##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933932.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2387511 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.416463421529784 33.0 31.0 34.0 31.0 34.0 2 32.671519838023784 34.0 31.0 34.0 31.0 34.0 3 32.65808157533096 34.0 31.0 34.0 31.0 34.0 4 36.092007115359884 37.0 35.0 37.0 35.0 37.0 5 36.14663262284446 37.0 35.0 37.0 35.0 37.0 6 35.811350397966756 37.0 35.0 37.0 35.0 37.0 7 36.12124425814164 37.0 35.0 37.0 35.0 37.0 8 36.13532335557826 37.0 37.0 37.0 35.0 37.0 9 38.001760410737376 39.0 39.0 39.0 37.0 39.0 10 37.6700764938884 39.0 37.0 39.0 35.0 39.0 11 37.60908033512725 39.0 37.0 39.0 35.0 39.0 12 37.47114170364032 39.0 37.0 39.0 35.0 39.0 13 37.43195989463504 39.0 37.0 39.0 35.0 39.0 14 38.594670768009024 40.0 38.0 41.0 34.0 41.0 15 38.66630394582475 40.0 38.0 41.0 34.0 41.0 16 38.74161082399201 40.0 38.0 41.0 35.0 41.0 17 38.73021485555459 40.0 38.0 41.0 35.0 41.0 18 38.59528186466994 40.0 38.0 41.0 35.0 41.0 19 38.51743677830176 40.0 37.0 41.0 35.0 41.0 20 38.37098677241696 40.0 37.0 41.0 34.0 41.0 21 38.28217168423517 40.0 37.0 41.0 34.0 41.0 22 38.3111868385109 40.0 37.0 41.0 34.0 41.0 23 38.261017436150034 40.0 37.0 41.0 34.0 41.0 24 38.21593073288458 40.0 37.0 41.0 34.0 41.0 25 38.117125324239346 40.0 36.0 41.0 34.0 41.0 26 38.04639182814236 40.0 36.0 41.0 34.0 41.0 27 38.0282930633618 40.0 36.0 41.0 34.0 41.0 28 37.94786704647643 40.0 36.0 41.0 34.0 41.0 29 37.8879221917721 40.0 36.0 41.0 34.0 41.0 30 37.75558060256058 40.0 36.0 41.0 33.0 41.0 31 37.626035649678684 40.0 36.0 41.0 33.0 41.0 32 37.42456265122967 40.0 35.0 41.0 33.0 41.0 33 37.192946964432835 40.0 35.0 41.0 32.0 41.0 34 36.98299777466994 40.0 35.0 41.0 31.0 41.0 35 36.83146130007359 40.0 35.0 41.0 31.0 41.0 36 36.68819578213461 39.0 35.0 41.0 31.0 41.0 37 36.612565135825555 39.0 35.0 41.0 31.0 41.0 38 36.561088514356584 39.0 35.0 41.0 30.0 41.0 39 36.49969864013192 39.0 35.0 41.0 30.0 41.0 40 36.38199405154573 39.0 35.0 41.0 30.0 41.0 41 36.25504845841548 39.0 35.0 41.0 30.0 41.0 42 36.206296431723246 39.0 35.0 41.0 30.0 41.0 43 36.08765614064186 39.0 35.0 41.0 30.0 41.0 44 35.979057269264935 39.0 35.0 41.0 29.0 41.0 45 36.00232124584976 39.0 35.0 41.0 29.0 41.0 46 35.9577178911427 39.0 35.0 41.0 29.0 41.0 47 35.90147856910397 39.0 35.0 41.0 29.0 41.0 48 35.82966654394472 39.0 35.0 41.0 28.0 41.0 49 35.81407247966606 39.0 35.0 40.0 28.0 41.0 50 35.73152207466269 39.0 35.0 40.0 28.0 41.0 51 34.81877905483996 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 10.0 9 27.0 10 55.0 11 44.0 12 31.0 13 46.0 14 39.0 15 64.0 16 107.0 17 205.0 18 364.0 19 742.0 20 1323.0 21 2228.0 22 3530.0 23 5851.0 24 10214.0 25 18045.0 26 27540.0 27 31665.0 28 31797.0 29 30731.0 30 33254.0 31 38981.0 32 50232.0 33 71497.0 34 130536.0 35 152715.0 36 170891.0 37 263890.0 38 511609.0 39 798721.0 40 527.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.812260131995203 4.150054177760857 52.699778137147845 22.33790755309609 2 23.132458866158103 4.208776420297121 51.695803705197584 20.962961008347186 3 18.080377430721786 4.534596908663458 55.76376402035426 21.621261640260506 4 17.54446366948676 4.511309057843084 54.79966375024031 23.144563522429845 5 17.81654618554637 5.301504370032222 53.481177678343684 23.400771766077728 6 20.325770226817802 5.9548207317160005 55.298635273303454 18.420773768162743 7 78.76269470590921 1.775866163548566 14.20864657796341 5.252792552578815 8 80.74224579488849 2.2355499095082703 12.307126543081896 4.715077752521349 9 75.24941246343995 4.404838344200298 14.570990458263857 5.774758734095885 10 35.3012823815262 29.431236128336163 20.905662843019364 14.361818647118273 11 25.802980593597262 22.841444500150995 31.688859234575258 19.666715671676485 12 23.001150570615174 20.972845779558714 34.53001891928456 21.495984730541558 13 22.611916761849475 20.39776989509158 37.02324303427293 19.96707030878601 14 19.01448831021093 22.98871083735321 36.79120221854475 21.20559863389111 15 17.266810498464718 23.724874984869178 38.31358263899099 20.694731877675117 16 20.561580658685973 24.36160503553701 34.47862648590939 20.598187819867636 17 21.287189881009972 24.077585401700766 33.14091537169881 21.494309345590448 18 21.252341874026968 23.11637517062749 34.235737552622794 21.395545402722753 19 21.780381325991797 25.229286901714797 32.29983024161983 20.69050153067358 20 22.09036942657018 26.734955357273748 31.808314181589108 19.36636103456696 21 22.08777257989597 25.776509511369788 33.40177280858601 18.73394510014823 22 21.00513882449128 23.233191386343353 33.71284990938261 22.04881987978275 23 20.152493538249665 24.11151194696066 33.093585746830065 22.642408767959605 24 20.461685830976275 24.154778763322977 32.546279367927525 22.83725603777323 25 21.144405198551965 25.524447845475894 30.35391250553401 22.977234450438132 26 19.610045775705327 26.498139694434915 30.669973876560153 23.22184065329961 27 19.421439314834572 25.386438010128536 32.52567213302891 22.666450542007972 28 18.29574816618646 25.015298358834787 32.22783057334605 24.461122901632702 29 19.98403358141596 25.175842121774515 31.739581513969988 23.100542782839533 30 21.36421570413707 24.929392995466827 32.07759042785562 21.62880087254048 31 20.565769121063735 26.128968620458714 31.10854777213592 22.196714486341634 32 22.431687225734247 26.085157303987287 29.579298273390155 21.903857196888307 33 23.119767825153474 25.013958050873903 29.912574224788912 21.95369989918371 34 20.623904978867113 24.72172903077724 32.097988239635335 22.556377750720312 35 21.27793337915511 26.343627317319168 30.013348629597935 22.365090673927785 36 22.670722773633294 26.91417966241831 29.402461391800916 21.012636172147477 37 21.918893776824483 26.694369156833204 30.181766701807867 21.204970364534447 38 23.267034162355692 24.5025467945488 30.13640565425667 22.09401338883884 39 23.0723125464134 22.921569785437637 31.459666573263956 22.546451094885008 40 23.093966896906444 22.82196815009439 33.06334504846261 21.020719904536566 41 22.156463362891312 24.129647989056384 30.75407820110567 22.959810446946634 42 23.277672856795213 24.375008115145857 29.965097543006085 22.382221485052845 43 22.231939454938637 24.099868021550478 30.56865497164202 23.09953755186887 44 21.698790078872936 23.721231022600524 29.894019336455415 24.685959562071126 45 20.92229103865909 23.358468296062302 29.663779559549674 26.055461105728938 46 21.226582830403714 24.133375720572598 30.60496894045724 24.03507250856645 47 19.667595248775818 24.93345580397326 32.18510825709285 23.213840690158076 48 20.212556088746815 24.30598225516029 31.604042871425513 23.877418784667377 49 22.102055236604144 22.364671827690007 32.11013478053085 23.423138155174993 50 20.806144976923665 22.623686341130995 31.734639128364222 24.835529553581114 51 20.0980854119625 22.053929803883626 30.880485995666618 26.96749878848726 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 488.0 1 1524.0 2 2560.0 3 23429.5 4 44299.0 5 29035.5 6 13772.0 7 13671.0 8 13570.0 9 13616.0 10 13662.0 11 13304.0 12 12946.0 13 12383.0 14 11820.0 15 11424.0 16 11028.0 17 10497.0 18 9966.0 19 9647.5 20 9329.0 21 9920.0 22 10511.0 23 11309.5 24 12108.0 25 13855.5 26 18567.0 27 21531.0 28 25905.0 29 30279.0 30 34932.5 31 39586.0 32 45846.0 33 52106.0 34 57713.5 35 63321.0 36 69251.0 37 75181.0 38 81825.5 39 88470.0 40 96488.5 41 104507.0 42 115363.0 43 126219.0 44 142094.5 45 157970.0 46 191496.0 47 225022.0 48 249299.5 49 273577.0 50 264017.5 51 254458.0 52 213239.5 53 172021.0 54 148787.0 55 125553.0 56 113129.0 57 100705.0 58 90470.0 59 80235.0 60 71333.5 61 62432.0 62 55323.5 63 48215.0 64 41277.0 65 34339.0 66 29992.5 67 25646.0 68 21143.0 69 16640.0 70 14131.0 71 11622.0 72 9448.0 73 7274.0 74 5911.0 75 3338.5 76 2129.0 77 1713.5 78 1298.0 79 939.5 80 581.0 81 404.5 82 228.0 83 153.0 84 78.0 85 59.5 86 41.0 87 27.5 88 14.0 89 16.5 90 19.0 91 11.5 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2387511.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.77149895267942 #Duplication Level Percentage of deduplicated Percentage of total 1 71.33784621744694 23.37848152601468 2 11.463342785105452 7.513418521525771 3 4.301351977882971 4.2288525551489204 4 2.193612218642188 2.8755184210326896 5 1.4134900499995207 2.3161093846591037 6 1.0077691123744368 1.9815662646432919 7 0.7811790256116463 1.7920285333781039 8 0.6439967140825118 1.6883790112867219 9 0.5592470165252557 1.6494626714711857 >10 6.082941189426307 40.02161531968279 >50 0.15013004206216193 3.240753690147942 >100 0.05774809116119307 3.522857450348154 >500 0.004510431382085313 0.9988820581925909 >1k 0.0019330420208937046 1.5398375919059717 >5k 6.443473402979015E-4 1.6150535967106818 >10k+ 2.577389361191606E-4 1.6371834038514277 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27628 1.1571883857289034 No Hit CCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGC 11138 0.46651093963546136 No Hit CTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGCT 9587 0.4015478881563268 Illumina Single End Adapter 2 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTG 8157 0.3416528761542879 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTT 7381 0.3091504081028318 No Hit CGTTCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTC 7364 0.30843836949861175 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCT 5753 0.24096224059281823 No Hit GCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGC 4988 0.20892050340291626 No Hit TCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGC 4977 0.2084597725413621 No Hit CGTCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCT 4923 0.20619800285736906 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCC 3185 0.133402526731814 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTC 2800 0.11727694657741891 No Hit TCCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTG 2480 0.10387386696857102 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.931923664435473E-4 0.0 0.0 0.4183436222911643 0.0 2 2.931923664435473E-4 0.0 0.0 1.3608733111596134 0.0 3 2.931923664435473E-4 0.0 0.0 2.1413513906323365 0.0 4 3.350769902211969E-4 0.0 0.0 2.9389183966063404 0.0 5 3.350769902211969E-4 0.0 0.0 4.37237776077262 0.0 6 3.350769902211969E-4 0.0 0.0 5.879721601282674 0.0 7 3.350769902211969E-4 0.0 0.0 7.112846809920457 0.0 8 3.350769902211969E-4 0.0 0.0 8.710326360800012 0.0 9 3.350769902211969E-4 0.0 0.0 9.713169907908277 0.0 10 3.350769902211969E-4 0.0 0.0 11.076975142732326 0.0 11 3.350769902211969E-4 0.0 0.0 13.037175535526329 0.0 12 3.350769902211969E-4 0.0 0.0 14.753439879439298 0.0 13 3.350769902211969E-4 0.0 0.0 15.400724855299096 0.0 14 3.350769902211969E-4 0.0 0.0 15.711927609967033 0.0 15 3.350769902211969E-4 0.0 0.0 16.031423520142944 0.0 16 3.350769902211969E-4 0.0 0.0 16.610017713007394 0.0 17 3.350769902211969E-4 0.0 0.0 17.41416060491449 0.0 18 3.350769902211969E-4 0.0 0.0 18.278910547427845 0.0 19 3.350769902211969E-4 0.0 0.0 18.9678707239464 0.0 20 3.350769902211969E-4 0.0 0.0 19.712034834603905 0.0 21 3.769616139988465E-4 0.0 0.0 20.701014571241767 0.0 22 3.769616139988465E-4 0.0 0.0 21.79474775194753 0.0 23 3.769616139988465E-4 0.0 0.0 22.815894879646628 0.0 24 4.188462377764961E-4 0.0 0.0 23.61559800143329 0.0 25 4.188462377764961E-4 0.0 0.0 24.313856564430488 0.0 26 4.188462377764961E-4 0.0 0.0 24.95376984650542 0.0 27 4.188462377764961E-4 0.0 0.0 25.615086171330727 0.0 28 4.188462377764961E-4 0.0 0.0 26.28084226627647 0.0 29 4.188462377764961E-4 0.0 0.0 26.99061910081252 0.0 30 4.188462377764961E-4 0.0 0.0 27.759369485627502 0.0 31 4.188462377764961E-4 0.0 0.0 28.46629816574667 0.0 32 4.188462377764961E-4 0.0 0.0 29.146755763638367 0.0 33 4.188462377764961E-4 0.0 0.0 29.81799874429898 0.0 34 4.188462377764961E-4 0.0 0.0 30.504110766400657 0.0 35 4.188462377764961E-4 0.0 0.0 31.228840411625328 0.0 36 4.188462377764961E-4 0.0 0.0 31.890240505698195 0.0 37 4.188462377764961E-4 0.0 0.0 32.58276087523785 0.0 38 4.188462377764961E-4 0.0 0.0 33.31867371501116 0.0 39 4.188462377764961E-4 0.0 0.0 34.387485544569216 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCACTA 20 7.034815E-4 45.0 13 CGTTTTT 14855 0.0 43.985188 1 CGTTTCT 1040 0.0 38.509613 1 CGTTTTC 755 0.0 38.145695 1 CCATACG 160 0.0 37.96875 2 TGGGCGA 2965 0.0 37.71501 6 TTTGGGA 13670 0.0 37.52743 4 TTGGGAC 5610 0.0 37.41979 5 GTTTTTT 17895 0.0 37.091366 2 TTGGGAT 8115 0.0 36.98706 5 TTTCTCG 1060 0.0 36.933964 1 GCGATCG 105 0.0 36.428574 9 CGTTCTG 955 0.0 36.047123 1 ATAGGCG 25 0.0021075623 36.0 13 AATCGTT 75 1.8189894E-12 36.0 22 TAGCGGG 470 0.0 35.904255 3 TGCGGGA 3355 0.0 35.812218 4 GGGCGAT 4870 0.0 35.805954 7 TCTTGCG 850 0.0 35.735294 1 TTTGGGC 4800 0.0 35.671875 4 >>END_MODULE