##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933926.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 370312 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.389250145822984 33.0 31.0 34.0 31.0 34.0 2 32.609024282226876 34.0 31.0 34.0 31.0 34.0 3 32.66244950204152 34.0 31.0 34.0 31.0 34.0 4 36.0490046231286 37.0 35.0 37.0 35.0 37.0 5 36.09172265549051 37.0 35.0 37.0 35.0 37.0 6 35.73725399122902 37.0 35.0 37.0 35.0 37.0 7 36.06309544384195 37.0 35.0 37.0 35.0 37.0 8 36.06896346864266 37.0 36.0 37.0 35.0 37.0 9 37.863207241461254 39.0 38.0 39.0 35.0 39.0 10 37.57166389422973 39.0 37.0 39.0 35.0 39.0 11 37.513980103264274 39.0 37.0 39.0 35.0 39.0 12 37.24859577869472 39.0 37.0 39.0 35.0 39.0 13 37.064037892371836 39.0 37.0 39.0 33.0 39.0 14 38.24447492924885 40.0 37.0 41.0 33.0 41.0 15 38.35545431960077 40.0 37.0 41.0 34.0 41.0 16 38.42894100110178 40.0 37.0 41.0 34.0 41.0 17 38.42159314307935 40.0 37.0 41.0 34.0 41.0 18 38.398847458359434 40.0 37.0 41.0 34.0 41.0 19 38.41190401607293 40.0 37.0 41.0 34.0 41.0 20 38.36917788243427 40.0 37.0 41.0 34.0 41.0 21 38.27342889239344 40.0 37.0 41.0 34.0 41.0 22 38.24817451230314 40.0 37.0 41.0 34.0 41.0 23 38.221194560262695 40.0 36.0 41.0 34.0 41.0 24 38.1769291840394 40.0 36.0 41.0 34.0 41.0 25 38.0871292315669 40.0 36.0 41.0 34.0 41.0 26 38.01078549979477 40.0 36.0 41.0 34.0 41.0 27 37.981766726436085 40.0 36.0 41.0 34.0 41.0 28 37.89110263777572 40.0 36.0 41.0 34.0 41.0 29 37.79636630733003 40.0 36.0 41.0 34.0 41.0 30 37.75989435935104 40.0 36.0 41.0 34.0 41.0 31 37.682654086283996 40.0 36.0 41.0 33.0 41.0 32 37.5515538248828 40.0 35.0 41.0 33.0 41.0 33 37.49232809090713 40.0 35.0 41.0 33.0 41.0 34 37.513602043682084 40.0 35.0 41.0 33.0 41.0 35 37.400116658385365 40.0 35.0 41.0 33.0 41.0 36 37.316497980081664 39.0 35.0 41.0 33.0 41.0 37 37.201981032210675 39.0 35.0 41.0 32.0 41.0 38 37.103952882974355 39.0 35.0 41.0 32.0 41.0 39 37.060783879539414 39.0 35.0 41.0 32.0 41.0 40 37.034781481561495 39.0 35.0 41.0 32.0 41.0 41 37.01886787357687 39.0 35.0 41.0 32.0 41.0 42 37.023998682192314 39.0 35.0 41.0 32.0 41.0 43 36.854898031929835 39.0 35.0 41.0 32.0 41.0 44 36.661061483289764 39.0 35.0 41.0 31.0 41.0 45 36.6231826135799 39.0 35.0 41.0 31.0 41.0 46 36.54337693620515 39.0 35.0 40.0 31.0 41.0 47 36.415933051048846 38.0 35.0 40.0 31.0 41.0 48 36.30407332195554 38.0 35.0 40.0 31.0 41.0 49 36.239030871265314 38.0 35.0 40.0 31.0 41.0 50 36.07951403141135 38.0 35.0 40.0 31.0 41.0 51 35.11556201257318 36.0 34.0 39.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 7.0 10 12.0 11 7.0 12 7.0 13 3.0 14 6.0 15 4.0 16 11.0 17 12.0 18 40.0 19 69.0 20 152.0 21 300.0 22 421.0 23 598.0 24 953.0 25 1362.0 26 1994.0 27 2556.0 28 2900.0 29 3533.0 30 4479.0 31 5898.0 32 7718.0 33 11502.0 34 23212.0 35 37301.0 36 27444.0 37 43744.0 38 82422.0 39 111558.0 40 83.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.989500745317464 4.68496835101212 54.53050400743157 16.795026896238845 2 19.434152822484823 4.939618483873058 52.65613860744453 22.970090086197583 3 20.852416340815314 4.282334895979607 52.496273412689845 22.368975350515242 4 19.642085592689405 4.407364600661064 50.738026312946914 25.21252349370261 5 18.161982328414958 6.113493486573484 50.69697984402342 25.02754434098814 6 21.484315928190284 6.465358940569034 52.700695629631234 19.349629501609453 7 82.41077793860312 2.3831255805915013 9.584620536196505 5.6214759446088705 8 82.75346194560262 3.039058955691417 8.01351292963771 6.193966169068245 9 75.22953617490117 6.479671196180519 11.802750113417874 6.488042515500443 10 38.19238912052539 27.261876471731945 19.397427034500637 15.148307373242023 11 31.578776815226078 25.27490332476398 24.34352653978267 18.802793320227266 12 29.71008230897189 21.443809544384195 28.45033377260256 20.39577437404135 13 23.382445073343558 26.811715526366957 30.443247855862083 19.362591544427403 14 18.51276761217568 30.159973211778173 29.130030892868714 22.197228283177427 15 15.61035019119013 25.653773034630255 38.27691244140076 20.458964332778844 16 17.150672946056297 24.756691654604765 34.95349867139061 23.139136727948326 17 17.578420359048586 24.5754930977122 29.796765970316923 28.049320572922294 18 19.74092116917626 24.12722245025816 32.86498952234872 23.266866858216854 19 22.848030849661907 26.352913219123337 29.882909546544532 20.916146384670224 20 25.84496316619499 26.02697185076368 28.505692497137545 19.622372485903778 21 22.855321998747 27.627514096221567 29.003650975393725 20.513512929637713 22 20.81028970165698 25.82362980405712 27.289690855278792 26.076389639007107 23 20.123571474864438 27.36854328242131 26.754196461362312 25.75368878135194 24 22.16455313357385 23.25066430469442 30.35116334334291 24.233619218388817 25 19.161949923307915 25.75395882391065 29.11490850958111 25.96918274320033 26 20.559960249735358 28.547009008619757 27.476020220786797 23.417010520858085 27 22.607963014971162 28.495430879906674 27.85137937738988 21.04522672773229 28 21.038475663764608 25.86872691136123 31.70839724340556 21.3844001814686 29 20.08036466547128 23.661939121605567 32.29249929788935 23.96519691503381 30 23.173702175462854 26.117976193048026 27.594298861500572 23.11402276998855 31 23.752673421331203 28.064983041327313 26.03615329775973 22.14619023958176 32 24.03000712912355 28.087666616258723 26.533571690898484 21.34875456371924 33 24.24739138888289 27.663699799088338 25.891140443733935 22.19776836829484 34 21.53508392922725 25.687258311909954 28.104139212339863 24.67351854652293 35 21.406273628723888 24.041348916589257 28.60155760547862 25.950819849208234 36 25.75746937717384 25.037535915660307 26.595411436842447 22.6095832703234 37 23.541230097863423 26.999935189785912 29.375769621292314 20.08306509105835 38 20.26858432889023 27.492222774309234 29.39035191946251 22.84884097733803 39 20.296668754995785 26.968340210417164 29.537795156516665 23.197195878070385 40 22.289042753137895 25.78123312234008 28.788427056104045 23.14129706841798 41 19.039620644213528 26.156592278943165 28.35149819611571 26.452288880727604 42 22.879625829030655 25.523612521333362 27.503564561774933 24.093197087861046 43 24.684050206312516 23.81073257145326 27.82464516407786 23.680572058156365 44 22.10190325995377 24.603847566376462 27.59483894661799 25.699410227051782 45 21.602324526345352 25.019983149344338 26.456069476549505 26.92162284776081 46 23.03219987470025 24.73967897340621 29.023904167296767 23.204216984596773 47 20.380651990753744 25.512540776426363 30.626876795783016 23.479930437036877 48 20.82703234029683 22.9482166389423 31.391367279483244 24.833383741277625 49 21.86696623387846 22.023320875369958 31.955756227181404 24.153956663570177 50 21.03874570632332 23.10322106764026 29.529423837196745 26.32860938883968 51 19.327756054354168 23.59847912030936 27.175192810386918 29.898572014949554 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 27.0 1 151.5 2 276.0 3 642.5 4 1009.0 5 723.5 6 438.0 7 464.0 8 490.0 9 566.0 10 642.0 11 687.0 12 732.0 13 729.5 14 727.0 15 699.0 16 671.0 17 599.0 18 527.0 19 527.5 20 528.0 21 631.0 22 734.0 23 1003.0 24 1272.0 25 1516.5 26 2357.5 27 2954.0 28 3287.0 29 3620.0 30 4464.0 31 5308.0 32 6434.5 33 7561.0 34 8147.5 35 8734.0 36 9890.5 37 11047.0 38 11586.5 39 12126.0 40 15550.0 41 18974.0 42 22055.0 43 25136.0 44 27838.0 45 30540.0 46 34587.5 47 38635.0 48 43454.0 49 48273.0 50 45925.5 51 43578.0 52 36334.0 53 29090.0 54 24401.5 55 19713.0 56 17112.5 57 14512.0 58 13176.0 59 11840.0 60 10785.0 61 9730.0 62 8377.0 63 7024.0 64 5699.0 65 4374.0 66 3576.0 67 2778.0 68 2389.5 69 2001.0 70 1545.0 71 1089.0 72 928.5 73 768.0 74 647.5 75 366.0 76 205.0 77 184.0 78 163.0 79 128.0 80 93.0 81 85.0 82 77.0 83 41.5 84 6.0 85 3.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 370312.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.157256118127094 #Duplication Level Percentage of deduplicated Percentage of total 1 65.69740053093794 18.498585330447987 2 14.477884487785882 8.153150031424927 3 5.944996717503252 5.021843855884918 4 3.0639686846236023 3.4509180396347103 5 1.7545256571943606 2.4701314147723434 6 1.1380261435798384 1.9226216156341194 7 0.7626526191567655 1.503194358873024 8 0.6033499455079121 1.3590943155619446 9 0.43110625583397527 1.0924892333679659 >10 5.303701590274937 37.03361502100929 >50 0.7317853694759402 12.59376153729147 >100 0.08263698730136466 3.6769533718388114 >500 0.00398250541211396 0.7431841558969723 >1k 0.00398250541211396 2.480457718361528 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGGGTCATATCGTATGCCGTCTTCTGC 2800 0.7561191643803064 Illumina PCR Primer Index 7 (95% over 23bp) CTGTCTCTTATACACATCTGACGCGGGTCATATCGTATGCCGTCTTCTGCT 2323 0.627308863876947 Illumina PCR Primer Index 7 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCGGGTCATATCGTATGCCGTCTTCTGC 1964 0.5303635853010434 Illumina PCR Primer Index 7 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCGGGTCATATCGTATGCCGTCTTCTGC 1761 0.47554494588347124 Illumina PCR Primer Index 7 (95% over 23bp) TCCTGTCTCTTATACACATCTGACGCGGGTCATATCGTATGCCGTCTTCTG 860 0.23223660048823694 Illumina PCR Primer Index 7 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCGGGTCATATCGTATGCCGTCTTCTG 627 0.16931668430944716 Illumina PCR Primer Index 7 (95% over 22bp) GCCTGTCTCTTATACACATCTGACGCGGGTCATATCGTATGCCGTCTTCTG 584 0.1577048542850353 Illumina PCR Primer Index 7 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 580 0.15662468405020633 No Hit TGCTGTCTCTTATACACATCTGACGCGGGTCATATCGTATGCCGTCTTCTG 420 0.11341787465704595 Illumina PCR Primer Index 7 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6564734602173302 0.0 2 0.0 0.0 0.0 2.572425414245285 0.0 3 0.0 0.0 0.0 3.669338287714144 0.0 4 0.0 0.0 0.0 4.639331158590594 0.0 5 0.0 0.0 0.0 6.255265829894792 0.0 6 0.0 0.0 0.0 7.265495042018622 0.0 7 0.0 0.0 0.0 8.198762124910886 0.0 8 0.0 0.0 0.0 9.870325563308777 0.0 9 0.0 0.0 0.0 10.75444490051632 0.0 10 0.0 0.0 0.0 12.223746462442481 0.0 11 0.0 0.0 0.0 14.653589405690337 0.0 12 0.0 0.0 0.0 16.764242044546222 0.0 13 0.0 0.0 0.0 17.484985633735878 0.0 14 0.0 0.0 0.0 17.72235304283955 0.0 15 0.0 0.0 0.0 18.104193220851606 0.0 16 2.7004255870725224E-4 0.0 0.0 19.00721553716866 0.0 17 2.7004255870725224E-4 0.0 0.0 20.2934282442913 0.0 18 5.400851174145045E-4 0.0 0.0 21.91206334118257 0.0 19 5.400851174145045E-4 0.0 0.0 22.79267212512692 0.0 20 5.400851174145045E-4 0.0 0.0 23.791829592343753 0.0 21 5.400851174145045E-4 0.0 0.0 25.05400851174145 0.0 22 5.400851174145045E-4 0.0 0.0 26.261368791721576 0.0 23 5.400851174145045E-4 0.0 0.0 27.444695283976756 0.0 24 5.400851174145045E-4 0.0 0.0 28.345557259824147 0.0 25 5.400851174145045E-4 0.0 0.0 29.16594655317678 0.0 26 5.400851174145045E-4 0.0 0.0 29.83808248179913 0.0 27 5.400851174145045E-4 0.0 0.0 30.498336537838362 0.0 28 5.400851174145045E-4 0.0 0.0 31.16669187063881 0.0 29 5.400851174145045E-4 0.0 0.0 31.946844822744065 0.0 30 5.400851174145045E-4 0.0 0.0 32.7747953077405 0.0 31 5.400851174145045E-4 0.0 0.0 33.57655166454233 0.0 32 5.400851174145045E-4 0.0 0.0 34.32078895633952 0.0 33 5.400851174145045E-4 0.0 0.0 35.00075611916438 0.0 34 5.400851174145045E-4 0.0 0.0 35.70232668668582 0.0 35 5.400851174145045E-4 0.0 0.0 36.429551297284455 0.0 36 5.400851174145045E-4 0.0 0.0 37.11032858778543 0.0 37 5.400851174145045E-4 0.0 0.0 37.8089286871611 0.0 38 5.400851174145045E-4 0.0 0.0 38.472693296463525 0.0 39 5.400851174145045E-4 0.0 0.0 39.132947352502754 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGACCTA 30 2.1615015E-6 45.000004 29 ACCTAAG 30 2.1615015E-6 45.000004 31 GTTAAGG 30 2.1615015E-6 45.000004 28 GAGCGTA 30 2.1615015E-6 45.000004 9 CGGGCCC 30 2.1615015E-6 45.000004 6 CGGGCAA 30 2.1615015E-6 45.000004 6 GTCCCGT 30 2.1615015E-6 45.000004 18 GGCGCTA 30 2.1615015E-6 45.000004 7 TTGTTCG 30 2.1615015E-6 45.000004 1 TTCATCG 60 0.0 45.000004 15 CTTGTCG 20 7.0270867E-4 45.0 1 CTCACGG 25 3.8856677E-5 45.0 2 TCGTTAG 40 6.7939254E-9 45.0 1 CCGGGTA 20 7.0270867E-4 45.0 5 CCGGGAT 40 6.7939254E-9 45.0 5 GGTAATT 20 7.0270867E-4 45.0 8 CGTGCTC 20 7.0270867E-4 45.0 29 GCGGTCA 25 3.8856677E-5 45.0 14 CTATCGG 20 7.0270867E-4 45.0 2 CGGCATA 20 7.0270867E-4 45.0 27 >>END_MODULE