##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933928.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 457575 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.34412500682948 33.0 31.0 34.0 31.0 34.0 2 32.55522482653117 34.0 31.0 34.0 31.0 34.0 3 32.627999781456595 34.0 31.0 34.0 31.0 34.0 4 36.03416052013331 37.0 35.0 37.0 35.0 37.0 5 36.06970004917227 37.0 35.0 37.0 35.0 37.0 6 35.48915259793476 37.0 35.0 37.0 33.0 37.0 7 35.932011145713815 37.0 35.0 37.0 35.0 37.0 8 35.85931049554718 37.0 35.0 37.0 35.0 37.0 9 37.75112495219363 39.0 38.0 39.0 35.0 39.0 10 37.531128230344756 39.0 37.0 39.0 35.0 39.0 11 37.516249795115556 39.0 37.0 39.0 35.0 39.0 12 37.29379883079277 39.0 37.0 39.0 35.0 39.0 13 37.129956837676886 39.0 37.0 39.0 33.0 39.0 14 38.3518745560837 40.0 38.0 41.0 34.0 41.0 15 38.384898650494456 40.0 38.0 41.0 34.0 41.0 16 38.532188165874445 40.0 38.0 41.0 35.0 41.0 17 38.451134786646996 40.0 38.0 41.0 34.0 41.0 18 38.43258263672622 40.0 37.0 41.0 34.0 41.0 19 38.45105174015189 40.0 37.0 41.0 34.0 41.0 20 38.315878271321644 40.0 37.0 41.0 34.0 41.0 21 38.3034606348686 40.0 37.0 41.0 34.0 41.0 22 38.27327541933016 40.0 37.0 41.0 34.0 41.0 23 38.19576462874939 40.0 37.0 41.0 34.0 41.0 24 38.1744085669016 40.0 37.0 41.0 34.0 41.0 25 38.10262798448342 40.0 37.0 41.0 34.0 41.0 26 37.99134131016773 40.0 36.0 41.0 34.0 41.0 27 37.97002458613342 40.0 36.0 41.0 34.0 41.0 28 37.90679779271158 40.0 36.0 41.0 34.0 41.0 29 37.884019013276514 40.0 36.0 41.0 34.0 41.0 30 37.83486204447358 40.0 36.0 41.0 33.0 41.0 31 37.748961372452605 40.0 36.0 41.0 33.0 41.0 32 37.610686772660216 40.0 36.0 41.0 33.0 41.0 33 37.545552095284926 40.0 36.0 41.0 33.0 41.0 34 37.41432333497241 40.0 36.0 41.0 33.0 41.0 35 37.42299295197508 40.0 36.0 41.0 33.0 41.0 36 37.34017592744359 40.0 35.0 41.0 33.0 41.0 37 37.24406709282631 40.0 35.0 41.0 33.0 41.0 38 37.2586570507567 40.0 35.0 41.0 32.0 41.0 39 37.158111784953284 39.0 35.0 41.0 32.0 41.0 40 36.95120144238649 39.0 35.0 41.0 31.0 41.0 41 36.76138556520789 39.0 35.0 41.0 31.0 41.0 42 36.87257826585805 39.0 35.0 41.0 31.0 41.0 43 36.86633885155439 39.0 35.0 41.0 32.0 41.0 44 36.80738021089439 39.0 35.0 41.0 31.0 41.0 45 36.81614817243075 39.0 35.0 41.0 32.0 41.0 46 36.69109981970169 39.0 35.0 41.0 31.0 41.0 47 36.532876577610224 39.0 35.0 40.0 31.0 41.0 48 36.52070589520844 39.0 35.0 40.0 31.0 41.0 49 36.57841446757362 39.0 35.0 40.0 31.0 41.0 50 36.463331694257775 39.0 35.0 40.0 31.0 41.0 51 35.5642004043053 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 5.0 10 13.0 11 6.0 12 5.0 13 2.0 14 9.0 15 8.0 16 21.0 17 20.0 18 64.0 19 118.0 20 265.0 21 535.0 22 875.0 23 1172.0 24 1499.0 25 1995.0 26 2515.0 27 3123.0 28 3678.0 29 4366.0 30 5600.0 31 7414.0 32 10057.0 33 14021.0 34 26560.0 35 39008.0 36 33590.0 37 52499.0 38 98304.0 39 150136.0 40 89.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.58651587171502 4.410424520570398 51.33737638638475 16.665683221329836 2 18.227175872807734 11.513522373381413 50.52242801726493 19.73687373654592 3 19.793476479265696 11.11511774026116 47.883297820029505 21.20810796044364 4 18.01781128776703 4.687537562148282 53.89695678304103 23.397694367043652 5 22.590395017210295 5.423154674097143 46.73310386275474 25.253346445937826 6 20.460252417636454 11.827787794350652 49.79118177347976 17.920778014533138 7 77.8228705676665 2.5040703709774355 14.650275911052832 5.022783150303229 8 77.30404851663661 8.23121892585915 8.752444954379063 5.71228760312517 9 71.10134950554554 6.174069824618915 10.854176910888926 11.87040375894662 10 38.84521663115336 27.59788012894061 18.473037207015246 15.083866032890784 11 32.359503906463424 24.135933999890728 24.189477134895917 19.31508495874993 12 28.893405452658033 19.728132000218544 29.388843359012185 21.989619188111238 13 24.23231164290007 24.389225809976505 31.80156258536852 19.576899961754904 14 19.450800415232475 29.362836693438233 27.619515926350875 23.56684696497842 15 16.591378462547123 24.050264983882425 38.758454898104134 20.59990165546632 16 17.9859039501721 22.9107796536087 33.325247227230506 25.778069168988686 17 18.35546085341201 23.27072064688849 31.23291263727258 27.140905862426923 18 19.426760640332187 23.606403321859805 31.822979839370596 25.143856198437415 19 22.137791618860298 26.035731847238157 28.56318636289133 23.26329017101022 20 25.719936622411627 24.477298803474838 30.756488007430477 19.04627656668306 21 24.010052996776484 27.93662241162651 27.293886248156042 20.759438343440966 22 20.4370868163689 24.980604272523628 28.615855324263784 25.966453586843684 23 21.51428727531006 27.72856908703491 27.323608151669127 23.433535485985903 24 22.676064033218598 22.973938698574003 28.750259520297217 25.59973774791018 25 19.82669507730973 27.984920504835276 26.924766431732504 25.263617986122494 26 18.81680598808938 28.360596623504343 28.41654373599956 24.406053652406708 27 20.902802819209963 27.925039610992737 28.529093591214554 22.643063978582745 28 17.352128066437196 26.501229306671036 32.40124569742665 23.745396929465116 29 21.561492651477902 23.96088072993498 29.712506146533357 24.765120472053763 30 21.0920614106977 26.30650712997869 29.570452931213463 23.030978528110147 31 22.421023875867345 28.000874173632738 23.971807900344206 25.606294050155714 32 25.57853903731629 29.959460197781784 23.071627602032454 21.390373162869476 33 22.88236901054472 26.21297055127575 24.64120635961318 26.263454078566355 34 21.464240834835817 28.498060427252366 25.282412719226354 24.75528601868546 35 20.618914931978363 26.717150193957274 26.34803037753374 26.315904496530624 36 21.449816969895647 27.98819865595804 25.134021745069113 25.4279626290772 37 21.5909960115828 26.72567338687647 29.828989783095665 21.854340818445063 38 21.724088947167132 25.51253892804458 24.338086652461346 28.425285472326937 39 25.767579085395838 25.818718242910997 25.736983008250014 22.67671966344315 40 24.194722176692345 25.629022564606895 27.909304485603453 22.266950773097307 41 17.375293667704746 28.94629295743867 25.999016554663168 27.679396820193407 42 19.992569524121727 26.801507949516473 28.05070207069879 25.155220455663006 43 22.72720319073376 23.23444244112987 26.3864940173742 27.65186035076217 44 21.896082609408293 24.035404032125882 28.280391192700648 25.788122165765177 45 21.601486095175655 23.100256788504616 25.675790853958368 29.622466262361364 46 24.15363601595367 26.3373217505327 26.11834125553188 23.39070097798175 47 18.90706441566956 24.517729333988964 32.93711413429492 23.63809211604655 48 21.175763536032342 24.188821504671367 27.729224717259466 26.906190242036825 49 20.629842102387585 22.21712287603125 32.102715401846694 25.050319619734466 50 22.021745069114353 22.661640168278424 27.830628858657054 27.485985903950173 51 18.999071190515217 23.738622083811396 25.650439818608973 31.611866907064417 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 50.0 1 200.5 2 351.0 3 829.5 4 1308.0 5 958.0 6 608.0 7 632.5 8 657.0 9 673.0 10 689.0 11 726.5 12 764.0 13 758.0 14 752.0 15 701.0 16 650.0 17 660.5 18 671.0 19 734.0 20 797.0 21 958.5 22 1120.0 23 1272.0 24 1424.0 25 1909.0 26 2802.0 27 3210.0 28 3886.0 29 4562.0 30 4973.0 31 5384.0 32 6728.5 33 8073.0 34 9902.5 35 11732.0 36 12295.5 37 12859.0 38 14439.5 39 16020.0 40 18680.0 41 21340.0 42 24300.5 43 27261.0 44 30216.5 45 33172.0 46 47721.0 47 62270.0 48 58301.0 49 54332.0 50 51227.0 51 48122.0 52 40213.5 53 32305.0 54 27354.0 55 22403.0 56 20504.5 57 18606.0 58 18076.5 59 17547.0 60 16896.5 61 16246.0 62 13723.0 63 11200.0 64 9092.5 65 6985.0 66 5682.5 67 4380.0 68 3487.0 69 2594.0 70 2319.0 71 2044.0 72 1585.5 73 1127.0 74 954.5 75 564.0 76 346.0 77 272.0 78 198.0 79 163.5 80 129.0 81 104.0 82 79.0 83 52.5 84 26.0 85 15.0 86 4.0 87 2.5 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 457575.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.8315429937557 #Duplication Level Percentage of deduplicated Percentage of total 1 71.08935555630626 21.20705166676336 2 12.147294713882191 7.247450890299959 3 4.673887872832882 4.1828786107922244 4 2.397763492892558 2.861159389083288 5 1.3523260412252123 2.0170986220192684 6 0.8700487445773776 1.5572937918313927 7 0.624199125248561 1.3034576129062005 8 0.5085615756621731 1.213694120747061 9 0.39312362278120627 1.05547358293727 >10 5.500382455485965 39.88314371391777 >50 0.3732551475052088 6.914959531082529 >100 0.05878033818979666 3.115984046337937 >500 0.0022042626821173745 0.4293903170213857 >1k 0.007347542273724582 4.369523210730639 >5k 0.0014695084547449164 2.6414408935297184 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGC 6653 1.45396929465115 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCG 5398 1.1796973173796645 No Hit GAATCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTC 4935 1.0785117193902638 RNA PCR Primer, Index 30 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTGC 2798 0.6114844561000929 RNA PCR Primer, Index 30 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTGC 2398 0.5240670928263126 Illumina Single End Adapter 2 (95% over 22bp) CTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTGCT 2149 0.4696497841883844 RNA PCR Primer, Index 30 (96% over 25bp) TCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTGC 1603 0.3503250833196744 Illumina Single End Adapter 2 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCATCGGAACT 1368 0.2989673823963285 No Hit GAATGACTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCT 1280 0.2797355624760968 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATCGGAACTCGTA 1223 0.2672785882095831 No Hit GAACTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCT 1145 0.250232202371196 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTC 1036 0.22641097087909087 No Hit TCCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTG 701 0.1531989291372999 RNA PCR Primer, Index 30 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 688 0.15035786483090205 No Hit CGCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTG 570 0.12456974266513686 RNA PCR Primer, Index 30 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4915041250068295 0.0 2 0.0 0.0 0.0 2.0943014806315903 0.0 3 0.0 0.0 0.0 2.8366934382341693 0.0 4 0.0 0.0 0.0 3.835436813637109 0.0 5 0.0 0.0 0.0 6.1950499918046225 0.0 6 0.0 0.0 0.0 7.04540239305032 0.0 7 0.0 0.0 0.0 8.082390864885538 0.0 8 0.0 0.0 0.0 9.493088564716167 0.0 9 0.0 0.0 0.0 10.1222750368792 0.0 10 0.0 0.0 0.0 12.495874993170519 0.0 11 0.0 0.0 0.0 14.359176091351145 0.0 12 0.0 0.0 0.0 17.7048571272469 0.0 13 2.1854340818445065E-4 0.0 0.0 18.40113642572256 0.0 14 2.1854340818445065E-4 0.0 0.0 18.703381959241653 0.0 15 2.1854340818445065E-4 0.0 0.0 19.353330055182212 0.0 16 2.1854340818445065E-4 0.0 0.0 20.23580833743102 0.0 17 2.1854340818445065E-4 0.0 0.0 21.36371086707097 0.0 18 2.1854340818445065E-4 0.0 0.0 22.566792329126372 0.0 19 2.1854340818445065E-4 0.0 0.0 23.661039173905916 0.0 20 2.1854340818445065E-4 0.0 0.0 24.536524067092827 0.0 21 2.1854340818445065E-4 0.0 0.0 25.58553242637819 0.0 22 2.1854340818445065E-4 0.0 0.0 26.734415123203846 0.0 23 2.1854340818445065E-4 0.0 0.0 27.746708189914223 0.0 24 2.1854340818445065E-4 0.0 0.0 28.549636671583894 0.0 25 2.1854340818445065E-4 0.0 0.0 29.26143255204065 0.0 26 2.1854340818445065E-4 0.0 0.0 29.915314429328525 0.0 27 2.1854340818445065E-4 0.0 0.0 30.54646779216522 0.0 28 2.1854340818445065E-4 0.0 0.0 31.14068731901874 0.0 29 2.1854340818445065E-4 0.0 0.0 31.74124460470961 0.0 30 2.1854340818445065E-4 0.0 0.0 32.43490138228706 0.0 31 2.1854340818445065E-4 0.0 0.0 33.11304157788341 0.0 32 2.1854340818445065E-4 0.0 0.0 33.75359230727203 0.0 33 2.1854340818445065E-4 0.0 0.0 34.40681855433535 0.0 34 2.1854340818445065E-4 0.0 0.0 35.032508331967435 0.0 35 2.1854340818445065E-4 0.0 0.0 35.67874118996886 0.0 36 2.1854340818445065E-4 0.0 0.0 36.341146260175925 0.0 37 2.1854340818445065E-4 0.0 0.0 37.00158443970934 0.0 38 2.1854340818445065E-4 0.0 0.0 37.59624105337923 0.0 39 2.1854340818445065E-4 0.0 0.0 38.21144074741846 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCAA 25 3.887112E-5 45.000004 19 CGGGTAC 50 2.1827873E-11 45.000004 6 AATCCCG 20 7.0288294E-4 45.000004 13 GATCGCC 25 3.887112E-5 45.000004 35 CGAAACG 20 7.0288294E-4 45.000004 33 CATGCGT 20 7.0288294E-4 45.000004 11 ACGTTAT 20 7.0288294E-4 45.000004 30 CGTGACA 20 7.0288294E-4 45.000004 44 GGCCGTC 20 7.0288294E-4 45.000004 8 GGCGTAG 20 7.0288294E-4 45.000004 1 GACAACG 20 7.0288294E-4 45.000004 33 GATTTCG 20 7.0288294E-4 45.000004 10 TATTGCG 25 3.887112E-5 45.000004 1 AACGGTT 20 7.0288294E-4 45.000004 36 TAGCAAC 20 7.0288294E-4 45.000004 21 AACGGCG 20 7.0288294E-4 45.000004 14 AACGGCC 20 7.0288294E-4 45.000004 37 ATATCAC 110 0.0 45.000004 30 TACGCGG 25 3.887112E-5 45.000004 2 AGGCCGT 20 7.0288294E-4 45.000004 7 >>END_MODULE