##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933941.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1932233 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.30543624914801 33.0 31.0 34.0 31.0 34.0 2 32.54385884104039 34.0 31.0 34.0 31.0 34.0 3 32.6333408031019 34.0 31.0 34.0 31.0 34.0 4 36.03030483383733 37.0 35.0 37.0 35.0 37.0 5 36.01742232950167 37.0 35.0 37.0 35.0 37.0 6 35.4681930181298 37.0 35.0 37.0 33.0 37.0 7 35.96200044197568 37.0 35.0 37.0 35.0 37.0 8 36.010553592656784 37.0 35.0 37.0 35.0 37.0 9 37.90826572157706 39.0 38.0 39.0 35.0 39.0 10 37.569221724295154 39.0 37.0 39.0 35.0 39.0 11 37.47373634546144 39.0 37.0 39.0 35.0 39.0 12 37.288123637263205 39.0 37.0 39.0 35.0 39.0 13 37.160514803338934 39.0 37.0 39.0 34.0 39.0 14 38.082504542671614 40.0 38.0 41.0 33.0 41.0 15 38.23378339982808 40.0 38.0 41.0 33.0 41.0 16 38.37241730164013 40.0 38.0 41.0 34.0 41.0 17 38.402842203812895 40.0 38.0 41.0 34.0 41.0 18 38.34475604132628 40.0 37.0 41.0 34.0 41.0 19 38.38729852973218 40.0 37.0 41.0 34.0 41.0 20 38.31795596079769 40.0 37.0 41.0 34.0 41.0 21 38.22555871885016 40.0 37.0 41.0 34.0 41.0 22 38.29251596468956 40.0 37.0 41.0 34.0 41.0 23 38.232453332491474 40.0 37.0 41.0 34.0 41.0 24 38.20220439253444 40.0 37.0 41.0 34.0 41.0 25 38.12050772344743 40.0 37.0 41.0 34.0 41.0 26 38.06272638962278 40.0 37.0 41.0 34.0 41.0 27 38.05347129461095 40.0 36.0 41.0 34.0 41.0 28 37.95844548768187 40.0 36.0 41.0 34.0 41.0 29 37.937779760515426 40.0 36.0 41.0 34.0 41.0 30 37.863358611513206 40.0 36.0 41.0 34.0 41.0 31 37.79765121494147 40.0 36.0 41.0 33.0 41.0 32 37.69878477388597 40.0 36.0 41.0 33.0 41.0 33 37.66345621878935 40.0 36.0 41.0 33.0 41.0 34 37.59793099486449 40.0 36.0 41.0 33.0 41.0 35 37.511057413883314 40.0 36.0 41.0 33.0 41.0 36 37.39435927240659 39.0 35.0 41.0 33.0 41.0 37 37.28678684195953 39.0 35.0 41.0 32.0 41.0 38 37.246894137508264 39.0 35.0 41.0 32.0 41.0 39 37.25102510929065 39.0 35.0 41.0 32.0 41.0 40 37.16806927528926 39.0 35.0 41.0 32.0 41.0 41 37.058762581945345 39.0 35.0 41.0 32.0 41.0 42 37.047474088269894 39.0 35.0 41.0 32.0 41.0 43 36.92618229789058 39.0 35.0 41.0 32.0 41.0 44 36.812384427757934 39.0 35.0 41.0 31.0 41.0 45 36.824091607999655 39.0 35.0 41.0 32.0 41.0 46 36.793925991327136 39.0 35.0 41.0 32.0 41.0 47 36.70856723800908 39.0 35.0 40.0 31.0 41.0 48 36.664182839233156 39.0 35.0 40.0 31.0 41.0 49 36.67048797945176 39.0 35.0 40.0 31.0 41.0 50 36.57783145200398 39.0 35.0 40.0 31.0 41.0 51 35.59182355337063 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 24.0 10 42.0 11 42.0 12 28.0 13 17.0 14 26.0 15 59.0 16 90.0 17 145.0 18 290.0 19 497.0 20 904.0 21 1534.0 22 2188.0 23 3368.0 24 4910.0 25 7093.0 26 10007.0 27 12652.0 28 15350.0 29 18856.0 30 24292.0 31 31963.0 32 43585.0 33 66744.0 34 131640.0 35 133483.0 36 136934.0 37 224665.0 38 433868.0 39 626608.0 40 320.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.15923338437963 4.313558458012051 52.3649063027078 15.162301854900523 2 18.49523323532928 3.9444000801145616 50.82451236470964 26.73585431984652 3 19.31785659389939 3.7556029733474174 56.12464956348432 20.80189086926887 4 18.25628689707711 4.201408422276195 48.80798537236451 28.73431930828218 5 17.49012670832141 10.756984276740953 48.0106695207048 23.742219494232838 6 20.705370418577886 10.9180414577331 50.073153703512986 18.303434420176036 7 77.84977277585054 1.8736870760410367 9.30943628434045 10.967103863767983 8 78.37760766946843 2.3605331241108085 13.418102268204715 5.843756938216043 9 73.3739150506176 4.729243315894097 15.7766687557867 6.120172877701602 10 42.257377862814685 28.862512957805812 16.196545654690713 12.683563524688793 11 27.54755767032237 27.1689283849308 26.577333064904696 18.70618087984213 12 26.103114893493697 19.008939398095364 29.7444976873907 25.143448021020237 13 25.119434353931435 19.920268414834027 30.76456100273621 24.195736228498323 14 19.567050143538587 21.965104622475653 32.84039761250325 25.627447621482503 15 17.932775188085497 21.5537153128013 38.99783307706679 21.515676422046408 16 26.073408331189874 22.2917215470391 30.26327570225744 21.37159441951359 17 23.327362693836612 22.322359674014468 27.28242401408112 27.0678536180678 18 23.002350130651944 25.593549018156715 30.432354690143477 20.971746161047868 19 22.337368215944974 24.03198786067726 32.14513984597095 21.485504077406816 20 22.20570707569946 27.503515362795273 32.39966401567513 17.891113545830134 21 22.109393639379928 29.02626132562688 30.636005078062535 18.228339956930657 22 24.25778878634202 23.143378671205802 30.689880568233747 21.90895197421843 23 20.45923033091765 26.487126552543096 30.728126473360096 22.32551664317916 24 21.493836405857884 28.51576388561835 27.331382912930273 22.65901679559349 25 21.515417654082093 27.30592014524128 24.985030273264144 26.19363192741248 26 19.934241884907255 24.620322704352944 30.36621359846354 25.079221812276266 27 20.331761231694106 22.215850779900766 33.94321492283798 23.509173065567143 28 21.065937700059983 23.912074786011832 29.979148477435174 25.04283903649301 29 19.998261079279775 27.06500717046029 29.193787705727004 23.742944044532933 30 22.116794403159453 25.384412749394098 30.94647488165247 21.55231796579398 31 24.451502484431227 24.43307820537171 28.487609931100444 22.627809379096618 32 23.752363198434143 28.594791621921374 25.092833007199445 22.56001217244504 33 23.582611413840876 23.348633420503635 27.597499887435934 25.47125527821955 34 21.645370925763093 23.035265415713322 30.540209177671635 24.779154480851947 35 23.43821888975087 26.741133186318628 27.105633740858377 22.715014183072125 36 24.523077703361864 24.507810393467043 29.522267759633543 21.446844143537554 37 22.044649894707316 27.92390979762793 28.084915225027206 21.94652508263755 38 21.728487195902357 29.193839459319864 26.25734060022782 22.820332744549958 39 22.380478958800516 24.907296376782718 28.405166457668408 24.30705820674836 40 21.739510711182348 22.360916100698 32.17448413312473 23.72508905499492 41 20.969417249368995 25.282613432231 26.820419690585968 26.927549627814034 42 22.534187129606007 22.221802443080104 28.133046066390545 27.110964360923344 43 23.287201905774303 22.4578505801319 29.628983668118703 24.625963845975097 44 23.2601865302994 21.36031213626928 29.340302127124417 26.0391992063069 45 22.389846359108866 21.855387005604396 28.074875028011633 27.679891607275103 46 22.78151754990211 21.154643358228537 30.962311481068795 25.101527610800563 47 19.885231232465237 22.571449716467942 33.799753963419526 23.743565087647298 48 19.11648336406634 24.288219898945933 31.559547942717053 25.035748794270667 49 23.790557349967628 21.963552014689743 30.77641257550202 23.46947805984061 50 20.58861431307715 21.29836308561131 31.545781487015283 26.56724111429626 51 20.459747866846286 21.925099095191936 26.94773352903092 30.66741950893086 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 344.0 1 1176.0 2 2008.0 3 4324.5 4 6641.0 5 4397.0 6 2153.0 7 2310.0 8 2467.0 9 2627.5 10 2788.0 11 2817.5 12 2847.0 13 2947.0 14 3047.0 15 2911.0 16 2775.0 17 2867.0 18 2959.0 19 2934.0 20 2909.0 21 3475.0 22 4041.0 23 5119.0 24 6197.0 25 7680.5 26 12067.0 27 14970.0 28 16705.0 29 18440.0 30 30897.5 31 43355.0 32 39360.0 33 35365.0 34 39172.5 35 42980.0 36 46219.5 37 49459.0 38 63714.5 39 77970.0 40 82105.0 41 86240.0 42 90787.5 43 95335.0 44 109355.5 45 123376.0 46 157687.0 47 191998.0 48 223434.0 49 254870.0 50 248773.5 51 242677.0 52 199402.5 53 156128.0 54 135072.5 55 114017.0 56 99944.0 57 85871.0 58 76112.5 59 66354.0 60 58995.0 61 51636.0 62 48130.5 63 44625.0 64 38730.0 65 32835.0 66 27926.0 67 23017.0 68 17867.0 69 12717.0 70 10077.0 71 7437.0 72 6100.5 73 4764.0 74 3689.0 75 1990.0 76 1366.0 77 1082.5 78 799.0 79 568.5 80 338.0 81 282.5 82 227.0 83 135.5 84 44.0 85 40.0 86 36.0 87 31.0 88 26.0 89 15.0 90 4.0 91 3.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1932233.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.843777449088606 #Duplication Level Percentage of deduplicated Percentage of total 1 64.96023460689679 17.437780808281218 2 13.798649581755424 7.408157569412044 3 6.024082081487914 4.8512735619151215 4 3.2221068156890693 3.4597407311019577 5 1.9223030506377299 2.580093764051167 6 1.282811946432254 2.0661311039435764 7 0.9281030537112804 1.74396542765516 8 0.6635419375246351 1.424957767923869 9 0.555681696963387 1.342493622523535 >10 6.233236435678469 37.63864028156178 >50 0.30418752924054726 5.190319506821147 >100 0.09163684021755922 4.685195406744129 >500 0.006614933449379569 1.2504047600169481 >1k 0.0046693647877973435 2.732538110803055 >5k 0.0011673411969493359 2.4995560861419737 >10k+ 9.727843307911131E-4 3.6887514911033765 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 19272 0.9973952416711649 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACCTGTCTCTT 16680 0.8632499289681939 No Hit CCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTCTGC 12879 0.6665345224928877 No Hit CTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTCTGCT 11379 0.5889041331971868 No Hit GCTCAACTTGACCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATG 10420 0.5392724376408021 No Hit GCTCAACTTGACCCCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTA 9675 0.5007160109572707 No Hit GCTCAACTTGACCCTGCATTAGAACTGTCTCTTATACACATCTGACGCGTG 9606 0.4971450130496684 No Hit GCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTCTGC 8717 0.45113606899374975 No Hit TCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTCTGC 8294 0.42924429921236207 No Hit GCTCAACCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTC 5882 0.30441463322487505 No Hit GCTCCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTC 5686 0.2942709290235701 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACCTGTCTCTTATACACATC 4766 0.24665762358887358 No Hit GCCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTCTG 4087 0.21151693403435298 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3955 0.20468545977633132 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGCTGTCTCTTATACACATCTG 3445 0.178291127415793 No Hit CGCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTCTG 3323 0.17197718908640935 No Hit GCTCAACTTGACCCTGCATCTGTCTCTTATACACATCTGACGCGTGATCAG 3139 0.16245452799947005 No Hit TCCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTCTG 2977 0.15407044595553435 No Hit GCTCAACTTCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCG 2820 0.14594513187591765 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCC 2480 0.12834891030222548 No Hit GCTCAACTCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGT 2407 0.12457089802316802 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0701437145520234E-4 0.0 0.0 0.6151432047791338 0.0 2 2.0701437145520234E-4 0.0 0.0 2.2777273755287277 0.0 3 2.0701437145520234E-4 0.0 0.0 3.2756401531285304 0.0 4 2.0701437145520234E-4 0.0 0.0 4.222420380978899 0.0 5 2.0701437145520234E-4 0.0 0.0 5.989805577277688 0.0 6 2.5876796431900293E-4 0.0 0.0 6.867546512247746 0.0 7 2.5876796431900293E-4 0.0 0.0 7.731417484330306 0.0 8 2.5876796431900293E-4 0.0 0.0 9.392138525736803 0.0 9 2.5876796431900293E-4 0.0 0.0 10.136510451896847 0.0 10 2.5876796431900293E-4 0.0 0.0 11.540274904734574 0.0 11 2.5876796431900293E-4 0.0 0.0 14.149173520998762 0.0 12 2.5876796431900293E-4 0.0 0.0 16.52497395500439 0.0 13 2.5876796431900293E-4 0.0 0.0 17.89225212487314 0.0 14 2.5876796431900293E-4 0.0 0.0 18.17456797394517 0.0 15 2.5876796431900293E-4 0.0 0.0 19.121658723352724 0.0 16 2.5876796431900293E-4 0.0 0.0 19.957686262474557 0.0 17 2.5876796431900293E-4 0.0 0.0 21.116914989030825 0.0 18 2.5876796431900293E-4 0.0 0.0 22.340939213852575 0.0 19 3.1052155718280355E-4 0.0 0.0 23.35375702619715 0.0 20 3.1052155718280355E-4 0.0 0.0 24.67010966068792 0.0 21 3.1052155718280355E-4 0.0 0.0 26.202274777420737 0.0 22 3.1052155718280355E-4 0.0 0.0 27.78329528581698 0.0 23 3.1052155718280355E-4 0.0 0.0 29.227324033902743 0.0 24 3.1052155718280355E-4 0.0 0.0 30.313062658592415 0.0 25 3.1052155718280355E-4 0.0 0.0 31.788609344732233 0.0 26 3.1052155718280355E-4 0.0 0.0 32.644096234770856 0.0 27 3.622751500466041E-4 0.0 0.0 33.57022677906857 0.0 28 3.622751500466041E-4 0.0 0.0 34.4152594433487 0.0 29 3.622751500466041E-4 0.0 0.0 35.37130356432169 0.0 30 3.622751500466041E-4 0.0 0.0 36.4022351341686 0.0 31 3.622751500466041E-4 0.0 0.0 37.25539311252835 0.0 32 4.140287429104047E-4 0.0 0.0 38.29569208268361 0.0 33 4.140287429104047E-4 0.0 0.0 39.09797627925825 0.0 34 4.140287429104047E-4 0.0 0.0 40.260568989350666 0.0 35 4.140287429104047E-4 0.0 0.0 41.14860888930062 0.0 36 4.140287429104047E-4 0.0 0.0 41.96398674486979 0.0 37 4.140287429104047E-4 0.0 0.0 42.812021117536034 0.0 38 4.140287429104047E-4 0.0 0.0 43.78519567774694 0.0 39 4.140287429104047E-4 0.0 0.0 45.53343204468612 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGCTAG 20 7.034481E-4 45.0 1 CCGGTAT 20 7.034481E-4 45.0 42 CGTCATA 25 3.891797E-5 45.0 38 ACTTGAC 9515 0.0 43.58119 6 TTGACCC 8930 0.0 43.56383 8 GCTCAAC 10580 0.0 43.51134 1 ACCCTGC 7935 0.0 43.412098 11 GCATTAG 7530 0.0 43.35657 16 CTCAACT 10065 0.0 43.3234 2 CTTGACC 10225 0.0 43.305626 7 TCAACTT 9830 0.0 43.237534 3 TGCATTA 7565 0.0 42.977528 15 AACTTGA 9610 0.0 42.939648 5 CAACTTG 9715 0.0 42.799793 4 CCTGCAT 7975 0.0 42.771156 13 CATTAGA 7360 0.0 42.768345 17 CCCTGCA 8080 0.0 42.577354 12 TGACCCT 8050 0.0 42.45652 9 ATTAGAA 7405 0.0 42.3869 18 CTGCATT 7935 0.0 41.20038 14 >>END_MODULE