##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933935.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1466949 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.47021811937566 34.0 31.0 34.0 31.0 34.0 2 32.70171355650401 34.0 31.0 34.0 31.0 34.0 3 32.75337452085928 34.0 31.0 34.0 31.0 34.0 4 36.10616660838243 37.0 35.0 37.0 35.0 37.0 5 36.147688842625065 37.0 35.0 37.0 35.0 37.0 6 35.79543801454584 37.0 35.0 37.0 35.0 37.0 7 36.107183003635434 37.0 35.0 37.0 35.0 37.0 8 36.11818270437486 37.0 37.0 37.0 35.0 37.0 9 37.95931078721892 39.0 39.0 39.0 35.0 39.0 10 37.62051509629851 39.0 37.0 39.0 35.0 39.0 11 37.56075569089314 39.0 37.0 39.0 35.0 39.0 12 37.4558883778509 39.0 37.0 39.0 35.0 39.0 13 37.44053474251661 39.0 37.0 39.0 35.0 39.0 14 38.71226402553872 40.0 38.0 41.0 35.0 41.0 15 38.75794659528041 40.0 38.0 41.0 35.0 41.0 16 38.80396455500498 40.0 38.0 41.0 35.0 41.0 17 38.76813304348004 40.0 38.0 41.0 35.0 41.0 18 38.707053892125764 40.0 38.0 41.0 35.0 41.0 19 38.73895752340402 40.0 38.0 41.0 35.0 41.0 20 38.699682129371915 40.0 38.0 41.0 35.0 41.0 21 38.618906315079805 40.0 38.0 41.0 35.0 41.0 22 38.607881391922966 40.0 38.0 41.0 35.0 41.0 23 38.528417825023226 40.0 38.0 41.0 34.0 41.0 24 38.4952162617787 40.0 38.0 41.0 34.0 41.0 25 38.36621723045587 40.0 38.0 41.0 34.0 41.0 26 38.309601083609586 40.0 37.0 41.0 34.0 41.0 27 38.307939812495185 40.0 38.0 41.0 34.0 41.0 28 38.23230732629423 40.0 37.0 41.0 34.0 41.0 29 38.235423317375044 40.0 37.0 41.0 34.0 41.0 30 38.1908675761734 40.0 37.0 41.0 34.0 41.0 31 38.122765004100344 40.0 37.0 41.0 34.0 41.0 32 38.048941033396524 40.0 37.0 41.0 34.0 41.0 33 37.95735161890427 40.0 37.0 41.0 34.0 41.0 34 37.91635155687076 40.0 37.0 41.0 34.0 41.0 35 37.87101051229457 40.0 37.0 41.0 33.0 41.0 36 37.82713577636305 40.0 37.0 41.0 33.0 41.0 37 37.809636872174835 40.0 37.0 41.0 33.0 41.0 38 37.77767461581827 40.0 37.0 41.0 33.0 41.0 39 37.733982571991255 40.0 37.0 41.0 33.0 41.0 40 37.65719667145893 40.0 36.0 41.0 33.0 41.0 41 37.53169128579112 40.0 36.0 41.0 33.0 41.0 42 37.49111591473187 40.0 36.0 41.0 33.0 41.0 43 37.35947398307644 40.0 36.0 41.0 33.0 41.0 44 37.283485656283894 39.0 36.0 41.0 32.0 41.0 45 37.31554948399706 39.0 36.0 41.0 33.0 41.0 46 37.242516951850405 39.0 35.0 41.0 32.0 41.0 47 37.18621915281308 39.0 35.0 41.0 32.0 41.0 48 37.14423541650051 39.0 35.0 41.0 32.0 41.0 49 37.13597746070245 39.0 35.0 41.0 32.0 41.0 50 37.088494555707115 39.0 35.0 41.0 32.0 41.0 51 36.15384243078662 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 17.0 10 21.0 11 23.0 12 21.0 13 22.0 14 21.0 15 22.0 16 52.0 17 84.0 18 181.0 19 329.0 20 544.0 21 928.0 22 1453.0 23 2221.0 24 3322.0 25 4858.0 26 6935.0 27 8556.0 28 10114.0 29 12428.0 30 15495.0 31 19988.0 32 26529.0 33 38228.0 34 70439.0 35 96466.0 36 97620.0 37 157954.0 38 324221.0 39 567442.0 40 406.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.90825993269023 4.448143732331526 56.39575745305392 17.24783888192432 2 19.477977762008088 4.852043254400801 54.175162190369264 21.49481679322185 3 20.133351602543783 4.778352894340567 52.206586595716686 22.881708907398963 4 19.312600506220733 4.64290169596898 51.90057732068395 24.143920477126336 5 18.883614904130955 5.487375498398377 50.08892606355096 25.54008353391972 6 21.692437842079034 6.265043979034036 53.424352175842515 18.618166003044415 7 83.90891571554295 2.1754675861260346 8.987906191694464 4.927710506636564 8 85.67325789785465 2.8552458197251576 6.748019188124468 4.723477094295712 9 79.70767899906541 5.659842298539349 8.974545127335714 5.657933575059528 10 35.60157851431781 36.84592988576972 14.851027540834751 12.701464059077718 11 25.932394377718655 24.767664042853568 29.97132142971569 19.32862014971209 12 25.20728396147378 22.291777014742845 31.979639373965966 20.521299649817408 13 23.689985132407465 22.62859854023555 32.83658804770991 20.844828279647075 14 19.444711438502633 26.088705196976854 31.623185264109388 22.843398100411125 15 17.93620637118264 26.366628969377942 34.794392988440634 20.90277167099879 16 20.77993168133316 25.813917184578333 32.08741408188015 21.31873705220836 17 21.148587987721452 25.597277069618645 29.808261909582406 23.445873033077497 18 20.420273642778312 25.443829335580176 31.308859408200284 22.82703761344123 19 22.789544830801887 25.700143631441858 29.82591760177075 21.684393935985504 20 24.666569867118763 26.260353972769334 29.563468123295355 19.50960803681655 21 24.61748840620908 26.27657812234781 29.40115845881486 19.70477501262825 22 23.16010986067 24.086317929253166 29.519499314563763 23.23407289551307 23 21.7292489377613 25.690122833172797 29.347100683118498 23.233527545947403 24 22.474332781848585 23.719774852431815 30.04664783847291 23.759244527246686 25 20.5782205107335 26.382375938086465 28.177803045640985 24.861600505539048 26 20.160755418218358 26.935360397668905 28.549595112031845 24.3542890720809 27 19.940843205864688 26.357494364153084 30.218841963831057 23.482820466151175 28 18.100424759142957 26.130356270054378 31.42229211785822 24.346926852944446 29 19.56400665599145 23.531765589669444 31.4497641022285 25.454463652110604 30 20.499826510669422 23.778331762044896 31.11791889152247 24.603922835763207 31 20.172753108662945 26.27173814495255 28.731332854789088 24.824175891595413 32 20.156665296475886 26.41073411550095 28.504331098081803 24.928269489941368 33 20.507393235892998 25.677920636641083 28.86739757142205 24.94728855604387 34 19.525900355090737 24.64489222188365 30.24092862124041 25.5882788017852 35 18.601873684770226 23.813711315117295 29.856729852230718 27.727685147881758 36 18.956759914625525 26.067368395220285 29.241507373466973 25.73436431668722 37 18.904065512843324 25.89081147333684 31.363189858679476 23.841933155140364 38 18.848235351058555 25.4034734677211 29.72455075125311 26.02374042996723 39 19.63422041257058 24.58626714357486 30.529895722346172 25.24961672150838 40 20.612441195978864 23.12070835455084 30.991125117505792 25.275725331964505 41 18.12101170524674 24.77332204459732 30.189393087285243 26.91627316287069 42 19.780033252689766 25.183288580584602 28.469565063270775 26.567113103454858 43 19.819298421417514 25.063107170051584 29.316152095267118 25.801442313263788 44 19.78221465095242 23.60238835842282 29.777858671296688 26.837538319328075 45 20.057275338133774 21.810710529132233 29.162295349054396 28.9697187836796 46 20.12183109296915 23.33121328689682 30.32252655000276 26.224429070131272 47 17.55896080913515 23.827617729041705 32.33752502643241 26.275896435390734 48 17.699729165771952 22.824924383874286 32.289261589871224 27.18608486048254 49 18.846599302361568 22.248489892968333 32.812388160733605 26.092522643936494 50 19.21464209048849 21.946570739678066 30.73153872425013 28.107248445583316 51 17.697070586639345 21.968930071870254 29.60675524506987 30.72724409642053 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 208.0 1 778.0 2 1348.0 3 2750.5 4 4153.0 5 2958.0 6 1763.0 7 1819.5 8 1876.0 9 1877.5 10 1879.0 11 1893.0 12 1907.0 13 1990.0 14 2073.0 15 2149.5 16 2226.0 17 2454.5 18 2683.0 19 3116.5 20 3550.0 21 4157.0 22 4764.0 23 5710.0 24 6656.0 25 9392.5 26 14149.5 27 16170.0 28 18882.0 29 21594.0 30 24535.5 31 27477.0 32 31081.0 33 34685.0 34 40395.0 35 46105.0 36 50433.0 37 54761.0 38 59256.5 39 63752.0 40 70184.0 41 76616.0 42 81657.0 43 86698.0 44 96232.0 45 105766.0 46 120092.0 47 134418.0 48 149756.5 49 165095.0 50 157720.0 51 150345.0 52 127965.0 53 105585.0 54 91839.0 55 78093.0 56 70661.0 57 63229.0 58 58619.5 59 54010.0 60 49012.5 61 44015.0 62 38649.5 63 33284.0 64 27265.0 65 21246.0 66 17095.0 67 12944.0 68 11073.0 69 9202.0 70 7418.5 71 5635.0 72 4864.0 73 4093.0 74 3178.5 75 1781.5 76 1299.0 77 1016.0 78 733.0 79 522.5 80 312.0 81 235.0 82 158.0 83 126.0 84 94.0 85 55.5 86 17.0 87 18.5 88 20.0 89 17.5 90 15.0 91 7.5 92 0.0 93 2.0 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1466949.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.468332086396895 #Duplication Level Percentage of deduplicated Percentage of total 1 68.29389494126933 18.75919385720287 2 12.869189614628528 7.06990348034853 3 5.233454683772666 4.312628136389305 4 2.5715007060054313 2.8253934141184502 5 1.5384429272459441 2.1129230610780065 6 0.971430680395185 1.6010148316805657 7 0.6759113640960611 1.299631046697209 8 0.5142663493458589 1.1300831091752843 9 0.42189580446518743 1.0429896656616604 >10 6.283209599560424 44.58154130873033 >50 0.5528539301137286 9.100251465156708 >100 0.06793317694919966 3.2860385634000795 >500 0.0030081110762950987 0.5840407905648548 >1k 0.002256083307221324 1.1389552837459638 >5k 7.520277690737747E-4 1.1554119860502552 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTGC 6560 0.4471866438437873 No Hit CTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTGCT 5203 0.3546817237681746 No Hit TCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTGC 5017 0.3420023463665063 No Hit GCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTGC 4462 0.30416872024862485 No Hit TCCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTG 2099 0.14308609229087035 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1983 0.13517852358875462 No Hit CGCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTG 1676 0.11425073400643103 No Hit GCCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTG 1485 0.1012305131262232 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.090121742473665E-4 0.0 0.0 0.37029235508528247 0.0 2 4.090121742473665E-4 0.0 0.0 1.5420440656082794 0.0 3 4.090121742473665E-4 0.0 0.0 2.2798338592548206 0.0 4 4.090121742473665E-4 0.0 0.0 3.0286669816060408 0.0 5 4.090121742473665E-4 0.0 0.0 4.258975601742119 0.0 6 4.090121742473665E-4 0.0 0.0 5.022669499757661 0.0 7 4.090121742473665E-4 0.0 0.0 5.713082049887215 0.0 8 4.090121742473665E-4 0.0 0.0 6.792874189900262 0.0 9 4.090121742473665E-4 0.0 0.0 7.280621207690247 0.0 10 4.090121742473665E-4 0.0 0.0 8.26504534240795 0.0 11 4.090121742473665E-4 0.0 0.0 10.113712201310339 0.0 12 4.090121742473665E-4 0.0 0.0 12.026934815048103 0.0 13 4.090121742473665E-4 0.0 0.0 12.579714768543418 0.0 14 4.090121742473665E-4 0.0 0.0 12.785856904364092 0.0 15 4.090121742473665E-4 0.0 0.0 13.106317942886903 0.0 16 4.090121742473665E-4 0.0 0.0 13.809137195635294 0.0 17 4.090121742473665E-4 0.0 0.0 14.78381320686677 0.0 18 4.090121742473665E-4 0.0 0.0 15.831293385114275 0.0 19 4.090121742473665E-4 0.0 0.0 16.667791450145845 0.0 20 4.090121742473665E-4 0.0 0.0 17.51083370996538 0.0 21 4.090121742473665E-4 0.0 0.0 18.64066167262802 0.0 22 4.090121742473665E-4 0.0 0.0 19.862926386670566 0.0 23 7.498556527868385E-4 0.0 0.0 20.959147182349216 0.0 24 7.498556527868385E-4 0.0 0.0 21.78432924389328 0.0 25 7.498556527868385E-4 0.0 0.0 22.517347228840265 0.0 26 7.498556527868385E-4 0.0 0.0 23.197261799830805 0.0 27 7.498556527868385E-4 0.0 0.0 23.837025009049395 0.0 28 7.498556527868385E-4 0.0 0.0 24.520757026999576 0.0 29 7.498556527868385E-4 0.0 0.0 25.22221290583381 0.0 30 7.498556527868385E-4 0.0 0.0 26.041805134329824 0.0 31 7.498556527868385E-4 0.0 0.0 26.81463363757022 0.0 32 7.498556527868385E-4 0.0 0.0 27.53217732859152 0.0 33 7.498556527868385E-4 0.0 0.0 28.225725638723638 0.0 34 7.498556527868385E-4 0.0 0.0 28.913820453199122 0.0 35 7.498556527868385E-4 0.0 0.0 29.623388406822595 0.0 36 8.18024348494733E-4 0.0 0.0 30.339909567408274 0.0 37 8.18024348494733E-4 0.0 0.0 31.03618462536871 0.0 38 8.18024348494733E-4 0.0 0.0 31.739412890291348 0.0 39 8.18024348494733E-4 0.0 0.0 32.44686761434787 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCGTAA 30 2.1659125E-6 45.000004 20 TTATCCG 20 7.0339255E-4 45.0 1 TCGTTTG 440 0.0 39.375004 1 CTACGGG 190 0.0 39.078945 3 TACGGGA 415 0.0 39.036144 4 TGGGCGA 1630 0.0 38.2362 6 TTTGGGA 11065 0.0 38.228645 4 TTGGGAC 4055 0.0 37.786682 5 TGTCACG 60 1.5643309E-10 37.500004 1 AACCGGT 30 1.1400755E-4 37.500004 38 CGTTATA 30 1.1400755E-4 37.500004 26 ATCGTCG 30 1.1400755E-4 37.500004 1 CGTTTTT 1445 0.0 37.370243 1 CTTTTCG 410 0.0 37.317074 1 TTGGGAT 7160 0.0 37.23813 5 GGGCGAT 2605 0.0 37.226486 7 GGCCGAT 425 0.0 37.058823 8 TCTGGGA 5000 0.0 36.81 4 GGCGATT 1375 0.0 36.654545 8 CTTGGGA 4745 0.0 36.51212 4 >>END_MODULE