##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933950.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1830589 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.48517717521519 33.0 31.0 34.0 31.0 34.0 2 32.717366923979114 34.0 31.0 34.0 31.0 34.0 3 32.773096527948105 34.0 31.0 34.0 31.0 34.0 4 36.12418516663216 37.0 35.0 37.0 35.0 37.0 5 36.1591629797841 37.0 35.0 37.0 35.0 37.0 6 35.83056218517647 37.0 35.0 37.0 35.0 37.0 7 36.13844888175336 37.0 35.0 37.0 35.0 37.0 8 36.154258001113305 37.0 37.0 37.0 35.0 37.0 9 38.03095178655613 39.0 39.0 39.0 37.0 39.0 10 37.68390392381905 39.0 37.0 39.0 35.0 39.0 11 37.607550903015365 39.0 37.0 39.0 35.0 39.0 12 37.38778065420474 39.0 37.0 39.0 35.0 39.0 13 37.29167715964643 39.0 37.0 39.0 34.0 39.0 14 38.20914252188776 40.0 38.0 41.0 33.0 41.0 15 38.379526480274926 40.0 38.0 41.0 33.0 41.0 16 38.55191307278695 40.0 38.0 41.0 34.0 41.0 17 38.586454414398865 40.0 38.0 41.0 35.0 41.0 18 38.554950892854706 40.0 38.0 41.0 35.0 41.0 19 38.575417529549235 40.0 38.0 41.0 35.0 41.0 20 38.50536084287626 40.0 38.0 41.0 34.0 41.0 21 38.43603015204396 40.0 38.0 41.0 34.0 41.0 22 38.49452225485896 40.0 38.0 41.0 34.0 41.0 23 38.47233376798397 40.0 37.0 41.0 34.0 41.0 24 38.45295912954792 40.0 37.0 41.0 34.0 41.0 25 38.346546931069724 40.0 37.0 41.0 34.0 41.0 26 38.27794551371171 40.0 37.0 41.0 34.0 41.0 27 38.276534492450246 40.0 37.0 41.0 34.0 41.0 28 38.22181549217219 40.0 37.0 41.0 34.0 41.0 29 38.19956254516989 40.0 37.0 41.0 34.0 41.0 30 38.145494155159895 40.0 37.0 41.0 34.0 41.0 31 38.02817508463123 40.0 37.0 41.0 34.0 41.0 32 37.9602253700858 40.0 37.0 41.0 34.0 41.0 33 37.9222146533165 40.0 37.0 41.0 34.0 41.0 34 37.839188370519 40.0 36.0 41.0 33.0 41.0 35 37.77715806224117 40.0 36.0 41.0 33.0 41.0 36 37.68104200342076 40.0 36.0 41.0 33.0 41.0 37 37.598506819389826 40.0 36.0 41.0 33.0 41.0 38 37.57980955856284 40.0 36.0 41.0 33.0 41.0 39 37.56056001647557 40.0 36.0 41.0 33.0 41.0 40 37.41293102930259 40.0 35.0 41.0 33.0 41.0 41 37.26256139417423 40.0 35.0 41.0 32.0 41.0 42 37.277572956026724 40.0 35.0 41.0 32.0 41.0 43 37.19647774568732 39.0 35.0 41.0 32.0 41.0 44 37.11658433433173 39.0 35.0 41.0 32.0 41.0 45 37.176600536767126 39.0 35.0 41.0 32.0 41.0 46 37.149971402646905 39.0 35.0 41.0 32.0 41.0 47 37.07928541032422 39.0 35.0 41.0 32.0 41.0 48 37.01266641501724 39.0 35.0 41.0 32.0 41.0 49 37.01189999502892 39.0 35.0 41.0 32.0 41.0 50 36.93166680232428 39.0 35.0 41.0 32.0 41.0 51 36.024792020491766 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 19.0 10 32.0 11 25.0 12 30.0 13 21.0 14 41.0 15 51.0 16 97.0 17 161.0 18 260.0 19 477.0 20 764.0 21 1222.0 22 1966.0 23 2854.0 24 4185.0 25 6385.0 26 8817.0 27 11068.0 28 13279.0 29 15972.0 30 20474.0 31 26977.0 32 37386.0 33 58592.0 34 114766.0 35 110483.0 36 115074.0 37 190801.0 38 383891.0 39 703958.0 40 453.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.41480747453415 4.4127873596967975 57.97254326339774 15.199861902371314 2 19.117289571826333 3.9812868972773243 55.65421839637407 21.247205134522275 3 20.490126401939484 4.281955152139557 53.76881429965984 21.459104146261122 4 18.78411811717431 4.565852848454787 52.54898833107814 24.101040703292764 5 18.768658612064204 5.388320371202929 51.76394045850816 24.079080558224703 6 20.499030639865094 5.857185856574032 54.87845715231545 18.765326351245417 7 84.7435989181624 1.779099513872311 8.980934551666158 4.496367016299126 8 87.33221930209348 2.1526404889355284 6.396247328045781 4.11889288092521 9 82.2096057607688 4.6884363448048685 8.531188595583169 4.570769298843159 10 37.5297240396397 35.10296412793915 14.874556768340682 12.492755064080468 11 27.203375525582203 25.201069164077794 29.300350870676052 18.295204439663955 12 25.633170525989176 22.267969489601434 32.39749610644443 19.701363877964962 13 25.66916986827737 21.338104839480625 34.072803889895546 18.919921402346457 14 19.606858776055137 23.814193136744514 35.63388614265682 20.945061944543532 15 17.69818348083595 25.15785902788665 36.62329446970347 20.52066302157393 16 23.848280526103892 25.657479641798346 30.20027980065432 20.29396003144343 17 24.79475185309209 24.932630972872666 28.68371873752109 21.58889843651415 18 24.423122830957684 24.17156445275264 31.476098676436926 19.929214039852745 19 23.90940839259932 25.889372218449907 29.935829396986435 20.265389991964337 20 22.352532436281436 30.339032956059498 29.28696720017437 18.021467407484696 21 23.084264135750843 26.144208230247205 33.12278179318241 17.64874584081954 22 21.923107808470387 23.159540453919476 33.80026865670011 21.117083080910025 23 20.350826974268937 24.649498057728962 32.99987053347311 21.999804434528997 24 21.09555995365426 26.693648874761074 30.333788742311903 21.877002429272764 25 22.30959543622299 26.987051708493826 27.74232774260088 22.96102511268231 26 20.1473951826434 27.668089341736458 27.585274466305655 24.599241009314486 27 20.14919788111914 25.907836221019576 32.03378803215796 21.909177865703334 28 18.900911127511417 25.876480192987067 30.033939895847727 25.188668783653785 29 19.954888836325356 27.15442953060463 29.329139419061296 23.561542214008714 30 23.97419628327276 24.920612983034424 30.218798430450526 20.88639230324229 31 22.204438025138355 27.315142831077864 29.561195877392464 20.91922326639131 32 23.966548471557513 27.35736967719133 26.990493223765682 21.68558862748547 33 24.99845678085032 25.101319848420374 27.944666989695666 21.955556381033645 34 20.44702552020142 26.237730042079356 30.811831601741297 22.50341283597793 35 20.326080840647464 29.10429375463307 27.598658136807337 22.970967267912133 36 24.941262074665584 27.55173334921165 27.022941796328944 20.484062779793828 37 23.07809125915211 28.512462382326127 27.515133107431545 20.894313251090225 38 22.734759140364112 26.429580861678946 28.071347528036057 22.764312469920885 39 20.978821570543687 24.77044273728292 29.33356422441083 24.91717146776256 40 22.3278409298865 25.79361069032973 29.98166164005137 21.896886739732402 41 20.401411786042633 27.223860735533755 27.576643364512734 24.79808411391088 42 21.883503069230724 25.79219038243975 29.784839742836866 22.53946680549266 43 22.412349249339965 23.92240967251524 30.167667346411452 23.497573731733336 44 21.987021663519226 23.86434093070591 29.035518076422395 25.113119329352468 45 20.930312593378414 23.21405842600387 28.072877090379105 27.782751890238604 46 21.38874427848086 24.583399113618622 29.942985563662845 24.084871044237673 47 19.454940459054434 26.187309111985268 31.832432075140844 22.525318353819454 48 20.227861087333093 27.063038180607446 29.606864238777792 23.10223649328167 49 23.430054479733027 23.824790818692783 30.320186562904073 22.424968138670124 50 20.90065000936857 24.561111205191335 28.847491162680427 25.69074762275967 51 19.79641525214016 25.278093553495623 27.306730238191097 27.618760956173123 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 262.0 1 831.0 2 1400.0 3 3796.0 4 6192.0 5 4223.5 6 2255.0 7 2248.5 8 2242.0 9 2434.0 10 2626.0 11 2631.0 12 2636.0 13 2722.0 14 2808.0 15 2800.0 16 2792.0 17 3033.5 18 3275.0 19 4033.5 20 4792.0 21 6064.5 22 7337.0 23 8455.5 24 9574.0 25 12255.0 26 18098.0 27 21260.0 28 27187.5 29 33115.0 30 36954.0 31 40793.0 32 47731.5 33 54670.0 34 57670.5 35 60671.0 36 65113.5 37 69556.0 38 77139.0 39 84722.0 40 91376.5 41 98031.0 42 102906.0 43 107781.0 44 116879.0 45 125977.0 46 140834.5 47 155692.0 48 178283.0 49 200874.0 50 193492.5 51 186111.0 52 159789.5 53 133468.0 54 117429.5 55 101391.0 56 92399.5 57 83408.0 58 75120.0 59 66832.0 60 55995.0 61 45158.0 62 38557.5 63 31957.0 64 27979.5 65 24002.0 66 20417.0 67 16832.0 68 13509.0 69 10186.0 70 8199.0 71 6212.0 72 5023.0 73 3834.0 74 3117.5 75 1953.5 76 1506.0 77 1037.0 78 568.0 79 447.0 80 326.0 81 203.0 82 80.0 83 51.5 84 23.0 85 19.5 86 16.0 87 9.0 88 2.0 89 4.0 90 6.0 91 3.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1830589.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.251721863906447 #Duplication Level Percentage of deduplicated Percentage of total 1 69.39559327211452 19.605449997045568 2 12.373175204502061 6.991270089019521 3 4.789289449562265 4.059170203643241 4 2.360084424917587 2.6670579499243705 5 1.4502309038179688 2.048576006655346 6 0.9374930957567008 1.5891476514390552 7 0.6692132438830228 1.3234498503678027 8 0.5276702551709614 1.192607462795724 9 0.4461029443447028 1.1342858675666654 >10 6.591589408470225 45.815710048947835 >50 0.37947855691964955 6.4907793500615405 >100 0.07304791062644138 3.8707569278315264 >500 0.0041016091164767 0.7667781034615 >1k 0.0021484619181544617 1.136372212340683 >5k 7.812588793288951E-4 1.3085882788996452 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGC 6711 0.36660331729295875 No Hit CTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGCT 6330 0.3457903439821828 No Hit TCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGC 5638 0.3079883032182538 No Hit GCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGC 5036 0.2751027128426971 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3602 0.19676726998796562 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2426 0.13252565157990132 No Hit TCCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTG 2274 0.12422231314620595 No Hit CGCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTG 2092 0.11428015791638647 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 1926 0.10521203831116652 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.4627226537469634E-5 0.0 0.0 0.3626155297557234 0.0 2 5.4627226537469634E-5 0.0 0.0 1.3858927372556047 0.0 3 5.4627226537469634E-5 0.0 0.0 2.025249796650149 0.0 4 5.4627226537469634E-5 0.0 0.0 2.6879873090027306 0.0 5 5.4627226537469634E-5 0.0 0.0 3.816039537001479 0.0 6 5.4627226537469634E-5 0.0 0.0 4.585464022781738 0.0 7 5.4627226537469634E-5 0.0 0.0 5.281087125509877 0.0 8 5.4627226537469634E-5 0.0 0.0 6.325286560773609 0.0 9 5.4627226537469634E-5 0.0 0.0 6.848069118737193 0.0 10 5.4627226537469634E-5 0.0 0.0 7.813659975013507 0.0 11 5.4627226537469634E-5 0.0 0.0 9.686390555171041 0.0 12 5.4627226537469634E-5 0.0 0.0 11.32564436910743 0.0 13 5.4627226537469634E-5 0.0 0.0 11.83619042832662 0.0 14 1.0925445307493927E-4 0.0 0.0 12.054262316664198 0.0 15 1.0925445307493927E-4 0.0 0.0 12.333571325950281 0.0 16 1.0925445307493927E-4 0.0 0.0 12.945396263169942 0.0 17 1.0925445307493927E-4 0.0 0.0 13.854065549394212 0.0 18 1.0925445307493927E-4 0.0 0.0 14.79234279240179 0.0 19 1.0925445307493927E-4 0.0 0.0 15.513749946055613 0.0 20 1.0925445307493927E-4 0.0 0.0 16.301037534913625 0.0 21 1.0925445307493927E-4 0.0 0.0 17.388501733595035 0.0 22 1.0925445307493927E-4 0.0 0.0 18.58090483445492 0.0 23 1.638816796124089E-4 0.0 0.0 19.684811828324108 0.0 24 1.638816796124089E-4 0.0 0.0 20.467674611832585 0.0 25 1.638816796124089E-4 0.0 0.0 21.184493078457262 0.0 26 1.638816796124089E-4 0.0 0.0 21.83930964296191 0.0 27 1.638816796124089E-4 0.0 0.0 22.59917436409811 0.0 28 1.638816796124089E-4 0.0 0.0 23.28381739429222 0.0 29 1.638816796124089E-4 0.0 0.0 24.08388775416 0.0 30 1.638816796124089E-4 0.0 0.0 24.989661797377785 0.0 31 1.638816796124089E-4 0.0 0.0 25.723742467588302 0.0 32 1.638816796124089E-4 0.0 0.0 26.405654136455535 0.0 33 1.638816796124089E-4 0.0 0.0 27.10045783078561 0.0 34 1.638816796124089E-4 0.0 0.0 27.853821911963855 0.0 35 1.638816796124089E-4 0.0 0.0 28.632533026255484 0.0 36 1.638816796124089E-4 0.0 0.0 29.312041097155067 0.0 37 2.1850890614987854E-4 0.0 0.0 30.050054927676282 0.0 38 2.731361326873482E-4 0.0 0.0 30.930755073913367 0.0 39 2.731361326873482E-4 0.0 0.0 32.533736409428876 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCATA 20 7.0343824E-4 45.000004 24 GTACGGA 20 7.0343824E-4 45.000004 9 TCGTACG 80 0.0 42.187504 30 GTTTACG 70 0.0 41.785713 1 CGGTCGT 55 6.184564E-11 40.909092 6 CTCCGCG 50 1.0822987E-9 40.5 1 ACACGCG 305 0.0 39.836067 36 CGTTTTT 2260 0.0 39.723454 1 CTACGAA 125 0.0 39.600002 11 TACGAAT 120 0.0 39.375004 12 CCCGATC 40 3.4597178E-7 39.375004 41 CCGATAA 70 0.0 38.571426 15 AAGCGTA 70 0.0 38.571426 11 CGCGTAA 35 6.2503204E-6 38.571426 13 TGGGCGA 1820 0.0 38.324173 6 TTTGGGA 13885 0.0 38.27512 4 TTGTTCG 485 0.0 38.041237 1 TATGCGG 160 0.0 37.968754 2 TTGGGAC 4660 0.0 37.70923 5 GTATTCG 30 1.1401861E-4 37.500004 1 >>END_MODULE