##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933937.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1179174 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.2453547992069 33.0 31.0 34.0 30.0 34.0 2 32.44221633109278 34.0 31.0 34.0 30.0 34.0 3 32.51816186584847 34.0 31.0 34.0 30.0 34.0 4 35.9728258933796 37.0 35.0 37.0 35.0 37.0 5 36.00605423796657 37.0 35.0 37.0 35.0 37.0 6 35.53324700171476 37.0 35.0 37.0 33.0 37.0 7 35.950947866896655 37.0 35.0 37.0 35.0 37.0 8 35.90597740452215 37.0 35.0 37.0 35.0 37.0 9 37.82687372686304 39.0 38.0 39.0 35.0 39.0 10 37.400986622839376 39.0 37.0 39.0 35.0 39.0 11 37.34435206339353 39.0 37.0 39.0 34.0 39.0 12 37.31956776523227 39.0 37.0 39.0 34.0 39.0 13 37.27328027924632 39.0 37.0 39.0 34.0 39.0 14 38.51208133829274 40.0 38.0 41.0 34.0 41.0 15 38.495385753078004 40.0 38.0 41.0 34.0 41.0 16 38.60120898188054 40.0 38.0 41.0 34.0 41.0 17 38.51252062884697 40.0 38.0 41.0 34.0 41.0 18 38.483738617031925 40.0 38.0 41.0 34.0 41.0 19 38.47837214863964 40.0 38.0 41.0 34.0 41.0 20 38.36455434058078 40.0 38.0 41.0 34.0 41.0 21 38.34745253881107 40.0 38.0 41.0 34.0 41.0 22 38.37710041096564 40.0 38.0 41.0 34.0 41.0 23 38.27539277494246 40.0 37.0 41.0 34.0 41.0 24 38.2381412751638 40.0 37.0 41.0 34.0 41.0 25 38.165320809312284 40.0 37.0 41.0 34.0 41.0 26 38.09939160802392 40.0 37.0 41.0 34.0 41.0 27 38.10351652936717 40.0 37.0 41.0 34.0 41.0 28 38.040211198686535 40.0 37.0 41.0 34.0 41.0 29 38.00351178028009 40.0 37.0 41.0 34.0 41.0 30 37.959659049470226 40.0 37.0 41.0 33.0 41.0 31 37.89189466524873 40.0 37.0 41.0 33.0 41.0 32 37.71671356390151 40.0 37.0 41.0 33.0 41.0 33 37.68531870614515 40.0 37.0 41.0 33.0 41.0 34 37.60760583255737 40.0 37.0 41.0 33.0 41.0 35 37.55766578978166 40.0 37.0 41.0 33.0 41.0 36 37.50329976746434 40.0 37.0 41.0 33.0 41.0 37 37.4479440693231 40.0 37.0 41.0 33.0 41.0 38 37.36880986181853 40.0 36.0 41.0 32.0 41.0 39 37.339640290576284 40.0 36.0 41.0 33.0 41.0 40 37.21396163755307 40.0 36.0 41.0 32.0 41.0 41 37.14270073797421 39.0 36.0 41.0 32.0 41.0 42 37.13009191179589 39.0 36.0 41.0 32.0 41.0 43 37.089140364356744 39.0 36.0 41.0 32.0 41.0 44 37.03032800926751 39.0 36.0 41.0 31.0 41.0 45 37.0460067810179 39.0 36.0 41.0 32.0 41.0 46 36.952264890508104 39.0 35.0 41.0 31.0 41.0 47 36.796333704779784 39.0 35.0 41.0 31.0 41.0 48 36.794586719178 39.0 35.0 41.0 31.0 41.0 49 36.842105575597834 39.0 35.0 41.0 31.0 41.0 50 36.7593281398674 39.0 35.0 41.0 31.0 41.0 51 35.833784496605254 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 9.0 10 15.0 11 9.0 12 11.0 13 12.0 14 10.0 15 25.0 16 28.0 17 66.0 18 126.0 19 290.0 20 654.0 21 1137.0 22 1935.0 23 2786.0 24 3899.0 25 5523.0 26 7358.0 27 8567.0 28 9700.0 29 11283.0 30 14248.0 31 18650.0 32 24915.0 33 34648.0 34 56996.0 35 76955.0 36 87643.0 37 139510.0 38 272455.0 39 399522.0 40 186.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.065640863858935 4.1719881883420085 55.402425765832696 13.35994518196636 2 17.871493096014667 9.617918983966742 51.62232206612425 20.888265853894335 3 17.856058563028018 9.50614582750298 51.244176007951324 21.39361960151767 4 17.01988001770731 3.971932895399661 55.877673693619435 23.130513393273596 5 21.017169645870755 4.936336791686384 50.620179888633906 23.426313673808956 6 19.146877390444498 9.277087181365939 53.540868438415366 18.035166989774197 7 78.5061407391954 1.3431435903437492 14.929688069784442 5.221027600676406 8 79.27506881936 5.393351617318563 9.32093143166318 6.010648131658263 9 74.56058223807513 3.89747399450802 11.320297089318455 10.221646678098399 10 35.65572171706635 26.34751105434821 21.17312627313696 16.823640955448475 11 25.099688425965972 24.547352638372285 28.853756951900227 21.499201983761516 12 21.55067869542578 21.045833778560247 33.70096355584503 23.702523970168947 13 21.74768100382132 23.20522670954414 36.49190026238706 18.555192024247482 14 20.309131646389762 26.433333842164092 31.301148091799853 21.956386419646297 15 16.24789895299591 26.049845061034247 36.58145447576015 21.120801510209688 16 17.82256053813941 25.47647760211809 31.44183979633201 25.259122063410487 17 17.988100144677546 26.546972711406458 30.800713041501933 24.66421410241406 18 19.157647641484633 25.08908778517844 32.03250750101342 23.720757072323508 19 20.279110631679465 27.773678863339928 29.402191703684107 22.5450188012965 20 22.04789115092429 26.63101459157003 31.923617718843865 19.39747653866181 21 22.009389623583967 29.177882144619876 29.625059575601227 19.18766865619493 22 20.021218242600327 24.707719132206105 29.406516765125417 25.86454586006815 23 19.38272044668556 27.6709798553903 28.92253390932975 24.02376578859439 24 21.199500667416345 24.748849618461737 28.73341847768014 25.31823123644178 25 18.5602803318255 29.975304747221358 26.329108341941055 25.13530657901209 26 17.478590945865495 28.570507830057313 29.198913815942344 24.751987408134845 27 19.738308341262613 27.679375562894027 28.11332339417253 24.46899270167083 28 16.34703614564093 26.628385632654723 32.75733691550187 24.26724130620248 29 18.129300679967503 26.65484483206041 29.699433671366567 25.516420816605525 30 20.11170531236272 27.111520437187387 28.929827150191574 23.846947100258316 31 18.86032086867587 28.394028362226443 27.465581839491033 25.280068929606657 32 19.11337936555589 32.994282438384836 24.7368920956534 23.15544610040588 33 19.954391803075712 26.58691592589389 24.8604531646729 28.598239106357504 34 18.074262152998624 27.93353652641595 26.87720387321973 27.114997447365695 35 16.746722705894125 28.786930512375612 25.05075586809071 29.41559091363955 36 18.333935449730067 28.49053659595615 25.990481472624055 27.185046481689724 37 15.999759153441307 28.52708760539157 29.63116554469484 25.841987696472273 38 18.38473372038393 28.78582804573371 28.081860692315132 24.747577541567235 39 20.395208849584538 26.96777574810842 27.373653082581534 25.263362319725502 40 21.36716040211199 26.06884140932551 27.630103784513565 24.933894404048935 41 16.94567553219457 27.800392478124518 25.33917810263795 29.914753887042966 42 17.61529680946154 27.871543979090447 27.424875378866904 27.088283832581112 43 19.198184491856164 25.16346188094378 27.416394866236875 28.221958760963183 44 19.023061906046095 24.799732694241904 27.990695181542335 28.18651021816967 45 19.501108403000742 23.686071775666694 27.026969726266014 29.785850095066547 46 21.675342231087185 26.01948482581875 26.92028487738027 25.384888065713795 47 16.251969599058324 25.75904828295061 32.40836382077624 25.58061829721483 48 16.94898293212028 25.902114531019173 28.89666834580817 28.252234191052384 49 18.746766804559805 23.434030940302282 32.034966849676124 25.784235405461793 50 19.791141934947685 22.413146829899574 28.493589580502963 29.30212165464978 51 18.389567612583047 22.441556547210165 25.702228848329423 33.46664699187736 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 131.0 1 448.0 2 765.0 3 3214.0 4 5663.0 5 3996.5 6 2330.0 7 2247.5 8 2165.0 9 2258.5 10 2352.0 11 2490.5 12 2629.0 13 2618.0 14 2607.0 15 2792.0 16 2977.0 17 3077.0 18 3177.0 19 3236.5 20 3296.0 21 3481.0 22 3666.0 23 4448.5 24 5231.0 25 5930.5 26 8071.5 27 9513.0 28 11471.0 29 13429.0 30 15329.5 31 17230.0 32 20013.0 33 22796.0 34 26013.5 35 29231.0 36 32595.5 37 35960.0 38 41162.0 39 46364.0 40 52189.5 41 58015.0 42 65043.5 43 72072.0 44 81871.0 45 91670.0 46 132533.0 47 173396.0 48 168899.5 49 164403.0 50 150886.5 51 137370.0 52 110007.0 53 82644.0 54 67676.0 55 52708.0 56 44546.0 57 36384.0 58 32154.5 59 27925.0 60 24994.0 61 22063.0 62 18529.5 63 14996.0 64 12254.0 65 9512.0 66 8065.5 67 6619.0 68 5468.5 69 4318.0 70 3435.0 71 2552.0 72 2390.5 73 2229.0 74 1754.0 75 817.0 76 355.0 77 300.5 78 246.0 79 184.0 80 122.0 81 101.5 82 81.0 83 65.5 84 50.0 85 34.0 86 18.0 87 10.5 88 3.0 89 2.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1179174.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.18940396081522 #Duplication Level Percentage of deduplicated Percentage of total 1 71.60670012900482 25.1979709714051 2 12.8627730923998 9.052666368095219 3 4.875261914572352 5.146726827799918 4 2.4266405146082333 3.415681333449186 5 1.471270555687658 2.588656695987304 6 0.9276000061005433 1.9585014797236011 7 0.6785432333584431 1.6714272360469578 8 0.49193898349367376 1.3848831691385355 9 0.4084245061090344 1.293499343967053 >10 4.006754645600801 30.946645640590603 >50 0.17137741210260982 3.893532349770428 >100 0.06277728939043527 4.119323204211389 >500 0.004847667108133609 1.2148318746601774 >1k 0.0033933669756935265 2.5886503823587996 >5k 9.695334216267219E-4 2.3527292305431673 >10k+ 7.271500662200413E-4 3.174273892252556 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCACTAGCACTCGTATGC 13160 1.1160354621116138 No Hit GAATCTGTCTCTTATACACATCTGACGCACTAGCACTCGTATGCCGTCTTC 12868 1.0912723652319334 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACTAGCACTCGTATGCCG 11188 0.9487997530474723 No Hit GCTGTCTCTTATACACATCTGACGCACTAGCACTCGTATGCCGTCTTCTGC 7847 0.6654658260782548 TruSeq Adapter, Index 16 (95% over 21bp) CTGTCTCTTATACACATCTGACGCACTAGCACTCGTATGCCGTCTTCTGCT 6884 0.5837984894510904 TruSeq Adapter, Index 13 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCACTAGCACTCGTATGCCGTCTTCTGC 6617 0.5611555207289171 TruSeq Adapter, Index 16 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCACTAGCACTCGTATGCCGTCTTCTGC 6236 0.5288447676085124 TruSeq Adapter, Index 16 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3166 0.26849302986666934 No Hit GAACTGTCTCTTATACACATCTGACGCACTAGCACTCGTATGCCGTCTTCT 3051 0.25874044034213783 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACTAGCACTCGTATGCCGTC 2896 0.24559564576559523 No Hit GAATGACTGTCTCTTATACACATCTGACGCACTAGCACTCGTATGCCGTCT 2788 0.23643669212516558 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACTAGCACT 2776 0.23541903060956226 No Hit TCCTGTCTCTTATACACATCTGACGCACTAGCACTCGTATGCCGTCTTCTG 2743 0.23262046144165321 No Hit CGCTGTCTCTTATACACATCTGACGCACTAGCACTCGTATGCCGTCTTCTG 2638 0.2237159231801244 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACTAGCACTCGTA 2321 0.19683269814293733 No Hit TTCCTGTCTCTTATACACATCTGACGCACTAGCACTCGTATGCCGTCTTCT 1794 0.15214039658269263 No Hit GCCTGTCTCTTATACACATCTGACGCACTAGCACTCGTATGCCGTCTTCTG 1427 0.12101691523049185 No Hit TGCTGTCTCTTATACACATCTGACGCACTAGCACTCGTATGCCGTCTTCTG 1270 0.10770251040134873 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACTAGCACTCGTATGCC 1230 0.10431030534933776 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6043213300157568 0.0 2 0.0 0.0 0.0 2.4769033238521203 0.0 3 0.0 0.0 0.0 3.564274653274241 0.0 4 0.0 0.0 0.0 4.9119129153119045 0.0 5 0.0 0.0 0.0 7.684616519699383 0.0 6 0.0 0.0 0.0 9.002997013163451 0.0 7 0.0 0.0 0.0 10.216727980772982 0.0 8 0.0 0.0 0.0 12.000519007372958 0.0 9 0.0 0.0 0.0 12.69914363783462 0.0 10 0.0 0.0 0.0 15.134238034420704 0.0 11 0.0 0.0 0.0 17.746320729595464 0.0 12 0.0 0.0 0.0 21.15184018643559 0.0 13 0.0 0.0 0.0 22.051452966228904 0.0 14 0.0 0.0 0.0 22.36828491808673 0.0 15 0.0 0.0 0.0 22.948097566601707 0.0 16 0.0 0.0 0.0 23.936586118757706 0.0 17 0.0 0.0 0.0 25.345453681984168 0.0 18 0.0 0.0 0.0 26.880087247513938 0.0 19 0.0 0.0 0.0 28.21237578169125 0.0 20 0.0 0.0 0.0 29.275153624486293 0.0 21 0.0 0.0 0.0 30.87356064499387 0.0 22 0.0 0.0 0.0 32.58967718080623 0.0 23 8.48051263002746E-5 0.0 0.0 34.36329159225017 0.0 24 8.48051263002746E-5 0.0 0.0 35.55030894507511 0.0 25 8.48051263002746E-5 0.0 0.0 36.60553913162943 0.0 26 8.48051263002746E-5 0.0 0.0 37.50074204485513 0.0 27 8.48051263002746E-5 0.0 0.0 38.4193511729397 0.0 28 8.48051263002746E-5 0.0 0.0 39.38333104359492 0.0 29 8.48051263002746E-5 0.0 0.0 40.37767114946564 0.0 30 8.48051263002746E-5 0.0 0.0 41.379558911577085 0.0 31 8.48051263002746E-5 0.0 0.0 42.37415343282671 0.0 32 8.48051263002746E-5 0.0 0.0 43.29581554545809 0.0 33 8.48051263002746E-5 0.0 0.0 44.206622601923044 0.0 34 8.48051263002746E-5 0.0 0.0 45.06697060823932 0.0 35 8.48051263002746E-5 0.0 0.0 45.944618860320865 0.0 36 8.48051263002746E-5 0.0 0.0 46.82591373283332 0.0 37 8.48051263002746E-5 0.0 0.0 47.67710278550918 0.0 38 8.48051263002746E-5 0.0 0.0 48.4852956391508 0.0 39 8.48051263002746E-5 0.0 0.0 49.276357857279756 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCCCG 20 7.033361E-4 45.0 12 ACACGCG 45 3.8562575E-10 45.0 36 TTCACGA 20 7.033361E-4 45.0 24 CTAAGCG 20 7.033361E-4 45.0 34 ATCGTGA 20 7.033361E-4 45.0 30 TTAACGC 25 3.8908674E-5 45.0 43 TTACGCG 55 1.8189894E-12 45.0 1 TGTCGAA 20 7.033361E-4 45.0 41 AGTCGAA 20 7.033361E-4 45.0 23 CGATGAA 470 0.0 42.606384 19 TCGACGT 50 1.0822987E-9 40.5 26 TCGTTCA 45 1.9283107E-8 40.0 16 ATTCGCG 45 1.9283107E-8 40.0 1 CGTTTTT 2295 0.0 39.901962 1 TGTTCCG 160 0.0 39.375 1 TCGTGCG 120 0.0 39.374996 1 ACGGCTG 1685 0.0 39.25816 8 TACGGCT 1680 0.0 39.24107 7 CGTGCGG 155 0.0 39.193546 2 CCGATGA 510 0.0 38.82353 18 >>END_MODULE