##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933933.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 665402 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.30834442938254 33.0 31.0 34.0 31.0 34.0 2 32.534882672429596 34.0 31.0 34.0 31.0 34.0 3 32.60311210366064 34.0 31.0 34.0 31.0 34.0 4 36.01775918918188 37.0 35.0 37.0 35.0 37.0 5 36.047371363476515 37.0 35.0 37.0 35.0 37.0 6 35.58017108454739 37.0 35.0 37.0 33.0 37.0 7 35.952224369629185 37.0 35.0 37.0 35.0 37.0 8 35.92283461726896 37.0 35.0 37.0 35.0 37.0 9 37.806706321892634 39.0 38.0 39.0 35.0 39.0 10 37.49601594224244 39.0 37.0 39.0 35.0 39.0 11 37.42465607256967 39.0 37.0 39.0 35.0 39.0 12 37.2914929621492 39.0 37.0 39.0 34.0 39.0 13 37.18878963393558 39.0 37.0 39.0 34.0 39.0 14 38.387595769174126 40.0 38.0 41.0 34.0 41.0 15 38.439185635149876 40.0 38.0 41.0 34.0 41.0 16 38.5463945103862 40.0 38.0 41.0 34.0 41.0 17 38.4860625606776 40.0 38.0 41.0 34.0 41.0 18 38.46073802002399 40.0 38.0 41.0 34.0 41.0 19 38.48535171219804 40.0 38.0 41.0 34.0 41.0 20 38.402467981761404 40.0 37.0 41.0 34.0 41.0 21 38.335842092449376 40.0 37.0 41.0 34.0 41.0 22 38.322843934944586 40.0 37.0 41.0 34.0 41.0 23 38.2734737797602 40.0 37.0 41.0 34.0 41.0 24 38.2245965596737 40.0 37.0 41.0 34.0 41.0 25 38.13039035049489 40.0 37.0 41.0 34.0 41.0 26 38.06707824743538 40.0 37.0 41.0 34.0 41.0 27 38.04428901626385 40.0 37.0 41.0 34.0 41.0 28 38.00292154216549 40.0 37.0 41.0 34.0 41.0 29 37.965813147540885 40.0 37.0 41.0 34.0 41.0 30 37.87454350903664 40.0 36.0 41.0 33.0 41.0 31 37.84369448844458 40.0 36.0 41.0 33.0 41.0 32 37.74530584518832 40.0 36.0 41.0 33.0 41.0 33 37.640746496103105 40.0 36.0 41.0 33.0 41.0 34 37.65844857695048 40.0 36.0 41.0 33.0 41.0 35 37.62744776841669 40.0 36.0 41.0 33.0 41.0 36 37.501777872624366 40.0 36.0 41.0 33.0 41.0 37 37.4594906537702 40.0 36.0 41.0 33.0 41.0 38 37.4209665735901 40.0 36.0 41.0 33.0 41.0 39 37.370216801272015 40.0 36.0 41.0 33.0 41.0 40 37.26449725128569 39.0 35.0 41.0 32.0 41.0 41 37.17390840424285 39.0 35.0 41.0 32.0 41.0 42 37.177976621651275 39.0 35.0 41.0 32.0 41.0 43 37.067429914547894 39.0 35.0 41.0 32.0 41.0 44 36.96185914680148 39.0 35.0 41.0 31.0 41.0 45 36.988933005912216 39.0 35.0 41.0 32.0 41.0 46 36.89624016759793 39.0 35.0 41.0 31.0 41.0 47 36.76227603764341 39.0 35.0 41.0 31.0 41.0 48 36.752074685678735 39.0 35.0 41.0 31.0 41.0 49 36.77592643244234 39.0 35.0 41.0 31.0 41.0 50 36.683872305764034 39.0 35.0 40.0 31.0 41.0 51 35.699928764866954 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 10.0 10 19.0 11 15.0 12 16.0 13 15.0 14 18.0 15 22.0 16 24.0 17 44.0 18 79.0 19 158.0 20 306.0 21 475.0 22 729.0 23 1164.0 24 1660.0 25 2496.0 26 3510.0 27 4315.0 28 5025.0 29 6315.0 30 7998.0 31 10573.0 32 14230.0 33 20539.0 34 36743.0 35 52102.0 36 48691.0 37 77617.0 38 151025.0 39 219338.0 40 129.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.818383473449135 4.6565835389734325 55.126825588140704 16.398207399436732 2 18.67788194204406 7.894776390813372 51.411327287865085 22.01601437927749 3 19.30487134093375 7.698053206933553 50.30868557653869 22.688389875594 4 19.114159560686623 4.449941539099672 51.81003363380332 24.62586526641038 5 20.07132530410188 5.123819886324357 49.80538080739162 24.99947400218214 6 20.367988073375194 8.738476890661586 51.87916477557928 19.01437026038395 7 78.20956354203925 2.62593139185034 13.245677049362643 5.918828016747771 8 78.5404913120189 5.278012389502887 9.281456923784418 6.900039374693794 9 72.66163912942852 5.390125067252578 12.083372156981795 9.864863646337103 10 37.25958142596505 24.778104063408286 20.361676099560867 17.60063841106579 11 26.386905960607272 24.482343004679876 28.61638528288163 20.514365751831225 12 25.006988256723005 21.073426289671506 31.90853048232497 22.01105497128052 13 22.130080763207804 24.33581504113303 33.66160606670854 19.872498128950618 14 17.476653211141535 27.775540199758943 31.710755302809428 23.03705128629009 15 14.886790241087342 24.333410479679955 38.89994319223567 21.879856086997034 16 16.65474404946183 24.42929236762138 33.08421074778855 25.831752835128235 17 16.819757079179205 25.058836613054964 30.956173861815866 27.165232445949965 18 18.362884391691036 24.146455826703257 32.771016618525344 24.719643163080363 19 20.29029068142266 25.558985395294876 30.11532877869318 24.035395144589287 20 22.03314687963066 25.358955939417072 32.1183284691059 20.489568711846374 21 22.169154886820298 27.108875536893486 30.583917691861462 20.138051884424755 22 20.12377480079711 24.408853595270227 30.092184874707318 25.37518672922534 23 19.310281604203173 26.410651004956403 28.93213425868873 25.346933132151694 24 21.276762017547288 23.581233600139466 29.893057129374423 25.248947252938827 25 18.178634870349054 27.674849188911367 27.867214105157483 26.279301835582096 26 17.338541212680454 28.251493082377273 28.3395601455962 26.070405559346078 27 18.06547019696364 28.488041815323665 27.785459015752885 25.66102897195981 28 16.452911172494222 25.16418646171788 31.13320969879862 27.24969266698928 29 19.322304411468554 24.202512165578103 28.94596048704392 27.52922293590942 30 19.095975064697733 27.55732624789225 28.205806414768812 25.140892272641203 31 20.014216969591313 27.645543596201993 25.911103363079764 26.42913607112693 32 20.84168667963126 28.82873811620644 24.440563749432673 25.889011454729623 33 19.538264086972987 28.338057294688024 24.45454026287868 27.66913835546031 34 17.936976444314865 26.574612039038055 28.430783195722288 27.057628320924792 35 17.90676914106059 26.359403788987713 26.086335778972714 29.64749129097899 36 18.883171376100464 28.94520906158984 25.87623722201015 26.29538234029955 37 18.602589111544603 25.542454035304974 29.062431432427317 26.792525420723113 38 19.585904460762066 26.720088006949183 25.897727989997026 27.796279542291728 39 21.175019011063988 26.933192265728085 29.104811828037786 22.786976895170138 40 20.19245508730061 25.820180883135308 30.05596616782035 23.93139786174373 41 17.20568919239798 26.36556547771122 28.507578877129912 27.921166452760886 42 18.780226088890625 25.564395658564298 26.83595781196931 28.819420440575772 43 21.267143771734982 25.357302803418087 26.45227997511279 26.923273449734147 44 20.15473352950547 23.72565757241487 28.076861806847592 28.042747091232066 45 20.251667413082618 23.24053729925669 26.577467455763582 29.93032783189711 46 21.783072488510705 24.581380879528467 28.42762720881512 25.207919423145707 47 16.583659201505256 24.232118328469106 32.76710920616409 26.41711326386155 48 17.36423996321021 23.966865143176605 30.014036627482334 28.65485826613085 49 19.29344967403164 21.98445451020586 32.51447996850024 26.207615847262254 50 20.16525348586268 21.830262007027333 30.193026170645716 27.811458336464273 51 18.208691888512508 21.6386485162353 27.032680995849123 33.11997859940307 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 136.0 1 347.0 2 558.0 3 1432.0 4 2306.0 5 1563.5 6 821.0 7 916.0 8 1011.0 9 1067.5 10 1124.0 11 1192.5 12 1261.0 13 1167.0 14 1073.0 15 1017.0 16 961.0 17 1137.0 18 1313.0 19 1301.0 20 1289.0 21 1641.0 22 1993.0 23 2381.0 24 2769.0 25 3160.5 26 4315.0 27 5078.0 28 6435.5 29 7793.0 30 9300.0 31 10807.0 32 11526.5 33 12246.0 34 13822.0 35 15398.0 36 17504.0 37 19610.0 38 21619.0 39 23628.0 40 26894.5 41 30161.0 42 34693.5 43 39226.0 44 44605.5 45 49985.0 46 67284.0 47 84583.0 48 87358.5 49 90134.0 50 85010.5 51 79887.0 52 65282.0 53 50677.0 54 42176.5 55 33676.0 56 29058.5 57 24441.0 58 22179.5 59 19918.0 60 18057.0 61 16196.0 62 14145.5 63 12095.0 64 9930.0 65 7765.0 66 6207.5 67 4650.0 68 3636.5 69 2623.0 70 2270.0 71 1917.0 72 1504.5 73 1092.0 74 999.5 75 605.0 76 303.0 77 281.0 78 259.0 79 175.0 80 91.0 81 80.5 82 70.0 83 41.0 84 12.0 85 7.0 86 2.0 87 1.5 88 1.0 89 1.5 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 665402.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.589073995170605 #Duplication Level Percentage of deduplicated Percentage of total 1 66.54343652597409 19.68958667259986 2 13.629336841920491 8.065589126413807 3 5.8474419628595005 5.190611787645463 4 3.1027452521329897 3.6722943541410924 5 1.8152184901856712 2.685531711175285 6 1.2042667062944108 2.1379882009479423 7 0.8270824876384886 1.7130823448791515 8 0.6083996910380328 1.4401586781410631 9 0.43150409597760364 1.1491025962590462 >10 5.67839216111697 39.28802488957684 >50 0.2259166864134252 4.23762218669852 >100 0.07547671114229501 4.094509574203125 >500 0.0041075761165874835 0.9870516382916292 >1k 0.006161364174881227 4.792905200065309 >5k 5.134470145734354E-4 0.8559410389618345 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGC 5634 0.8467062016645577 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGC 4824 0.7249752781025606 No Hit GAATCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTC 4315 0.6484801668765648 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCG 4235 0.6364573596111824 No Hit TCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGC 4054 0.6092557581732547 No Hit CTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGCT 3322 0.4992470716950055 No Hit GCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGC 3320 0.4989465015133709 No Hit TCCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTG 1779 0.26735717656394176 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1306 0.19627232860736815 No Hit CGCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTG 1263 0.1898100697022251 No Hit GAATGACTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCT 1063 0.15975305153876904 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTC 1046 0.15719820499487527 No Hit GAACTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCT 1021 0.15344107772444326 No Hit TGCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTG 971 0.14592682318357925 No Hit TTCCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCT 971 0.14592682318357925 No Hit GCCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTG 936 0.14066684500497445 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACCGATCAT 931 0.13991541955088801 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACCGATCATCGTA 797 0.11977721738137247 No Hit TTCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTG 713 0.10715326975272092 No Hit CGTTCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTC 673 0.1011418661200297 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5192349887737037 0.0 2 0.0 0.0 0.0 2.6190182776727453 0.0 3 0.0 0.0 0.0 3.875401636905209 0.0 4 0.0 0.0 0.0 5.186939624467615 0.0 5 0.0 0.0 0.0 7.655823096413897 0.0 6 1.5028509081728037E-4 0.0 0.0 8.844427879687768 0.0 7 1.5028509081728037E-4 0.0 0.0 10.03844292623106 0.0 8 1.5028509081728037E-4 0.0 0.0 11.793923072067713 0.0 9 1.5028509081728037E-4 0.0 0.0 12.565336443232813 0.0 10 1.5028509081728037E-4 0.0 0.0 14.609063393257008 0.0 11 1.5028509081728037E-4 0.0 0.0 17.250474149461528 0.0 12 1.5028509081728037E-4 0.0 0.0 20.384519433365092 0.0 13 1.5028509081728037E-4 0.0 0.0 21.239791885206238 0.0 14 1.5028509081728037E-4 0.0 0.0 21.562003119918487 0.0 15 1.5028509081728037E-4 0.0 0.0 22.12436992975675 0.0 16 1.5028509081728037E-4 0.0 0.0 23.214838548726934 0.0 17 1.5028509081728037E-4 0.0 0.0 24.66839594711167 0.0 18 1.5028509081728037E-4 0.0 0.0 26.269082449406525 0.0 19 1.5028509081728037E-4 0.0 0.0 27.47451916285193 0.0 20 1.5028509081728037E-4 0.0 0.0 28.631564077054172 0.0 21 1.5028509081728037E-4 0.0 0.0 30.12254246305241 0.0 22 1.5028509081728037E-4 0.0 0.0 31.61006429196185 0.0 23 1.5028509081728037E-4 0.0 0.0 32.893498967541426 0.0 24 1.5028509081728037E-4 0.0 0.0 33.94098605053787 0.0 25 1.5028509081728037E-4 0.0 0.0 34.85276569652631 0.0 26 1.5028509081728037E-4 0.0 0.0 35.65348466040078 0.0 27 1.5028509081728037E-4 0.0 0.0 36.439625970465976 0.0 28 1.5028509081728037E-4 0.0 0.0 37.25281859687828 0.0 29 1.5028509081728037E-4 0.0 0.0 38.09546710109077 0.0 30 1.5028509081728037E-4 0.0 0.0 39.019570124526226 0.0 31 1.5028509081728037E-4 0.0 0.0 39.91061042798188 0.0 32 1.5028509081728037E-4 0.0 0.0 40.72801103693707 0.0 33 1.5028509081728037E-4 0.0 0.0 41.47733249975203 0.0 34 1.5028509081728037E-4 0.0 0.0 42.241832756739534 0.0 35 1.5028509081728037E-4 0.0 0.0 43.037592312617036 0.0 36 1.5028509081728037E-4 0.0 0.0 43.810658819781125 0.0 37 1.5028509081728037E-4 0.0 0.0 44.59619898948305 0.0 38 1.5028509081728037E-4 0.0 0.0 45.344167886480655 0.0 39 1.5028509081728037E-4 0.0 0.0 46.1107721347396 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAACT 20 7.031142E-4 45.000004 13 GATCCGA 20 7.031142E-4 45.000004 29 CGACCTT 20 7.031142E-4 45.000004 41 GTTCGCT 20 7.031142E-4 45.000004 21 ACGGAGT 20 7.031142E-4 45.000004 23 TCCACGC 20 7.031142E-4 45.000004 44 ATAAGCG 20 7.031142E-4 45.000004 33 CGCAGAT 20 7.031142E-4 45.000004 13 ACCTTCG 20 7.031142E-4 45.000004 14 CGAACGA 25 3.889029E-5 45.0 22 ACGGAAC 25 3.889029E-5 45.0 14 CGATCTA 35 1.2109012E-7 45.0 11 ACGAACG 25 3.889029E-5 45.0 21 GTATTCG 30 2.164119E-6 44.999996 1 TCGCGTG 30 2.164119E-6 44.999996 1 TTTGTCG 125 0.0 43.199997 1 TTCGGGT 120 0.0 41.249996 4 GACCGAT 265 0.0 40.75472 9 TTTCGCG 235 0.0 40.212765 1 GTTTGCG 135 0.0 40.0 1 >>END_MODULE