##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933923.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 803057 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.43190333936445 33.0 31.0 34.0 31.0 34.0 2 32.65704551482647 34.0 31.0 34.0 31.0 34.0 3 32.71186105095902 34.0 31.0 34.0 31.0 34.0 4 36.08640980652681 37.0 35.0 37.0 35.0 37.0 5 36.12318054633731 37.0 35.0 37.0 35.0 37.0 6 35.73513710732862 37.0 35.0 37.0 35.0 37.0 7 36.071774481761565 37.0 35.0 37.0 35.0 37.0 8 36.07238465015559 37.0 36.0 37.0 35.0 37.0 9 37.973837473554184 39.0 39.0 39.0 35.0 39.0 10 37.56719012473585 39.0 37.0 39.0 35.0 39.0 11 37.51781878496794 39.0 37.0 39.0 35.0 39.0 12 37.37913622569755 39.0 37.0 39.0 35.0 39.0 13 37.36157707360748 39.0 37.0 39.0 35.0 39.0 14 38.64603135269352 40.0 38.0 41.0 35.0 41.0 15 38.69012535847393 40.0 38.0 41.0 35.0 41.0 16 38.75519172362609 40.0 38.0 41.0 35.0 41.0 17 38.705580052225436 40.0 38.0 41.0 35.0 41.0 18 38.66852290684223 40.0 38.0 41.0 35.0 41.0 19 38.67494088215407 40.0 38.0 41.0 35.0 41.0 20 38.61497253619606 40.0 38.0 41.0 35.0 41.0 21 38.54933958610659 40.0 38.0 41.0 34.0 41.0 22 38.56096889760005 40.0 38.0 41.0 35.0 41.0 23 38.498812662114894 40.0 38.0 41.0 34.0 41.0 24 38.46015164552454 40.0 38.0 41.0 34.0 41.0 25 38.375441593809654 40.0 37.0 41.0 34.0 41.0 26 38.29674232339672 40.0 37.0 41.0 34.0 41.0 27 38.28943524556787 40.0 37.0 41.0 34.0 41.0 28 38.226439717230534 40.0 37.0 41.0 34.0 41.0 29 38.21985612478317 40.0 37.0 41.0 34.0 41.0 30 38.18896915162934 40.0 37.0 41.0 34.0 41.0 31 38.14594107267604 40.0 37.0 41.0 34.0 41.0 32 38.05339222496037 40.0 37.0 41.0 34.0 41.0 33 37.9796577328882 40.0 37.0 41.0 34.0 41.0 34 37.93895701052354 40.0 37.0 41.0 34.0 41.0 35 37.88759452940451 40.0 37.0 41.0 33.0 41.0 36 37.839248023490235 40.0 37.0 41.0 33.0 41.0 37 37.812546307422764 40.0 37.0 41.0 33.0 41.0 38 37.789712311828424 40.0 37.0 41.0 33.0 41.0 39 37.74742390639768 40.0 37.0 41.0 33.0 41.0 40 37.67233583668407 40.0 36.0 41.0 33.0 41.0 41 37.54643568264768 40.0 36.0 41.0 33.0 41.0 42 37.51139831917286 40.0 36.0 41.0 33.0 41.0 43 37.40271612102254 40.0 36.0 41.0 33.0 41.0 44 37.31865857591678 40.0 36.0 41.0 33.0 41.0 45 37.328969176534166 40.0 35.0 41.0 33.0 41.0 46 37.24901719305105 39.0 35.0 41.0 32.0 41.0 47 37.15536257077642 39.0 35.0 41.0 32.0 41.0 48 37.12074236324445 39.0 35.0 41.0 32.0 41.0 49 37.10798859856772 39.0 35.0 41.0 32.0 41.0 50 37.0252422928883 39.0 35.0 41.0 32.0 41.0 51 36.08995500942025 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 11.0 10 10.0 11 8.0 12 8.0 13 8.0 14 11.0 15 11.0 16 17.0 17 42.0 18 85.0 19 164.0 20 290.0 21 525.0 22 870.0 23 1363.0 24 1905.0 25 2676.0 26 3698.0 27 4382.0 28 5473.0 29 6495.0 30 8423.0 31 11199.0 32 14822.0 33 21115.0 34 39099.0 35 57177.0 36 53849.0 37 86030.0 38 174401.0 39 308660.0 40 225.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.58774034719827 4.650852928247932 57.853178541498295 13.908228183055499 2 18.98545184214819 5.9115355447994355 54.73932734538146 20.36368526767091 3 19.374465324379216 6.160334820566908 52.7155606638134 21.749639191240473 4 18.091990979469703 4.52159684804441 54.1225591707687 23.263853001717187 5 18.802774896427028 5.6807922725286 51.55536904603285 23.961063785011525 6 19.69623575910552 7.351532954696864 55.169309276925546 17.78292200927207 7 84.22714701447094 1.822162063215936 9.604673142753255 4.3460177795598565 8 86.819366495778 3.156687507860588 5.992849822615332 4.031096173746073 9 82.0793542675053 4.219999327569525 7.7791489271620815 5.921497477763098 10 38.09106950067056 26.471221843530408 18.56680160935027 16.870907046448757 11 28.723365838290434 26.918139061112722 24.289807572812393 20.068687527784455 12 24.51158510541593 22.673359425296088 30.182415444980865 22.632640024307115 13 23.572548399428683 23.68686158018671 32.13370906423828 20.606880956146327 14 20.899761785278006 25.983460700797078 30.79233479068111 22.324442723243802 15 18.630682504479758 25.59643960515879 33.98787383709998 21.785004053261474 16 20.1942078831266 25.028484902067973 31.443845206504644 23.33346200830078 17 20.349987609845876 26.50235288404186 29.122963874295348 24.02469563181692 18 21.854613059845068 26.115829885051745 30.53257738865361 21.49697966644958 19 22.890529563903932 27.856055049641558 28.10522789789517 21.14818748855934 20 24.139133336736993 27.026724130416646 29.190455970124162 19.6436865627222 21 23.546398325399068 28.49523757342256 28.10958624356677 19.8487778576116 22 22.293187158570312 25.111044421504324 28.61826744552379 23.97750097440157 23 21.324389177854126 26.90195092004677 27.891419911662556 23.882239990436542 24 21.39599057103045 25.625329210753407 29.331043749073853 23.64763646914229 25 20.447365504565678 28.63682154566861 26.489277847027047 24.42653510273866 26 19.117322929754675 29.149861093297236 28.04757321086797 23.685242766080115 27 20.605137617877688 28.2018586476427 27.637515145251207 23.55548858922841 28 19.06116253267203 27.336540245586555 30.446157620193837 23.156139601547586 29 20.39917465385396 25.100584391892482 29.024838834603273 25.475402119650287 30 21.441939986825343 27.173164544982487 27.891793484148696 23.493101984043474 31 22.69714354024683 27.402413527308774 26.747665483272048 23.15277744917235 32 22.686185413986802 28.612788382393777 25.733540707571194 22.967485496048226 33 21.785253101585567 26.927851945752295 25.903142616277545 25.38375233638459 34 21.026527382240612 26.411201197424344 27.81433945535622 24.747931964978825 35 19.79660223371442 26.63795969650971 27.7381306681842 25.82730740159167 36 20.74908754920261 28.68625763800079 26.13836875838203 24.426286054414568 37 21.158772042333236 27.75207737433333 28.51441429437761 22.574736288955826 38 22.04936884928467 26.68229029819801 27.850326938187454 23.418013914329865 39 22.289326909546894 26.040243718689954 28.25042307084055 23.420006300922598 40 20.643117487301648 25.062355474144425 30.046933156675053 24.24759388187887 41 18.37217034407271 26.752397401429782 30.376299565286153 24.49913268921135 42 19.87505245580326 26.760989568610942 29.14450655432927 24.219451421256526 43 21.25191611554348 27.0265996062546 27.30727706750579 24.414207210696127 44 21.3988546267575 25.442901313356337 26.872936790290105 26.28530726959606 45 21.135361499868626 25.25623959444971 26.35130507548032 27.257093830201345 46 21.94987404381009 25.955193716012687 27.394319456775797 24.700612783401425 47 19.361514811526455 25.886082806077276 30.241564421952617 24.510837960443656 48 20.575874439796927 24.465386641296945 29.653436804610383 25.305302114295745 49 21.592863271224832 23.99543245373616 30.06361939438919 24.348084880649818 50 21.408941083883214 23.009450138657655 28.857478360813744 26.72413041664539 51 19.397626818519733 23.227865518885956 28.3123115793773 29.062196083217007 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 102.0 1 337.0 2 572.0 3 1351.5 4 2131.0 5 1505.0 6 879.0 7 879.0 8 879.0 9 928.0 10 977.0 11 1115.0 12 1253.0 13 1257.5 14 1262.0 15 1274.0 16 1286.0 17 1332.0 18 1378.0 19 1475.5 20 1573.0 21 1701.0 22 1829.0 23 2206.0 24 2583.0 25 3257.0 26 5344.5 27 6758.0 28 7859.5 29 8961.0 30 11492.0 31 14023.0 32 15905.5 33 17788.0 34 19758.5 35 21729.0 36 24995.5 37 28262.0 38 30587.5 39 32913.0 40 36372.5 41 39832.0 42 45449.0 43 51066.0 44 57116.0 45 63166.0 46 74879.0 47 86592.0 48 91001.0 49 95410.0 50 90586.0 51 85762.0 52 74403.0 53 63044.0 54 54093.5 55 45143.0 56 40071.5 57 35000.0 58 30780.5 59 26561.0 60 24307.0 61 22053.0 62 17928.5 63 13804.0 64 11604.0 65 9404.0 66 7667.5 67 5931.0 68 4646.5 69 3362.0 70 2944.5 71 2527.0 72 1959.0 73 1391.0 74 1256.0 75 775.5 76 430.0 77 321.5 78 213.0 79 146.0 80 79.0 81 66.0 82 53.0 83 27.5 84 2.0 85 18.0 86 34.0 87 19.0 88 4.0 89 2.5 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 803057.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.58055437844782 #Duplication Level Percentage of deduplicated Percentage of total 1 71.22275208056365 23.204767471435115 2 12.056714500343944 7.856288848077525 3 4.5417135379747995 4.439146346859618 4 2.2142206077240743 2.885621396633359 5 1.3903544693897125 2.2649259697634747 6 0.9542673814648059 1.8654336188035872 7 0.7018530596353296 1.6006733242590185 8 0.5632680443130178 1.4681268117905786 9 0.4427618491867338 1.2982883853717444 >10 5.55186134190428 41.4084974445249 >50 0.30374114534594143 6.0374759193904035 >100 0.050301079999896296 2.7551372472011164 >500 0.0030954510769166926 0.6308262084188688 >1k 0.0030954510769166926 2.2847910074707394 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGC 2852 0.35514291015457183 No Hit CTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTCTGCT 2659 0.3311097468797358 TruSeq Adapter, Index 22 (95% over 22bp) GAATCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTC 2596 0.3232647246708515 No Hit CCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTCTGC 2407 0.2997296580441986 TruSeq Adapter, Index 20 (95% over 22bp) GAATGATACCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCG 2260 0.28142460622346854 No Hit TCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTCTGC 2145 0.26710432758820357 TruSeq Adapter, Index 20 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTCTGC 2082 0.2592593053793193 TruSeq Adapter, Index 20 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1123 0.1398406339774138 No Hit TCCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTCTG 955 0.11892057475372234 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.490483240915651E-4 0.0 0.0 0.35501838599252605 0.0 2 2.490483240915651E-4 0.0 0.0 1.263297623954464 0.0 3 2.490483240915651E-4 0.0 0.0 1.8511761929726034 0.0 4 2.490483240915651E-4 0.0 0.0 2.538175994979186 0.0 5 2.490483240915651E-4 0.0 0.0 3.84368730986717 0.0 6 2.490483240915651E-4 0.0 0.0 4.655086749757489 0.0 7 2.490483240915651E-4 0.0 0.0 5.403227915328551 0.0 8 2.490483240915651E-4 0.0 0.0 6.63713783704021 0.0 9 2.490483240915651E-4 0.0 0.0 7.23946120885566 0.0 10 2.490483240915651E-4 0.0 0.0 8.634380872092516 0.0 11 2.490483240915651E-4 0.0 0.0 10.536736495665936 0.0 12 3.735724861373477E-4 0.0 0.0 12.663858231731995 0.0 13 4.980966481831302E-4 0.0 0.0 13.277015205645428 0.0 14 4.980966481831302E-4 0.0 0.0 13.482355548858923 0.0 15 4.980966481831302E-4 0.0 0.0 13.798522396293166 0.0 16 4.980966481831302E-4 0.0 0.0 14.438576589208488 0.0 17 4.980966481831302E-4 0.0 0.0 15.375496384440956 0.0 18 4.980966481831302E-4 0.0 0.0 16.42174839394962 0.0 19 4.980966481831302E-4 0.0 0.0 17.222812328390138 0.0 20 4.980966481831302E-4 0.0 0.0 18.018272675538597 0.0 21 4.980966481831302E-4 0.0 0.0 19.233753021267482 0.0 22 6.226208102289128E-4 0.0 0.0 20.558441057110517 0.0 23 6.226208102289128E-4 0.0 0.0 21.79222645466013 0.0 24 6.226208102289128E-4 0.0 0.0 22.68543826901453 0.0 25 6.226208102289128E-4 0.0 0.0 23.45948046029111 0.0 26 6.226208102289128E-4 0.0 0.0 24.138137143440627 0.0 27 6.226208102289128E-4 0.0 0.0 24.78964755926416 0.0 28 6.226208102289128E-4 0.0 0.0 25.52932108181611 0.0 29 6.226208102289128E-4 0.0 0.0 26.273601998363752 0.0 30 6.226208102289128E-4 0.0 0.0 27.091227646356362 0.0 31 6.226208102289128E-4 0.0 0.0 27.8798391645923 0.0 32 6.226208102289128E-4 0.0 0.0 28.633334869131332 0.0 33 6.226208102289128E-4 0.0 0.0 29.34499045522298 0.0 34 6.226208102289128E-4 0.0 0.0 30.036597651225257 0.0 35 6.226208102289128E-4 0.0 0.0 30.781750236907218 0.0 36 6.226208102289128E-4 0.0 0.0 31.51843517957007 0.0 37 6.226208102289128E-4 0.0 0.0 32.22237026761488 0.0 38 6.226208102289128E-4 0.0 0.0 32.93128632214152 0.0 39 6.226208102289128E-4 0.0 0.0 33.647424778066814 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGCTT 20 7.032015E-4 45.000004 43 TGGCACG 20 7.032015E-4 45.000004 32 GACGGTC 20 7.032015E-4 45.000004 9 CTCGAGT 20 7.032015E-4 45.000004 27 CAGTCGA 20 7.032015E-4 45.000004 28 ATCATCG 30 2.164681E-6 45.000004 23 TTATCCG 25 3.8897517E-5 45.0 1 TCGTGCG 25 3.8897517E-5 45.0 1 ACGCTCC 25 3.8897517E-5 45.0 25 GCGATAT 25 3.8897517E-5 45.0 9 CGACTAC 25 3.8897517E-5 45.0 45 CGCTTCA 25 3.8897517E-5 45.0 11 CCCGATC 25 3.8897517E-5 45.0 41 TCGCTTG 235 0.0 42.12766 1 GTATCGG 65 0.0 41.53846 2 ACGAGCG 60 3.6379788E-12 41.250004 42 CGTTTTT 865 0.0 41.098267 1 TATTGCG 50 1.0804797E-9 40.5 1 TATCCGG 100 0.0 40.5 2 ACCGGGT 45 1.9270374E-8 40.0 4 >>END_MODULE