##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933938.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 351290 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.31384326340061 33.0 31.0 34.0 31.0 34.0 2 32.541128412422786 34.0 31.0 34.0 31.0 34.0 3 32.6003928378263 34.0 31.0 34.0 31.0 34.0 4 36.01579891257935 37.0 35.0 37.0 35.0 37.0 5 36.06502604685588 37.0 35.0 37.0 35.0 37.0 6 35.748879842864866 37.0 35.0 37.0 35.0 37.0 7 36.07852771214666 37.0 35.0 37.0 35.0 37.0 8 36.07619630504711 37.0 36.0 37.0 35.0 37.0 9 37.88401036180933 39.0 38.0 39.0 35.0 39.0 10 37.506923055025766 39.0 37.0 39.0 35.0 39.0 11 37.5625209940505 39.0 37.0 39.0 35.0 39.0 12 37.34451592701187 39.0 37.0 39.0 35.0 39.0 13 37.16681943693245 39.0 37.0 39.0 34.0 39.0 14 38.34930399385124 40.0 38.0 41.0 34.0 41.0 15 38.40973554612998 40.0 38.0 41.0 34.0 41.0 16 38.46578894930115 40.0 38.0 41.0 34.0 41.0 17 38.454536138233365 40.0 38.0 41.0 34.0 41.0 18 38.44574568020724 40.0 37.0 41.0 34.0 41.0 19 38.48444305274844 40.0 37.0 41.0 34.0 41.0 20 38.419206353724846 40.0 37.0 41.0 34.0 41.0 21 38.319311679808706 40.0 37.0 41.0 34.0 41.0 22 38.33459534857241 40.0 37.0 41.0 34.0 41.0 23 38.27860172507045 40.0 37.0 41.0 34.0 41.0 24 38.258438896638104 40.0 37.0 41.0 34.0 41.0 25 38.1878448005921 40.0 37.0 41.0 34.0 41.0 26 38.143465512824164 40.0 37.0 41.0 34.0 41.0 27 38.14616129124086 40.0 37.0 41.0 34.0 41.0 28 38.062418514617555 40.0 37.0 41.0 34.0 41.0 29 37.968664066725495 40.0 36.0 41.0 34.0 41.0 30 37.909140596088704 40.0 36.0 41.0 34.0 41.0 31 37.87028096444533 40.0 36.0 41.0 34.0 41.0 32 37.731239147143384 40.0 36.0 41.0 33.0 41.0 33 37.65864670215492 40.0 36.0 41.0 33.0 41.0 34 37.69838025562925 40.0 36.0 41.0 33.0 41.0 35 37.63241196732045 40.0 36.0 41.0 33.0 41.0 36 37.550587833413985 40.0 36.0 41.0 33.0 41.0 37 37.45320390560506 39.0 36.0 41.0 33.0 41.0 38 37.31812462637707 39.0 35.0 41.0 32.0 41.0 39 37.277426058242476 39.0 35.0 41.0 32.0 41.0 40 37.32812491104216 39.0 35.0 41.0 33.0 41.0 41 37.31058384810271 39.0 35.0 41.0 33.0 41.0 42 37.28896353440177 39.0 35.0 41.0 33.0 41.0 43 37.11273306954368 39.0 35.0 41.0 32.0 41.0 44 36.956580033590484 39.0 35.0 41.0 32.0 41.0 45 36.94047083606137 39.0 35.0 41.0 31.0 41.0 46 36.901212673289876 39.0 35.0 41.0 31.0 41.0 47 36.84673916137664 39.0 35.0 41.0 31.0 41.0 48 36.784072988129466 39.0 35.0 41.0 31.0 41.0 49 36.79268410714794 39.0 35.0 40.0 31.0 41.0 50 36.7009564747075 39.0 35.0 40.0 31.0 41.0 51 35.73051325116001 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 5.0 11 4.0 12 5.0 13 4.0 14 6.0 15 7.0 16 6.0 17 18.0 18 36.0 19 62.0 20 114.0 21 220.0 22 352.0 23 529.0 24 752.0 25 1143.0 26 1687.0 27 2129.0 28 2588.0 29 3222.0 30 3996.0 31 5441.0 32 7397.0 33 10399.0 34 19463.0 35 30409.0 36 25214.0 37 40712.0 38 81282.0 39 114004.0 40 80.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.080617153918414 4.608443166614478 56.19630504711207 17.114634632355035 2 19.002248854223005 4.033989011927468 54.56745139343562 22.396310740413902 3 19.270403370434682 4.024879728998833 54.90278687124598 21.801930029320506 4 19.236243559452305 3.8557886646360555 53.01545731446953 23.89251046144211 5 18.05573742491958 5.468701073187395 51.8679723305531 24.60758917133992 6 20.34529875601355 5.578012468331008 53.975917333257414 20.10077144239802 7 82.10509835178912 1.3834723447863588 10.947650089669505 5.5637792137550175 8 82.86373082068947 2.0962737339520054 8.233653107119473 6.8063423382390615 9 75.86353155512539 6.257792706880355 11.467733211876228 6.410942526118022 10 29.21546300777136 40.549972956816305 17.00418457684534 13.230379458566995 11 27.21398274929545 25.25064761308321 29.713911583022572 17.821458054598764 12 25.81741581029918 21.94141592416522 31.59810982379231 20.64305844174329 13 21.544308121495064 26.72122747587463 34.0832360727604 17.65122832986991 14 17.91055822824447 29.321358421816733 31.74499701101654 21.02308633892226 15 15.143898203763273 26.08443166614478 38.98602294400638 19.78564718608557 16 16.010988072532665 26.322411682655357 33.50707392752427 24.15952631728771 17 16.192604400922313 24.78806683936349 30.683196219647584 28.33613254006661 18 18.7824874035697 23.35335477810356 34.99046371943408 22.873694098892653 19 20.73842124740243 24.53727689373452 31.85373907597711 22.870562782885933 20 23.019442625750806 26.18207179253608 31.79424407184947 19.004241509863647 21 21.859717042899028 27.674286202283017 31.992086310455747 18.473910444362208 22 20.158273790885023 24.454724017193772 30.103048763130175 25.28395342879103 23 18.68000797062256 26.288821201856017 29.19240513535825 25.838765692163168 24 20.13265393264824 24.594209912038487 30.62398588061146 24.649150274701814 25 17.86131116741154 26.932733638873863 28.40644481767201 26.799510376042583 26 16.7135415184036 28.77992541774602 28.09359788209172 26.412935181758662 27 20.80588687409263 27.165305018645565 28.927666600244812 23.101141507016994 28 18.531412792849213 24.754761023655668 32.90358393350223 23.810242249992882 29 18.74889692277036 22.41538330154573 33.49084801730764 25.344871758376268 30 21.351589854536137 24.485467847077913 32.46263770673802 21.700304591647924 31 24.18998548208033 25.587121751259644 28.876711548862765 21.346181217797263 32 24.158672322013153 24.894816248683423 28.653249452019697 22.293261977283727 33 23.046201144353667 23.177431751544308 31.149762304648583 22.626604799453442 34 20.548264966267187 21.732187081898147 32.54376725782117 25.175780694013493 35 20.19641891314868 21.471718523157506 31.16741154032281 27.164451023371004 36 25.32437587178684 22.03962538073956 31.0193856927325 21.616613054741094 37 23.511059238805547 23.160921176236158 33.54066440832361 19.787355176634687 38 21.054684164080957 26.015258048905466 31.58102991830112 21.349027868712458 39 19.494150132369267 23.50451194170059 36.55669105297618 20.44464687295397 40 22.64624669076831 21.6151897292835 33.526146488656096 22.212417091292096 41 20.308007629024452 21.754106293945174 30.182185658572692 27.755700418457685 42 24.14301574197956 19.682883088046914 29.482478863616958 26.69162230635657 43 24.22841526943551 19.987759401064647 30.85798058584076 24.925844743659084 44 21.49335307011301 21.25024908195508 31.163426229041534 26.092971618890378 45 20.684050214922145 21.573059295738563 30.518375131657606 27.22451535768169 46 23.605852714281646 21.628568988584927 32.66104927552734 22.10452902160608 47 19.848842836402973 21.49335307011301 35.233567707592016 23.424236385891998 48 20.470551396282275 20.0330211506163 34.667368840559085 24.829058612542344 49 21.618890375473256 17.342082040479376 38.00506703862905 23.033960545418317 50 21.79196675111731 19.409889265279396 33.59645876626149 25.201685217341797 51 20.36237866150474 18.607987702468044 30.391414500839765 30.638219135187448 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 37.0 1 126.0 2 215.0 3 657.0 4 1099.0 5 721.5 6 344.0 7 407.5 8 471.0 9 541.0 10 611.0 11 674.0 12 737.0 13 793.0 14 849.0 15 850.5 16 852.0 17 895.0 18 938.0 19 841.5 20 745.0 21 956.0 22 1167.0 23 1224.5 24 1282.0 25 1455.5 26 2497.5 27 3366.0 28 4126.5 29 4887.0 30 5007.0 31 5127.0 32 6056.0 33 6985.0 34 7982.0 35 8979.0 36 9950.0 37 10921.0 38 11603.5 39 12286.0 40 14426.5 41 16567.0 42 20705.5 43 24844.0 44 27904.5 45 30965.0 46 36125.5 47 41286.0 48 46313.0 49 51340.0 50 47987.0 51 44634.0 52 35358.5 53 26083.0 54 21223.0 55 16363.0 56 13617.0 57 10871.0 58 9514.0 59 8157.0 60 7444.5 61 6732.0 62 5336.0 63 3940.0 64 3266.0 65 2592.0 66 2020.5 67 1449.0 68 1146.0 69 843.0 70 692.0 71 541.0 72 388.5 73 236.0 74 168.5 75 115.5 76 130.0 77 95.5 78 61.0 79 40.5 80 20.0 81 12.5 82 5.0 83 3.0 84 1.0 85 1.0 86 1.0 87 1.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 351290.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.542731044111814 #Duplication Level Percentage of deduplicated Percentage of total 1 64.31246851593976 18.999659601493175 2 14.957717771254622 8.837836662998138 3 6.404316981249599 5.676030422948849 4 3.302004304043493 3.9020090024342617 5 1.9114325275717936 2.823446853551017 6 1.2077772209935127 2.1408622560609687 7 0.8500204591251905 1.757834806414956 8 0.6387601371939793 1.5096575147857356 9 0.4434449387334209 1.1790517102086684 >10 5.577440987020963 38.9513923933731 >50 0.2969586231018942 5.387721503097811 >100 0.08769247930525735 4.217796075344644 >500 0.004982527233253259 0.958255477437483 >1k 0.004982527233253259 3.6584457198511835 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC 3413 0.9715619573571693 No Hit CTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGCT 2889 0.82239744940078 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC 2743 0.7808363460388853 No Hit GCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC 2312 0.6581456915938398 No Hit TCCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTG 1070 0.30459164792621485 No Hit CGCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTG 748 0.21292948845683052 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 660 0.18787896040308577 No Hit TTCCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCT 633 0.18019300293205043 No Hit TGCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTG 624 0.177631017108372 No Hit GCCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTG 590 0.1679524039966979 No Hit TTCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTG 469 0.13350792792279884 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.846650915198269E-4 0.0 0.0 0.8574112556577187 0.0 2 2.846650915198269E-4 0.0 0.0 3.4464402630305444 0.0 3 2.846650915198269E-4 0.0 0.0 4.861510432975604 0.0 4 2.846650915198269E-4 0.0 0.0 6.2355888297418085 0.0 5 2.846650915198269E-4 0.0 0.0 8.414130775143045 0.0 6 2.846650915198269E-4 0.0 0.0 9.668649833470921 0.0 7 2.846650915198269E-4 0.0 0.0 10.799908907170714 0.0 8 2.846650915198269E-4 0.0 0.0 12.740755501152893 0.0 9 2.846650915198269E-4 0.0 0.0 13.660793076944975 0.0 10 2.846650915198269E-4 0.0 0.0 15.497167582339378 0.0 11 2.846650915198269E-4 0.0 0.0 18.295994762162316 0.0 12 2.846650915198269E-4 0.0 0.0 21.00059779669219 0.0 13 2.846650915198269E-4 0.0 0.0 21.85772438725839 0.0 14 2.846650915198269E-4 0.0 0.0 22.148652110791655 0.0 15 2.846650915198269E-4 0.0 0.0 22.58362037063395 0.0 16 2.846650915198269E-4 0.0 0.0 23.68612827009024 0.0 17 2.846650915198269E-4 0.0 0.0 25.382447550456888 0.0 18 2.846650915198269E-4 0.0 0.0 27.449970110165392 0.0 19 2.846650915198269E-4 0.0 0.0 28.533974778672892 0.0 20 5.693301830396538E-4 0.0 0.0 29.811267044322356 0.0 21 5.693301830396538E-4 0.0 0.0 31.31401406245552 0.0 22 5.693301830396538E-4 0.0 0.0 32.73677018987161 0.0 23 5.693301830396538E-4 0.0 0.0 34.119103874291895 0.0 24 5.693301830396538E-4 0.0 0.0 35.09493580802186 0.0 25 8.539952745594808E-4 0.0 0.0 35.90196134248057 0.0 26 8.539952745594808E-4 0.0 0.0 36.69816960346153 0.0 27 8.539952745594808E-4 0.0 0.0 37.43118221412508 0.0 28 8.539952745594808E-4 0.0 0.0 38.26553559736969 0.0 29 0.0011386603660793076 0.0 0.0 39.104158956987106 0.0 30 0.0011386603660793076 0.0 0.0 40.09393948020154 0.0 31 0.0011386603660793076 0.0 0.0 40.91292094850409 0.0 32 0.0011386603660793076 0.0 0.0 41.69461128981753 0.0 33 0.0011386603660793076 0.0 0.0 42.42193059865069 0.0 34 0.0011386603660793076 0.0 0.0 43.192234336303336 0.0 35 0.0011386603660793076 0.0 0.0 44.025449059181874 0.0 36 0.0011386603660793076 0.0 0.0 44.74508241054399 0.0 37 0.0011386603660793076 0.0 0.0 45.47809502120755 0.0 38 0.0011386603660793076 0.0 0.0 46.23274217882661 0.0 39 0.0011386603660793076 0.0 0.0 46.994221298642145 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGGG 30 2.1611831E-6 45.000004 3 CGGAATA 20 7.0265896E-4 45.000004 6 CGTGGCA 25 3.8852555E-5 45.000004 15 CGTGGAG 20 7.0265896E-4 45.000004 12 TCGTTTG 50 2.1827873E-11 45.000004 1 TAATACA 20 7.0265896E-4 45.000004 18 CAAACCC 20 7.0265896E-4 45.000004 24 ACACGAC 25 3.8852555E-5 45.000004 26 CGACGGC 25 3.8852555E-5 45.000004 36 ACGTTCC 20 7.0265896E-4 45.000004 36 GCGCGAC 20 7.0265896E-4 45.000004 9 CGTGAGG 20 7.0265896E-4 45.000004 45 CGGTTGG 40 6.7921064E-9 45.000004 2 GCACGTG 25 3.8852555E-5 45.000004 12 CGACCAA 30 2.1611831E-6 45.000004 29 TTCGTAG 20 7.0265896E-4 45.000004 1 CGCGACC 20 7.0265896E-4 45.000004 10 TAGCCGC 20 7.0265896E-4 45.000004 14 GCCGCGG 20 7.0265896E-4 45.000004 1 ATCGTCA 30 2.1611831E-6 45.000004 40 >>END_MODULE