5 22 1094.0 23 1661.5 24 2229.0 25 2381.5 26 3474.0 27 4414.0 28 5114.0 29 5814.0 30 6503.0 31 7192.0 32 8873.5 33 10555.0 34 11807.0 35 13059.0 36 14464.0 37 15869.0 38 17403.5 39 18938.0 40 22434.5 41 25931.0 42 29091.5 43 32252.0 44 35774.0 45 39296.0 46 47168.5 47 55041.0 48 63649.5 49 72258.0 50 69044.5 51 65831.0 52 53849.0 53 41867.0 54 35549.0 55 29231.0 56 26360.5 57 23490.0 58 21267.0 59 19044.0 60 17520.0 61 15996.0 62 13910.0 63 11824.0 64 9382.5 65 6941.0 66 5447.5 67 3954.0 68 3453.0 69 2952.0 70 2324.5 71 1697.0 72 1276.5 73 856.0 74 633.0 75 293.0 76 176.0 77 174.5 78 173.0 79 127.0 80 81.0 81 68.0 82 55.0 83 29.0 84 3.0 85 2.5 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 540161.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.18440449307781 #Duplication Level Percentage of deduplicated Percentage of total 1 66.89065634064731 19.52163971452911 2 13.425819001465708 7.8364906477925045 3 5.749094518691476 5.033516997072855 4 2.867685763715459 3.3476680514925086 5 1.7891851393807827 2.610815141034627 6 1.123013388795671 1.966468619385295 7 0.7766877172842707 1.5867017954220588 8 0.6335244894779412 1.479122796575588 9 0.4682076763352105 1.2297925991637755 >10 5.859838863711678 41.70199160152486 >50 0.33097710917594675 5.898018707388522 >100 0.0776128492447472 3.9646471642422796 >500 0.004489999543084549 0.9322415070554112 >1k 0.003207142530774678 2.8908846573206257 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 4041 0.7481102856370601 TruSeq Adapter, Index 14 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGCT 4000 0.7405199560871666 TruSeq Adapter, Index 15 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 3141 0.5814932955174477 TruSeq Adapter, Index 14 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 3025 0.5600182167909198 TruSeq Adapter, Index 14 (95% over 21bp) TCCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTG 1236 0.22882066643093446 TruSeq Adapter, Index 15 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 856 0.15847127060265365 No Hit GCCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTG 852 0.15773075064656647 No Hit CGCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTG 841 0.15569432076732678 TruSeq Adapter, Index 15 (95% over 21bp) TGCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTG 775 0.14347574149188852 TruSeq Adapter, Index 15 (95% over 21bp) TTCCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCT 623 0.1153359831605762 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8512998902179165E-4 0.0 0.0 0.7805080337158736 0.0 2 1.8512998902179165E-4 0.0 0.0 2.8467438411880903 0.0 3 1.8512998902179165E-4 0.0 0.0 4.0319460309056 0.0 4 1.8512998902179165E-4 0.0 0.0 5.153648634388636 0.0 5 1.8512998902179165E-4 0.0 0.0 6.963479407065671 0.0 6 1.8512998902179165E-4 0.0 0.0 8.001503255510857 0.0 7 1.8512998902179165E-4 0.0 0.0 8.921969560927206 0.0 8 1.8512998902179165E-4 0.0 0.0 10.282674980237374 0.0 9 1.8512998902179165E-4 0.0 0.0 10.888420304316677 0.0 10 1.8512998902179165E-4 0.0 0.0 12.168779308391388 0.0 11 1.8512998902179165E-4 0.0 0.0 14.540294467760537 0.0 12 1.8512998902179165E-4 0.0 0.0 16.644667052971243 0.0 13 1.8512998902179165E-4 0.0 0.0 17.371487389870797 0.0 14 1.8512998902179165E-4 0.0 0.0 17.66436303250327 0.0 15 1.8512998902179165E-4 0.0 0.0 18.069797708460996 0.0 16 1.8512998902179165E-4 0.0 0.0 19.06505652944215 0.0 17 1.8512998902179165E-4 0.0 0.0 20.38262666131024 0.0 18 1.8512998902179165E-4 0.0 0.0 21.91920557019111 0.0 19 1.8512998902179165E-4 0.0 0.0 22.843744735365938 0.0 20 1.8512998902179165E-4 0.0 0.0 23.864366364843075 0.0 21 1.8512998902179165E-4 0.0 0.0 25.24154835317618 0.0 22 1.8512998902179165E-4 0.0 0.0 26.577816613935475 0.0 23 1.8512998902179165E-4 0.0 0.0 27.859286397944317 0.0 24 1.8512998902179165E-4 0.0 0.0 28.77308802375588 0.0 25 3.702599780435833E-4 0.0 0.0 29.605247324408833 0.0 26 3.702599780435833E-4 0.0 0.0 30.324292201769474 0.0 27 3.702599780435833E-4 0.0 0.0 31.05648130835066 0.0 28 3.702599780435833E-4 0.0 0.0 31.825696412736203 0.0 29 3.702599780435833E-4 0.0 0.0 32.675257932357205 0.0 30 3.702599780435833E-4 0.0 0.0 33.5944283278504 0.0 31 3.702599780435833E-4 0.0 0.0 34.4626879763626 0.0 32 3.702599780435833E-4 0.0 0.0 35.24023393025413 0.0 33 3.702599780435833E-4 0.0 0.0 35.965202967263465 0.0 34 3.702599780435833E-4 0.0 0.0 36.72571696216498 0.0 35 3.702599780435833E-4 0.0 0.0 37.52603390470619 0.0 36 3.702599780435833E-4 0.0 0.0 38.29062075936619 0.0 37 3.702599780435833E-4 0.0 0.0 39.01910726616694 0.0 38 3.702599780435833E-4 0.0 0.0 39.777955091167264 0.0 39 3.702599780435833E-4 0.0 0.0 40.73692843430015 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGGT 30 2.1633568E-6 45.000004 4 TCGATCA 30 2.1633568E-6 45.000004 17 CCTCGCG 30 2.1633568E-6 45.000004 1 GCCGATG 30 2.1633568E-6 45.000004 9 GCCGATC 20 7.029961E-4 45.000004 9 TCGTGCG 20 7.029961E-4 45.000004 1 TCTACGG 20 7.029961E-4 45.000004 2 ACGTGTA 20 7.029961E-4 45.000004 28 TCGCTAT 20 7.029961E-4 45.000004 27 TACCTAC 30 2.1633568E-6 45.000004 25 GCGATTA 20 7.029961E-4 45.000004 23 CGGCTAG 30 2.1633568E-6 45.000004 41 CCGCGAG 30 2.1633568E-6 45.000004 11 TTCGCTA 20 7.029961E-4 45.000004 26 TTACACG 20 7.029961E-4 45.000004 34 TACACGC 20 7.029961E-4 45.000004 35 CGCTTCA 20 7.029961E-4 45.000004 27 TCCGCGA 25 3.8880513E-5 45.0 10 ATTACGA 25 3.8880513E-5 45.0 36 TTCCGCG 45 3.8380676E-10 45.0 1 >>END_MODULE