##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933949.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1147974 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.39282509882628 33.0 31.0 34.0 31.0 34.0 2 32.607463235230064 34.0 31.0 34.0 31.0 34.0 3 32.676009212752206 34.0 31.0 34.0 31.0 34.0 4 36.060454330847215 37.0 35.0 37.0 35.0 37.0 5 36.0887668187607 37.0 35.0 37.0 35.0 37.0 6 35.619658633383686 37.0 35.0 37.0 33.0 37.0 7 36.001342364896765 37.0 35.0 37.0 35.0 37.0 8 35.97821988999751 37.0 35.0 37.0 35.0 37.0 9 37.86385144611289 39.0 38.0 39.0 35.0 39.0 10 37.58060112859699 39.0 37.0 39.0 35.0 39.0 11 37.537110596581456 39.0 37.0 39.0 35.0 39.0 12 37.3133877596531 39.0 37.0 39.0 35.0 39.0 13 37.221696658635125 39.0 37.0 39.0 34.0 39.0 14 38.35785653682052 40.0 38.0 41.0 34.0 41.0 15 38.380633185072135 40.0 38.0 41.0 34.0 41.0 16 38.51142883026967 40.0 38.0 41.0 34.0 41.0 17 38.46291379421485 40.0 38.0 41.0 34.0 41.0 18 38.44585591659742 40.0 38.0 41.0 34.0 41.0 19 38.47303684578222 40.0 38.0 41.0 34.0 41.0 20 38.38445121579409 40.0 37.0 41.0 34.0 41.0 21 38.344264765578316 40.0 37.0 41.0 34.0 41.0 22 38.36914773331103 40.0 37.0 41.0 34.0 41.0 23 38.311820650990356 40.0 37.0 41.0 34.0 41.0 24 38.26543719631281 40.0 37.0 41.0 34.0 41.0 25 38.19079090641426 40.0 37.0 41.0 34.0 41.0 26 38.1443586701441 40.0 37.0 41.0 34.0 41.0 27 38.081614217743606 40.0 37.0 41.0 34.0 41.0 28 38.02071039936445 40.0 37.0 41.0 34.0 41.0 29 37.98304404106713 40.0 37.0 41.0 34.0 41.0 30 37.92397824340969 40.0 36.0 41.0 34.0 41.0 31 37.88600787125841 40.0 36.0 41.0 33.0 41.0 32 37.74206384465153 40.0 36.0 41.0 33.0 41.0 33 37.6779082104647 40.0 36.0 41.0 33.0 41.0 34 37.585807692508716 40.0 36.0 41.0 33.0 41.0 35 37.50497136694734 40.0 36.0 41.0 33.0 41.0 36 37.445439530860455 40.0 36.0 41.0 33.0 41.0 37 37.32414410082458 40.0 35.0 41.0 32.0 41.0 38 37.31176577169866 39.0 35.0 41.0 32.0 41.0 39 37.27490692297909 39.0 35.0 41.0 32.0 41.0 40 37.13945524898647 39.0 35.0 41.0 32.0 41.0 41 37.03039267439855 39.0 35.0 41.0 32.0 41.0 42 36.9697179552847 39.0 35.0 41.0 32.0 41.0 43 36.86472951477995 39.0 35.0 41.0 32.0 41.0 44 36.743000277009756 39.0 35.0 41.0 31.0 41.0 45 36.79731248268689 39.0 35.0 41.0 32.0 41.0 46 36.72615320556041 39.0 35.0 41.0 31.0 41.0 47 36.59979494309105 39.0 35.0 41.0 31.0 41.0 48 36.55486274079378 39.0 35.0 40.0 31.0 41.0 49 36.540910334206174 39.0 35.0 40.0 31.0 41.0 50 36.43899861843561 38.0 35.0 40.0 31.0 41.0 51 35.437998595787015 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 6.0 9 10.0 10 28.0 11 18.0 12 12.0 13 12.0 14 12.0 15 30.0 16 49.0 17 100.0 18 178.0 19 353.0 20 665.0 21 1164.0 22 1700.0 23 2393.0 24 3212.0 25 4377.0 26 6155.0 27 7520.0 28 9103.0 29 10955.0 30 13999.0 31 18370.0 32 25170.0 33 36637.0 34 68622.0 35 85168.0 36 83142.0 37 132904.0 38 251999.0 39 383692.0 40 217.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.507133436819995 4.494091329594572 52.69492166198886 16.30385357159657 2 19.3878084346858 7.709843602729678 51.49567847355427 21.40666948903024 3 20.818851298025915 7.845038302261201 49.353818117831935 21.982292281880948 4 19.36794735769277 4.777373006705727 52.03349553212878 23.821184103472724 5 21.07469332929143 5.645511135269614 47.729739523717434 25.550056011721523 6 21.45327333197442 9.018671154573186 50.848189941584046 18.679865571868355 7 81.28468066349934 2.5709641507560277 11.381877986783673 4.762477198960952 8 81.96588076036565 5.297245407997045 7.565589464569755 5.171284367067547 9 76.2136598912519 5.733143782002031 9.664069046859947 8.38912727988613 10 40.23584157829359 28.541848508764133 16.86675830637279 14.355551606569486 11 32.24803000764826 23.006705726784755 24.621724882270854 20.123539383296137 12 27.451754133804425 21.547090787770454 29.565042413852577 21.436112664572544 13 25.532372684398773 22.48779153534836 31.58773630761672 20.39209947263614 14 22.08412385646365 23.775102920449417 31.064815056786998 23.075958166299934 15 18.782394026345546 24.3475026437881 35.261948441341005 21.60815488852535 16 22.212088427089814 24.847601078073197 28.20778170934185 24.73252878549514 17 21.869920398894052 24.383740398301704 28.944035317873052 24.80230388493119 18 21.967048034188927 23.293907353302426 31.31804378844817 23.421000824060474 19 22.516624940982986 25.876718462264826 27.500448616432077 24.106207980320114 20 24.163700571615735 27.709599694766606 29.175051002897277 18.951648730720382 21 25.058494356143957 27.4598553625779 28.117448653018272 19.364201628259874 22 22.5574795247976 22.766891933092563 29.095780914898768 25.579847627211073 23 22.43709352302404 24.06561472646593 29.320089130938502 24.17720261957152 24 23.140855106474536 23.230142842956372 28.847953002419914 24.78104904814917 25 21.14551374856922 27.40610850071517 25.714171226874477 25.73420652384113 26 21.75441255638194 24.884187272534046 26.63152649798689 26.729873673097128 27 20.981050093469015 26.75051873997146 27.08023004005317 25.18820112650635 28 18.58735476587449 27.04852200485377 28.424424246542166 25.939698982729574 29 21.737774548900934 25.885690790906413 27.15819347824951 25.218341181943142 30 22.554953335180063 25.529498054833994 28.686015536937248 23.229533073048692 31 25.535682863897613 25.300137459559192 25.279927942618908 23.884251733924287 32 25.6155627218038 28.634097984797563 24.166662311167325 21.583676982231307 33 24.19619259669644 26.549817330357655 25.45127328667722 23.80271678626868 34 24.161174381998197 25.457632315714466 27.189553073501667 23.19164022878567 35 23.11733541003542 27.58599062348102 25.48097779217996 23.8156961743036 36 25.13027298527667 26.503649037347536 25.007622123846012 23.358455853529783 37 21.87828295762796 28.2783407986592 27.385289213867214 22.458087029845625 38 21.561028385660304 27.18371670438529 25.953288140672175 25.30196676928223 39 24.604912654816225 25.712429027138246 26.931794622526294 22.750863695519236 40 24.312223099129422 24.91685351758838 28.463188190673307 22.30773519260889 41 24.298372611226387 25.941092742518556 25.30126988938774 24.459264756867316 42 22.144839517271297 25.805375383066163 27.266558301843073 24.783226797819463 43 23.912126929703984 23.335981476932403 27.429628197154294 25.322263396209323 44 22.03464538395469 22.983708690266504 27.151573119251832 27.830072806526978 45 21.894746745135343 22.003808448623403 25.93098798404842 30.170456822192836 46 23.455235048877412 24.682179213118065 27.360201537665485 24.50238420033903 47 19.94435414042478 24.287832302822192 32.15186058220831 23.61595297454472 48 20.615275258847326 24.43069268119313 30.298856942753062 24.655175117206486 49 22.662882608839574 22.59511103910019 31.63259795082467 23.10940840123557 50 23.227529543352027 22.859315629099612 27.926242231966924 25.986912595581437 51 21.168859225034716 23.267774357258965 26.322111824832266 29.241254592874057 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 210.0 1 591.0 2 972.0 3 2006.5 4 3041.0 5 2153.5 6 1266.0 7 1330.0 8 1394.0 9 1486.5 10 1579.0 11 1548.5 12 1518.0 13 1589.5 14 1661.0 15 1521.5 16 1382.0 17 1471.0 18 1560.0 19 1632.5 20 1705.0 21 2021.0 22 2337.0 23 2980.5 24 3624.0 25 4294.0 26 6405.0 27 7846.0 28 9147.0 29 10448.0 30 12715.5 31 14983.0 32 17553.0 33 20123.0 34 23552.5 35 26982.0 36 28461.0 37 29940.0 38 34450.5 39 38961.0 40 43090.0 41 47219.0 42 52706.5 43 58194.0 44 65346.0 45 72498.0 46 97351.0 47 122204.0 48 126068.0 49 129932.0 50 129086.5 51 128241.0 52 110391.0 53 92541.0 54 82162.0 55 71783.0 56 64994.0 57 58205.0 58 54706.0 59 51207.0 60 46865.0 61 42523.0 62 38081.0 63 33639.0 64 28124.5 65 22610.0 66 18704.5 67 14799.0 68 12834.0 69 10869.0 70 8567.0 71 6265.0 72 5073.5 73 3882.0 74 3225.5 75 1945.0 76 1321.0 77 929.5 78 538.0 79 380.0 80 222.0 81 191.5 82 161.0 83 93.0 84 25.0 85 24.5 86 24.0 87 13.5 88 3.0 89 3.5 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1147974.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.34928796521579 #Duplication Level Percentage of deduplicated Percentage of total 1 69.25591563539709 19.633558956425627 2 12.523662404645963 7.1007382377691055 3 4.901560595424435 4.168672583959256 4 2.47134412304266 2.802433848211202 5 1.4080326080314451 1.9958360934748627 6 0.9297496684790673 1.5814644652366192 7 0.6788614185234879 1.3471666489538063 8 0.5108077785597975 1.1584829447411105 9 0.41069818481844383 1.0478700997388533 >10 6.559857742147798 45.53249121944415 >50 0.27383996850751685 4.850524575039964 >100 0.06729656686768466 3.468345380771037 >500 0.003411346707461091 0.5987181759843868 >1k 0.003411346707461091 1.7688121854082057 >5k 0.0015506121397550416 2.9448845848418537 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGC 8064 0.7024549336483231 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCG 7043 0.6135156371137325 No Hit GAATCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTC 6664 0.5805009521121558 No Hit CCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 6165 0.5370330686931933 No Hit GCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 5560 0.4843315266722069 No Hit CTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGCT 3930 0.34234224816938363 No Hit TCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 3751 0.32674956053011656 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGACATGAGT 1614 0.14059551871383846 No Hit GAATGACTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCT 1532 0.13345249979529153 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTC 1515 0.13197163001949522 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1501 0.13075209020413356 No Hit GAACTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCT 1310 0.11411408272312788 No Hit TCCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTG 1295 0.11280743292095466 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGACATGAGTCGTA 1260 0.10975858338255048 No Hit CGCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTG 1231 0.10723239376501559 No Hit GCCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTG 1180 0.10278978443762664 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.7109986811548E-5 0.0 0.0 0.3577607158350276 0.0 2 8.7109986811548E-5 0.0 0.0 1.8016087472364357 0.0 3 8.7109986811548E-5 0.0 0.0 2.4884709932454916 0.0 4 8.7109986811548E-5 0.0 0.0 3.3133154583640394 0.0 5 8.7109986811548E-5 0.0 0.0 5.080515760809914 0.0 6 8.7109986811548E-5 0.0 0.0 5.829226097455169 0.0 7 8.7109986811548E-5 0.0 0.0 6.629592656279672 0.0 8 8.7109986811548E-5 0.0 0.0 7.717596391555906 0.0 9 8.7109986811548E-5 0.0 0.0 8.163599524031032 0.0 10 8.7109986811548E-5 0.0 0.0 9.732798826454257 0.0 11 8.7109986811548E-5 0.0 0.0 11.491201020232166 0.0 12 8.7109986811548E-5 0.0 0.0 13.830278386095852 0.0 13 8.7109986811548E-5 0.0 0.0 14.391963581056714 0.0 14 8.7109986811548E-5 0.0 0.0 14.629338295118183 0.0 15 8.7109986811548E-5 0.0 0.0 15.053041270969551 0.0 16 8.7109986811548E-5 0.0 0.0 15.778667461109746 0.0 17 8.7109986811548E-5 0.0 0.0 16.704820840890125 0.0 18 8.7109986811548E-5 0.0 0.0 17.663640465724832 0.0 19 1.74219973623096E-4 0.0 0.0 18.542493122666542 0.0 20 1.74219973623096E-4 0.0 0.0 19.374045056769578 0.0 21 1.74219973623096E-4 0.0 0.0 20.41849379864004 0.0 22 1.74219973623096E-4 0.0 0.0 21.584635192086232 0.0 23 1.74219973623096E-4 0.0 0.0 22.66497324852305 0.0 24 1.74219973623096E-4 0.0 0.0 23.490079043602034 0.0 25 1.74219973623096E-4 0.0 0.0 24.22206426277947 0.0 26 1.74219973623096E-4 0.0 0.0 24.861103126028986 0.0 27 1.74219973623096E-4 0.0 0.0 25.54439386257877 0.0 28 1.74219973623096E-4 0.0 0.0 26.21627319085624 0.0 29 1.74219973623096E-4 0.0 0.0 26.914459735150796 0.0 30 1.74219973623096E-4 0.0 0.0 27.73869443036166 0.0 31 1.74219973623096E-4 0.0 0.0 28.43391923510463 0.0 32 1.74219973623096E-4 0.0 0.0 29.08280152686385 0.0 33 1.74219973623096E-4 0.0 0.0 29.770099322806963 0.0 34 1.74219973623096E-4 0.0 0.0 30.44467906067559 0.0 35 1.74219973623096E-4 0.0 0.0 31.15026995384913 0.0 36 1.74219973623096E-4 0.0 0.0 31.8198844224695 0.0 37 1.74219973623096E-4 0.0 0.0 32.4784359227648 0.0 38 1.74219973623096E-4 0.0 0.0 33.21181490173122 0.0 39 1.74219973623096E-4 0.0 0.0 34.13143503250074 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGAAC 20 7.033281E-4 45.000004 26 CGTCGAC 20 7.033281E-4 45.000004 31 CCGCGAA 20 7.033281E-4 45.000004 35 ACGCCCG 45 3.8562575E-10 45.0 28 CTACGGC 75 0.0 42.0 6 TACGGGA 210 0.0 40.714287 4 TATTGCG 50 1.0822987E-9 40.5 1 TACGGCT 1090 0.0 40.458717 7 TTACACG 180 0.0 40.0 34 CCCGCAT 45 1.9283107E-8 40.0 23 ACACGCG 170 0.0 39.705883 36 CGTTTTT 1100 0.0 39.272728 1 GTTTGCG 235 0.0 39.255318 1 TTGTGCG 345 0.0 38.47826 1 TTTGGGA 5845 0.0 38.41745 4 TTGGGAC 2135 0.0 37.728336 5 TCTCGCA 30 1.1399209E-4 37.500004 11 TTCTACG 90 0.0 37.5 1 ATACGGC 2210 0.0 37.46606 6 TGGGCGA 1265 0.0 37.35178 6 >>END_MODULE