##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933947.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1646988 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.49836853698995 34.0 31.0 34.0 31.0 34.0 2 32.724736306518324 34.0 31.0 34.0 31.0 34.0 3 32.77550109654715 34.0 31.0 34.0 31.0 34.0 4 36.1326494182107 37.0 35.0 37.0 35.0 37.0 5 36.155679337068634 37.0 35.0 37.0 35.0 37.0 6 35.80428394135234 37.0 35.0 37.0 35.0 37.0 7 36.10448649291919 37.0 35.0 37.0 35.0 37.0 8 36.11892132790281 37.0 37.0 37.0 35.0 37.0 9 37.98161795957226 39.0 39.0 39.0 37.0 39.0 10 37.6780717285129 39.0 37.0 39.0 35.0 39.0 11 37.60198495678171 39.0 37.0 39.0 35.0 39.0 12 37.30027966202547 39.0 37.0 39.0 35.0 39.0 13 37.18932196227295 39.0 37.0 39.0 34.0 39.0 14 38.10877067713912 40.0 38.0 41.0 33.0 41.0 15 38.27203476892363 40.0 38.0 41.0 33.0 41.0 16 38.4485958610506 40.0 38.0 41.0 34.0 41.0 17 38.46743692121618 40.0 38.0 41.0 34.0 41.0 18 38.417670316966486 40.0 37.0 41.0 34.0 41.0 19 38.43177242335706 40.0 37.0 41.0 34.0 41.0 20 38.34125445965605 40.0 37.0 41.0 34.0 41.0 21 38.2754932033506 40.0 37.0 41.0 34.0 41.0 22 38.32718149737582 40.0 37.0 41.0 34.0 41.0 23 38.303121819952544 40.0 37.0 41.0 34.0 41.0 24 38.269389940910315 40.0 37.0 41.0 34.0 41.0 25 38.17180210177609 40.0 36.0 41.0 34.0 41.0 26 38.11440581230707 40.0 36.0 41.0 34.0 41.0 27 38.096823413406774 40.0 36.0 41.0 34.0 41.0 28 38.014193181735386 40.0 36.0 41.0 34.0 41.0 29 37.97235256116013 40.0 36.0 41.0 34.0 41.0 30 37.89964104170765 40.0 36.0 41.0 34.0 41.0 31 37.7848539272903 40.0 36.0 41.0 33.0 41.0 32 37.72719776950409 40.0 36.0 41.0 33.0 41.0 33 37.64820144409067 40.0 35.0 41.0 33.0 41.0 34 37.5116758592048 40.0 35.0 41.0 33.0 41.0 35 37.43915499080746 40.0 35.0 41.0 33.0 41.0 36 37.36117263756627 40.0 35.0 41.0 33.0 41.0 37 37.27454784127146 40.0 35.0 41.0 32.0 41.0 38 37.230693241237944 39.0 35.0 41.0 32.0 41.0 39 37.19437907258583 39.0 35.0 41.0 32.0 41.0 40 37.05820625286887 39.0 35.0 41.0 32.0 41.0 41 36.914307208067086 39.0 35.0 41.0 32.0 41.0 42 36.909843909002376 39.0 35.0 41.0 32.0 41.0 43 36.794421695847205 39.0 35.0 41.0 31.0 41.0 44 36.7081180919351 39.0 35.0 41.0 31.0 41.0 45 36.75576810517138 39.0 35.0 41.0 32.0 41.0 46 36.725215970000995 39.0 35.0 41.0 32.0 41.0 47 36.661242826298675 39.0 35.0 41.0 31.0 41.0 48 36.58445234573658 39.0 35.0 41.0 31.0 41.0 49 36.554095111804095 39.0 35.0 41.0 31.0 41.0 50 36.475475231149225 38.0 35.0 40.0 31.0 41.0 51 35.53200630484254 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 37.0 10 26.0 11 36.0 12 21.0 13 30.0 14 31.0 15 52.0 16 94.0 17 138.0 18 274.0 19 491.0 20 847.0 21 1350.0 22 2094.0 23 3012.0 24 4445.0 25 6557.0 26 9271.0 27 11262.0 28 13305.0 29 15868.0 30 20212.0 31 26312.0 32 35832.0 33 56672.0 34 114190.0 35 116311.0 36 112454.0 37 181690.0 38 340778.0 39 572938.0 40 349.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.237942231515955 4.559535345734153 55.06536781081587 16.137154611934026 2 20.416420763235678 4.2597153106154995 53.73348196829607 21.59038195785276 3 21.792872807816448 4.362448299562596 51.463277206634174 22.38140168598678 4 20.23165924706191 4.736585816047232 50.33236429166455 24.699390645226316 5 19.08113477450959 5.6889910551868015 49.525861754912604 25.704012415391002 6 22.520807680444545 6.354205373688211 52.33492897337443 18.790057972492818 7 84.71178903549995 2.29819525096722 8.417122650559689 4.572893062973137 8 86.42801283312326 2.7103415446864214 6.699988099488278 4.161657522702048 9 80.88146361722124 5.21594571423714 8.74511532567329 5.157475342868315 10 41.565512317029636 28.950302005843394 15.595559894789762 13.888625782337211 11 32.44905245211258 23.547833985432803 25.1086832448081 18.894430317646517 12 30.054620920128137 21.318491695142892 28.269787029413695 20.35710035531528 13 28.015929684976452 20.679385642154042 30.864220018603657 20.440464654265845 14 20.899484392114577 22.856632835211915 33.76812702946227 22.47575574321124 15 19.7085831833626 23.56598833749851 35.480707813293115 21.244720665845772 16 26.341175527690545 23.793555265733566 29.152124969945138 20.713144236630747 17 26.375784158718822 23.874794473305208 27.727463709510936 22.021957658465027 18 25.953012408104975 23.137205614127122 29.75522590328527 21.15455607448263 19 26.353076039412553 24.786640825555498 27.84671169431714 21.013571440714806 20 25.205101676514946 28.955645092738987 27.05302042273532 18.786232808010745 21 25.477781258879844 25.25743964133315 30.825543355507147 18.439235744279863 22 23.9162641136426 22.185468260849504 31.924701333585915 21.97356629192198 23 23.044430196212723 23.39519170752914 31.21188496819649 22.34849312806165 24 23.617597699558225 25.06180980067857 28.449205458691868 22.871387041071337 25 24.199326285315983 25.9356473756943 26.32842497941697 23.53660135957275 26 21.791840620575258 26.14390633082937 27.067046025836255 24.99720702275912 27 20.975623380376785 25.35640818269471 30.920565298593555 22.74740313833495 28 19.32709892239652 26.223020447022076 29.073253721338588 25.376626909242813 29 21.913031546070766 26.899649542073167 27.95837006705574 23.228948844800325 30 24.621733734550585 24.407888824933757 28.432569029039676 22.53780841147598 31 23.6260373481774 26.383009469407188 28.412653886974283 21.578299295441134 32 27.062674409285314 25.67826845125769 25.234549371337256 22.024507768119744 33 26.43382951181186 24.908924655188745 26.018708090162164 22.63853774283723 34 22.293544336692193 25.824899756403813 29.116423434779126 22.765132472124872 35 22.710426548341577 27.884599037758623 27.0558133999762 22.3491610139236 36 24.66053183144018 27.39752809370803 25.957869759828245 21.984070315023548 37 23.31279887892322 29.002214952385806 26.319196011142765 21.365790157548204 38 25.15974615479894 26.27675490046072 26.24554641563873 22.31795252910161 39 23.60199345714723 24.54431969146102 26.27772637080537 25.575960480586378 40 25.026168982409104 24.569456486628923 27.22430278787702 23.180071743084955 41 22.795126619016045 25.055009508265996 26.625755621777454 25.524108250940504 42 23.14285228550542 24.153181443944945 28.814660458971165 23.88930581157847 43 22.906056388996156 23.606061489215467 29.446480484375115 24.041401637413266 44 23.395252424425678 23.942797397430944 27.730135252958732 24.93181492518464 45 22.458572861490186 23.442186585451747 26.390416930785165 27.7088236222729 46 21.90459189745159 24.387427230799496 28.31763194388787 25.39034892786104 47 20.238763123957188 25.64256691609168 30.77466259620592 23.344007363745213 48 21.144173485174147 26.220652488056988 29.037734336862197 23.597439689906665 49 24.163260448770725 23.725188040228588 29.21205254683094 22.899498964169744 50 22.07714931742065 24.50017850767583 27.00116819308945 26.421503981814077 51 21.16676017068734 24.560713253527044 26.259693452532744 28.01283312325287 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 342.0 1 1011.0 2 1680.0 3 4460.0 4 7240.0 5 4824.0 6 2408.0 7 2395.5 8 2383.0 9 2489.5 10 2596.0 11 2619.0 12 2642.0 13 2522.0 14 2402.0 15 2486.0 16 2570.0 17 2617.5 18 2665.0 19 2911.0 20 3157.0 21 3757.0 22 4357.0 23 5360.0 24 6363.0 25 7826.0 26 10820.0 27 12351.0 28 15194.0 29 18037.0 30 22328.5 31 26620.0 32 30134.0 33 33648.0 34 37377.0 35 41106.0 36 46483.5 37 51861.0 38 55674.0 39 59487.0 40 65379.5 41 71272.0 42 77325.5 43 83379.0 44 91711.5 45 100044.0 46 113403.0 47 126762.0 48 146722.0 49 166682.0 50 164246.0 51 161810.0 52 146846.0 53 131882.0 54 119558.0 55 107234.0 56 100487.5 57 93741.0 58 89892.5 59 86044.0 60 75746.5 61 65449.0 62 57939.5 63 50430.0 64 43450.0 65 36470.0 66 30930.5 67 25391.0 68 21666.5 69 17942.0 70 14716.0 71 11490.0 72 9774.5 73 8059.0 74 6197.5 75 3613.0 76 2890.0 77 2180.0 78 1470.0 79 1067.0 80 664.0 81 429.5 82 195.0 83 149.5 84 104.0 85 64.0 86 24.0 87 17.5 88 11.0 89 8.5 90 6.0 91 4.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1646988.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.281167874210126 #Duplication Level Percentage of deduplicated Percentage of total 1 70.49478189042976 19.231799790086427 2 11.429226483519248 6.2360529273851375 3 4.149903677758395 3.396426566841864 4 2.0793336492216765 2.269066014036421 5 1.217651306207982 1.6609474848455597 6 0.8706032941435694 1.4250644771622634 7 0.6440359900521373 1.2299037773151837 8 0.5096513055537435 1.1123106259297628 9 0.47425796350918015 1.164448000635747 >10 7.76909755035064 51.724910735181986 >50 0.28812796317553474 4.809424489715561 >100 0.06813949614614179 3.387182495132802 >500 0.0024819012718385325 0.4670701326121029 >1k 0.0027075286601874905 1.885392483119229 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGC 4420 0.2683686827104994 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4183 0.25397877823032106 No Hit CTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGCT 4053 0.24608558168001224 Illumina Single End Adapter 2 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGC 3516 0.2134806082375828 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGC 3247 0.19714776306809764 Illumina Single End Adapter 2 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2658 0.16138551100554469 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 2095 0.12720189825305345 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2143379308167394E-4 0.0 0.0 0.25974688340170055 0.0 2 1.2143379308167394E-4 0.0 0.0 0.9983072129244415 0.0 3 1.2143379308167394E-4 0.0 0.0 1.509057746625962 0.0 4 1.2143379308167394E-4 0.0 0.0 2.0287943810155267 0.0 5 1.2143379308167394E-4 0.0 0.0 2.9662632636060495 0.0 6 1.2143379308167394E-4 0.0 0.0 3.686001355201131 0.0 7 1.2143379308167394E-4 0.0 0.0 4.3150284033642015 0.0 8 1.2143379308167394E-4 0.0 0.0 5.23403934940631 0.0 9 1.2143379308167394E-4 0.0 0.0 5.7410861524188395 0.0 10 1.821506896225109E-4 0.0 0.0 6.612191467090228 0.0 11 1.821506896225109E-4 0.0 0.0 8.157800785433773 0.0 12 1.821506896225109E-4 0.0 0.0 9.452770754856745 0.0 13 1.821506896225109E-4 0.0 0.0 9.872810245126255 0.0 14 1.821506896225109E-4 0.0 0.0 10.076879734400007 0.0 15 1.821506896225109E-4 0.0 0.0 10.328247686079072 0.0 16 1.821506896225109E-4 0.0 0.0 10.863709996672714 0.0 17 1.821506896225109E-4 0.0 0.0 11.547807269998325 0.0 18 1.821506896225109E-4 0.0 0.0 12.267363210903783 0.0 19 1.821506896225109E-4 0.0 0.0 12.813025960116285 0.0 20 1.821506896225109E-4 0.0 0.0 13.464396826206384 0.0 21 1.821506896225109E-4 0.0 0.0 14.316862053639735 0.0 22 1.821506896225109E-4 0.0 0.0 15.259856173815473 0.0 23 1.821506896225109E-4 0.0 0.0 16.099206551596005 0.0 24 1.821506896225109E-4 0.0 0.0 16.73224091493077 0.0 25 1.821506896225109E-4 0.0 0.0 17.330484496547637 0.0 26 1.821506896225109E-4 0.0 0.0 17.851556902661102 0.0 27 1.821506896225109E-4 0.0 0.0 18.464858274620095 0.0 28 1.821506896225109E-4 0.0 0.0 19.023575156588876 0.0 29 1.821506896225109E-4 0.0 0.0 19.677981867506016 0.0 30 1.821506896225109E-4 0.0 0.0 20.45090796047087 0.0 31 1.821506896225109E-4 0.0 0.0 21.051094482777046 0.0 32 1.821506896225109E-4 0.0 0.0 21.612786492676328 0.0 33 1.821506896225109E-4 0.0 0.0 22.178607251540388 0.0 34 1.821506896225109E-4 0.0 0.0 22.80915222211698 0.0 35 1.821506896225109E-4 0.0 0.0 23.46580545820613 0.0 36 1.821506896225109E-4 0.0 0.0 24.04540895258496 0.0 37 1.821506896225109E-4 0.0 0.0 24.656342365578862 0.0 38 1.821506896225109E-4 0.0 0.0 25.38379150303463 0.0 39 1.821506896225109E-4 0.0 0.0 26.748585903479565 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 2185 0.0 41.39588 1 ACGGGTA 55 6.184564E-11 40.909092 5 TTTGGGC 3185 0.0 38.359497 4 TTTGGGA 8705 0.0 38.253876 4 TTGGGAC 3720 0.0 37.741936 5 TTGGGCA 1835 0.0 37.64305 5 TCGTTTG 550 0.0 37.636364 1 TTGGGAT 4965 0.0 37.29607 5 TGGGCGA 1715 0.0 37.259476 6 TTTCTCG 500 0.0 36.9 1 GGGCGAT 2470 0.0 36.710526 7 TTTCGCG 585 0.0 36.538464 1 TTGGGAG 4945 0.0 36.309402 5 CGTTTGG 1050 0.0 36.214287 2 TCGCACT 25 0.002107373 36.0 11 CGTTACC 25 0.002107373 36.0 24 GTTACCG 75 1.8189894E-12 36.0 38 ACAATCG 25 0.002107373 36.0 16 GAACCGT 25 0.002107373 36.0 42 TTTACGG 220 0.0 35.795456 2 >>END_MODULE