##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933946.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1610088 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.41484564818818 33.0 31.0 34.0 31.0 34.0 2 32.640654423857576 34.0 31.0 34.0 31.0 34.0 3 32.70079958362524 34.0 31.0 34.0 31.0 34.0 4 36.073887265789196 37.0 35.0 37.0 35.0 37.0 5 36.09386319257084 37.0 35.0 37.0 35.0 37.0 6 35.737469007905155 37.0 35.0 37.0 35.0 37.0 7 36.06043955361446 37.0 35.0 37.0 35.0 37.0 8 36.076034974485864 37.0 36.0 37.0 35.0 37.0 9 37.9287865011105 39.0 38.0 39.0 35.0 39.0 10 37.60031811925808 39.0 37.0 39.0 35.0 39.0 11 37.501249000054656 39.0 37.0 39.0 35.0 39.0 12 37.19002625943427 39.0 37.0 39.0 34.0 39.0 13 37.05040035078828 39.0 37.0 39.0 33.0 39.0 14 37.90481017186638 40.0 37.0 41.0 33.0 41.0 15 38.066004466836596 40.0 37.0 41.0 33.0 41.0 16 38.25785547125375 40.0 37.0 41.0 33.0 41.0 17 38.279616393638115 40.0 37.0 41.0 34.0 41.0 18 38.24183398671377 40.0 37.0 41.0 34.0 41.0 19 38.25971623911239 40.0 37.0 41.0 34.0 41.0 20 38.162490497413806 40.0 37.0 41.0 34.0 41.0 21 38.10278506516414 40.0 36.0 41.0 34.0 41.0 22 38.152687306532314 40.0 36.0 41.0 34.0 41.0 23 38.13568513025375 40.0 36.0 41.0 34.0 41.0 24 38.09052300246943 40.0 36.0 41.0 34.0 41.0 25 37.99179920600613 40.0 36.0 41.0 34.0 41.0 26 37.92415445615395 40.0 36.0 41.0 34.0 41.0 27 37.92356194195597 40.0 36.0 41.0 34.0 41.0 28 37.85608302154913 40.0 36.0 41.0 34.0 41.0 29 37.807882550518976 40.0 36.0 41.0 34.0 41.0 30 37.734588420011825 40.0 35.0 41.0 33.0 41.0 31 37.62411930279587 40.0 35.0 41.0 33.0 41.0 32 37.54162753837058 40.0 35.0 41.0 33.0 41.0 33 37.50754430813719 40.0 35.0 41.0 33.0 41.0 34 37.41009311292302 40.0 35.0 41.0 33.0 41.0 35 37.33324327614391 40.0 35.0 41.0 32.0 41.0 36 37.27616751382533 40.0 35.0 41.0 32.0 41.0 37 37.18786985556069 39.0 35.0 41.0 32.0 41.0 38 37.11668306328598 39.0 35.0 41.0 32.0 41.0 39 37.06833166882804 39.0 35.0 41.0 32.0 41.0 40 36.972074197186735 39.0 35.0 41.0 32.0 41.0 41 36.810855058853925 39.0 35.0 41.0 31.0 41.0 42 36.79684091801194 39.0 35.0 41.0 31.0 41.0 43 36.73371952340493 39.0 35.0 41.0 31.0 41.0 44 36.662370628189265 39.0 35.0 41.0 31.0 41.0 45 36.6828024306746 39.0 35.0 41.0 31.0 41.0 46 36.64384120619494 39.0 35.0 41.0 31.0 41.0 47 36.566292028758674 39.0 35.0 41.0 31.0 41.0 48 36.4678284665186 38.0 35.0 40.0 31.0 41.0 49 36.45872151087394 38.0 35.0 40.0 31.0 41.0 50 36.38074005892845 38.0 35.0 40.0 31.0 41.0 51 35.450792751700526 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 7.0 9 18.0 10 49.0 11 32.0 12 31.0 13 19.0 14 26.0 15 40.0 16 84.0 17 180.0 18 291.0 19 500.0 20 866.0 21 1396.0 22 2025.0 23 3282.0 24 4707.0 25 6838.0 26 9356.0 27 11730.0 28 13548.0 29 16617.0 30 20912.0 31 27503.0 32 38282.0 33 59013.0 34 120084.0 35 117336.0 36 112736.0 37 180063.0 38 333949.0 39 528284.0 40 282.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.50605184312907 4.6081332200476 55.32933603629119 15.556478900532145 2 20.655641182345313 4.476587615086877 53.421614222328216 21.44615698023959 3 21.644096471745645 4.6213623106314685 50.6623240468844 23.072217170738494 4 20.263550812129523 4.732163707822181 50.68027337636204 24.324012103686258 5 19.31279532547289 5.774342768842448 49.67958273088179 25.23327917480287 6 22.07730260706247 6.24350967152106 52.63258902618987 19.046598695226596 7 83.86299382394006 2.275714122457903 9.114657087066048 4.74663496653599 8 85.8841255881666 2.859222601497558 6.949061169327391 4.307590641008441 9 80.27480485538678 5.108913301633203 9.221669871460442 5.394611971519569 10 42.28284416752376 27.469989217980633 16.2007294011259 14.046437213369703 11 32.679207596106544 23.56063767943119 24.772310581781866 18.987844142680398 12 30.511810534579475 20.501798659452152 28.471984139997318 20.514406665971052 13 28.37223803916308 20.234546186295407 31.0142675431405 20.37894823140102 14 21.482676723259846 22.196861289569267 33.99870069213608 22.321761295034808 15 19.620977238511188 23.719510983250604 35.75630648759571 20.9032052906425 16 26.29595400996716 23.539769254848185 29.26635065909441 20.89792607609025 17 26.413338898246558 23.49349849200789 27.93878347022026 22.154379139525293 18 26.177451170370812 22.8541545555274 29.91221597825709 21.0561782958447 19 26.551902753141444 24.873982043217513 27.66184208564998 20.912273117991067 20 24.612505651864993 29.373115009862815 27.381360521909357 18.63301881636283 21 25.574068001252105 24.80802291551766 31.177985302666688 18.439923780563547 22 23.116189922538396 22.71732973601443 32.12830603047784 22.03817431096934 23 22.83235450484694 23.512441555989486 31.156930552864193 22.498273386299385 24 23.938691549778646 24.892366131540637 28.233239425422713 22.935702893258007 25 24.647286359503333 25.184896726141677 25.7166689025693 24.45114801178569 26 20.965934781204506 25.21682044708115 26.9866615986207 26.830583173093647 27 20.85358067385137 24.348979683098065 30.16717098692742 24.630268656123143 28 18.751459547552678 24.944288759372157 28.294167772196303 28.01008392087886 29 20.88115680633605 25.950072294185162 27.59414392256821 25.57462697691058 30 24.04502114170157 23.548774973790252 28.38062267404018 24.025581210468 31 22.96862034870144 24.73262331003026 28.53017971688504 23.768576624383265 32 25.170673901053853 24.622318780091522 26.376943372039293 23.83006394681533 33 25.39084820208585 22.94719294845996 27.739601810584265 23.922357038869926 34 21.24039182951491 23.096687882898326 31.08451215088865 24.57840813669812 35 20.57061477385087 25.96019596444418 28.42596181078301 25.04322745092194 36 23.184384952872144 24.581140906583986 27.1437337586517 25.090740381892168 37 21.727011194419187 26.72065129359389 27.373969621536215 24.17836789045071 38 22.44181684479358 25.791323207178742 27.992383025027202 23.77447692300048 39 21.746389017246262 24.253519062312122 29.230389891732628 24.76970202870899 40 24.692066520587694 22.171707384937967 30.168102613024878 22.968123481449464 41 21.70049090484495 22.52199879758125 28.940281524984968 26.83722877258883 42 19.813575407058494 22.556531071593604 31.647524855784283 25.98236866556362 43 20.16684802321364 22.281328722405235 31.209412156354187 26.34241109802694 44 21.66049309106086 22.385360303287772 28.880781671560808 27.07336493409056 45 21.27039018985298 21.87718932132902 27.035603022940364 29.816817465877644 46 20.699303392112732 22.385857170539747 29.380071151390485 27.53476828595704 47 18.597803349879012 23.372138665712683 32.231033334823934 25.799024649584368 48 19.243606560635197 24.77411172557028 30.565223764166927 25.417057949627598 49 22.183880632611384 22.267043788910918 30.856325865418537 24.69274971305916 50 20.434721580435355 22.840614922911044 29.460315212584653 27.264348284068944 51 19.77655879678626 22.560133359170432 28.15001416071668 29.513293683326623 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 205.0 1 868.0 2 1531.0 3 3727.5 4 5924.0 5 3974.0 6 2024.0 7 2142.5 8 2261.0 9 2296.5 10 2332.0 11 2367.5 12 2403.0 13 2348.0 14 2293.0 15 2265.0 16 2237.0 17 2366.0 18 2495.0 19 2625.0 20 2755.0 21 3438.5 22 4122.0 23 5045.5 24 5969.0 25 7393.0 26 10591.0 27 12365.0 28 14438.0 29 16511.0 30 20786.0 31 25061.0 32 28797.5 33 32534.0 34 36362.0 35 40190.0 36 42596.5 37 45003.0 38 49549.5 39 54096.0 40 59509.0 41 64922.0 42 70709.5 43 76497.0 44 85392.5 45 94288.0 46 110970.0 47 127652.0 48 147224.0 49 166796.0 50 169198.5 51 171601.0 52 152462.5 53 133324.0 54 122050.5 55 110777.0 56 103464.5 57 96152.0 58 90562.0 59 84972.0 60 74959.0 61 64946.0 62 55767.5 63 46589.0 64 40587.0 65 34585.0 66 29569.5 67 24554.0 68 19932.0 69 15310.0 70 12841.0 71 10372.0 72 8819.0 73 7266.0 74 5750.5 75 3198.5 76 2162.0 77 1645.5 78 1129.0 79 765.5 80 402.0 81 332.5 82 263.0 83 187.5 84 112.0 85 64.0 86 16.0 87 22.0 88 28.0 89 17.0 90 6.0 91 5.0 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1610088.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.729271482158257 #Duplication Level Percentage of deduplicated Percentage of total 1 70.47226215928886 20.24616751536038 2 11.64153397555317 6.689055801048722 3 4.420882055418719 3.810261622821786 4 2.1763161265092315 2.500959073179312 5 1.3165983589354615 1.8912455843410458 6 0.8759065276766514 1.509849385597025 7 0.6505591373214279 1.3083063049914183 8 0.5297483977227864 1.217542842833302 9 0.4407283899792111 1.1395625009046544 >10 7.175925952326859 49.012449942129656 >50 0.2176970138732528 3.8860029721499094 >100 0.07418290682993321 3.746861626942948 >500 0.004814227669114145 0.8798983247935652 >1k 0.002844770895385631 2.161836502906282 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTGC 4767 0.29607077377137153 TruSeq Adapter, Index 14 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTGC 4508 0.2799846964886391 TruSeq Adapter, Index 14 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTGCT 4214 0.26172482497851046 Illumina Paired End PCR Primer 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTGC 3865 0.24004899111104488 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3326 0.20657256000914237 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 3121 0.19384033667724992 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 2667 0.16564312012759552 No Hit CGCTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTG 1702 0.1057085078579556 No Hit TCCTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTG 1627 0.10105037737067789 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.210840649703618E-5 0.0 0.0 0.2770034929767814 0.0 2 6.210840649703618E-5 0.0 0.0 1.1623588275920322 0.0 3 6.210840649703618E-5 0.0 0.0 1.7418302602093798 0.0 4 6.210840649703618E-5 0.0 0.0 2.3608026393588424 0.0 5 6.210840649703618E-5 0.0 0.0 3.4421721048787397 0.0 6 6.210840649703618E-5 0.0 0.0 4.226414953716816 0.0 7 6.210840649703618E-5 0.0 0.0 4.931407475864673 0.0 8 6.210840649703618E-5 0.0 0.0 5.963649191845414 0.0 9 6.210840649703618E-5 0.0 0.0 6.511072686710292 0.0 10 6.210840649703618E-5 0.0 0.0 7.468846423301087 0.0 11 6.210840649703618E-5 0.0 0.0 9.203472108356811 0.0 12 6.210840649703618E-5 0.0 0.0 10.718482468039014 0.0 13 6.210840649703618E-5 0.0 0.0 11.225783932306806 0.0 14 6.210840649703618E-5 0.0 0.0 11.466950874734797 0.0 15 6.210840649703618E-5 0.0 0.0 11.760785745872274 0.0 16 6.210840649703618E-5 0.0 0.0 12.350939824407114 0.0 17 6.210840649703618E-5 0.0 0.0 13.13369207148926 0.0 18 6.210840649703618E-5 0.0 0.0 13.958678034989392 0.0 19 6.210840649703618E-5 0.0 0.0 14.584358122040534 0.0 20 6.210840649703618E-5 0.0 0.0 15.306119913942592 0.0 21 6.210840649703618E-5 0.0 0.0 16.30047550196014 0.0 22 6.210840649703618E-5 0.0 0.0 17.371907622440514 0.0 23 6.210840649703618E-5 0.0 0.0 18.326451721893463 0.0 24 6.210840649703618E-5 0.0 0.0 19.067156577777116 0.0 25 6.210840649703618E-5 0.0 0.0 19.74972796517954 0.0 26 6.210840649703618E-5 0.0 0.0 20.37640178673464 0.0 27 6.210840649703618E-5 0.0 0.0 21.07897208102911 0.0 28 6.210840649703618E-5 0.0 0.0 21.702913132698338 0.0 29 6.210840649703618E-5 0.0 0.0 22.439146183314204 0.0 30 6.210840649703618E-5 0.0 0.0 23.334128320936497 0.0 31 6.210840649703618E-5 0.0 0.0 23.992601646618073 0.0 32 6.210840649703618E-5 0.0 0.0 24.630020222497155 0.0 33 6.210840649703618E-5 0.0 0.0 25.270233676668603 0.0 34 6.210840649703618E-5 0.0 0.0 26.01031744848729 0.0 35 6.210840649703618E-5 0.0 0.0 26.75418983310229 0.0 36 6.210840649703618E-5 0.0 0.0 27.419370866685547 0.0 37 6.210840649703618E-5 0.0 0.0 28.110513214184568 0.0 38 6.210840649703618E-5 0.0 0.0 28.936430803782155 0.0 39 1.2421681299407236E-4 0.0 0.0 30.519822519017595 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACATCG 20 7.03413E-4 45.0 31 CGTTTTT 1935 0.0 40.0 1 ACGATAC 40 3.4593722E-7 39.375 45 TTTGGGC 3215 0.0 39.19129 4 TGGGCGA 1645 0.0 38.57143 6 TAACGGG 35 6.249851E-6 38.571426 3 TTTCGCG 550 0.0 38.454544 1 TTTGGGA 8710 0.0 37.766933 4 GCGATGT 370 0.0 37.7027 9 TTGGGAC 3425 0.0 37.248177 5 CTACGAA 145 0.0 37.24138 11 CGTTTGG 1205 0.0 37.157677 2 ACATACG 170 0.0 37.058823 17 TGCGTTG 280 0.0 36.964283 1 TTACGGG 305 0.0 36.885246 3 CGAACGA 55 2.750312E-9 36.81818 22 GATAACG 55 2.750312E-9 36.81818 17 TACGGGT 55 2.750312E-9 36.81818 4 TTGGGAG 4840 0.0 36.585747 5 GGGCGAT 2510 0.0 36.573704 7 >>END_MODULE