##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933918.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 991273 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.34787994830889 33.0 31.0 34.0 31.0 34.0 2 32.57749782350574 34.0 31.0 34.0 31.0 34.0 3 32.61474891377048 34.0 31.0 34.0 31.0 34.0 4 36.01866488848178 37.0 35.0 37.0 35.0 37.0 5 36.077758599296054 37.0 35.0 37.0 35.0 37.0 6 35.74640588415099 37.0 35.0 37.0 35.0 37.0 7 36.0847132929072 37.0 35.0 37.0 35.0 37.0 8 36.09917853104039 37.0 36.0 37.0 35.0 37.0 9 37.95348002013572 39.0 39.0 39.0 35.0 39.0 10 37.51835569010757 39.0 37.0 39.0 35.0 39.0 11 37.4376191019023 39.0 37.0 39.0 35.0 39.0 12 37.36198706108206 39.0 37.0 39.0 35.0 39.0 13 37.37492497021507 39.0 37.0 39.0 35.0 39.0 14 38.63276917660423 40.0 38.0 41.0 35.0 41.0 15 38.669926448112676 40.0 38.0 41.0 35.0 41.0 16 38.70196908419779 40.0 38.0 41.0 35.0 41.0 17 38.67859610823658 40.0 38.0 41.0 35.0 41.0 18 38.62288996068691 40.0 38.0 41.0 35.0 41.0 19 38.6109205032317 40.0 38.0 41.0 35.0 41.0 20 38.544629985886836 40.0 38.0 41.0 34.0 41.0 21 38.45789000608309 40.0 38.0 41.0 34.0 41.0 22 38.461952459110655 40.0 38.0 41.0 34.0 41.0 23 38.39127263629696 40.0 38.0 41.0 34.0 41.0 24 38.35820202910803 40.0 37.0 41.0 34.0 41.0 25 38.27421911017449 40.0 37.0 41.0 34.0 41.0 26 38.203508014442036 40.0 37.0 41.0 34.0 41.0 27 38.22932128687052 40.0 37.0 41.0 34.0 41.0 28 38.16813834332217 40.0 37.0 41.0 34.0 41.0 29 38.17203434371763 40.0 37.0 41.0 34.0 41.0 30 38.09528656586026 40.0 37.0 41.0 34.0 41.0 31 38.039219266539085 40.0 37.0 41.0 34.0 41.0 32 37.92745691651039 40.0 37.0 41.0 34.0 41.0 33 37.838607527895945 40.0 37.0 41.0 33.0 41.0 34 37.80057562346599 40.0 37.0 41.0 33.0 41.0 35 37.72238929134557 40.0 37.0 41.0 33.0 41.0 36 37.62930897946378 40.0 37.0 41.0 33.0 41.0 37 37.58446764917434 40.0 37.0 41.0 33.0 41.0 38 37.541532958125565 40.0 37.0 41.0 33.0 41.0 39 37.46408204399797 40.0 36.0 41.0 33.0 41.0 40 37.39661021736696 40.0 36.0 41.0 33.0 41.0 41 37.31569708849126 40.0 36.0 41.0 33.0 41.0 42 37.27730201468213 40.0 36.0 41.0 32.0 41.0 43 37.1925423167987 40.0 36.0 41.0 32.0 41.0 44 37.09753518959963 39.0 36.0 41.0 32.0 41.0 45 37.10622401699633 39.0 36.0 41.0 32.0 41.0 46 37.03124769866626 39.0 35.0 41.0 32.0 41.0 47 36.989667831162556 39.0 35.0 41.0 32.0 41.0 48 36.92355082807663 39.0 35.0 41.0 31.0 41.0 49 36.90964951128498 39.0 35.0 41.0 31.0 41.0 50 36.838875869715004 39.0 35.0 41.0 31.0 41.0 51 35.926558072296935 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 9.0 10 13.0 11 11.0 12 9.0 13 9.0 14 4.0 15 13.0 16 22.0 17 61.0 18 103.0 19 213.0 20 388.0 21 616.0 22 1106.0 23 1637.0 24 2673.0 25 4472.0 26 6536.0 27 7616.0 28 7983.0 29 9317.0 30 11272.0 31 14097.0 32 18823.0 33 26569.0 34 46221.0 35 64328.0 36 70091.0 37 110766.0 38 223046.0 39 363040.0 40 208.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.022921031844913 4.799686867290847 58.71752786568383 13.459864235180419 2 20.637402612600162 4.103208702345368 54.00399284556323 21.25539583949124 3 19.765392581054865 4.310316128856531 53.71123797379733 22.213053316291273 4 17.82990155083413 4.613360799698973 53.55315841347439 24.003579235992508 5 17.746372593624564 5.53671894624387 53.425342968082454 23.291565492049113 6 20.561137042974035 6.125557742418083 55.20759669636921 18.105708518238668 7 83.37370229997185 1.7392786850847344 10.175098080952472 4.711920933990939 8 85.80905562846965 2.0056028964775594 7.621613823840658 4.563727651212128 9 80.32519800297193 4.936379786395877 9.818990328597673 4.919431882034515 10 35.569918680323184 31.559116408900472 18.741860214088348 14.129104696687996 11 25.312300445992175 26.255330267242222 28.430210446567195 20.002158840198412 12 22.2862924744243 22.84002489727855 32.95731851871281 21.916364109584343 13 22.619903901347055 24.419912577060003 33.46827765913124 19.491905862461703 14 20.912200776173666 26.23475066908914 31.54569931794773 21.30734923678946 15 18.395336098128368 26.170590745435412 34.17252361357567 21.261549542860543 16 19.965741021898104 26.60256054588393 31.814343778151933 21.617354654066034 17 20.415062248240393 26.4599156841758 29.461107081500256 23.66391498608355 18 20.964557695004302 26.129532429512352 31.49011422685779 21.415795648625554 19 21.70895404192387 28.37069102053622 28.87307532839087 21.047279609149044 20 22.956945261295324 27.928834942543578 29.439922201048553 19.67429759511255 21 22.735815461532795 28.257402350311168 29.521837072128466 19.48494511602757 22 22.15202068451375 25.53131175770953 29.07291936731859 23.243748190458128 23 20.474884315420677 27.652927094755935 28.144517201618523 23.72767138820486 24 21.44545448125794 26.398176889716556 29.24290281284772 22.913465816177784 25 20.118070400384152 27.959099057474578 27.34857097893315 24.574259563208116 26 19.145886148417237 28.817591117684028 28.040206885489667 23.99631584840907 27 19.8056438539131 27.63335630043389 28.50486193006366 24.05613791558935 28 18.278920136027107 26.7193800295176 30.708694779339297 24.293005055115994 29 19.333523660989453 24.256082834900177 30.561510300391515 25.848883203718852 30 20.412136717130398 25.33963902981318 30.46093255843748 23.78729169461894 31 20.44572988470381 26.360548506819008 29.33793213373107 23.855789474746107 32 20.238521577809543 27.02837664296314 27.853880817897792 24.879220961329523 33 20.55800975109783 25.34226191977387 28.905558811750144 25.194169517378157 34 19.23556880899611 24.334971294486987 30.77729343984957 25.652166456667334 35 18.560981687184057 24.420820500507933 28.870048916897765 28.148148895410248 36 18.928388042446432 24.667372156812505 29.8428384511633 26.561401349577768 37 18.452535275347962 25.48974903987095 32.05766726219719 24.000048422583887 38 19.729075643137662 25.679605920871445 30.914188119720805 23.67713031627009 39 20.331634171413928 24.48750243373924 32.637426823892106 22.54343657095472 40 20.571931243966095 23.679147923932156 32.0578690229634 23.69105180913835 41 18.33188233715636 24.47297565857236 30.18583175371467 27.009310250556606 42 19.071335545303867 24.625506797824613 29.218792401286027 27.084365255585496 43 19.498866608895835 24.362108117541787 30.603577420145612 25.53544785341677 44 19.92780999785125 24.38783261523314 29.3539721146445 26.330385272271112 45 20.622270555134662 23.574333205887783 28.346378848208314 27.457017390769245 46 20.62741545467293 23.953139044440835 29.24582834395772 26.173617156928515 47 18.23372572439681 24.18082606910508 31.34403943212415 26.24140877437396 48 18.511045897547902 23.469619368226514 31.37692643701584 26.64240829720975 49 20.481845061854806 22.062438904317982 32.660629312005874 24.795086721821335 50 20.356148104508044 21.611907113378454 31.558914648134266 26.473030133979236 51 18.201141360654432 21.583660606109518 30.138518854039198 30.07667917919685 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 61.0 1 256.5 2 452.0 3 2788.5 4 5125.0 5 3506.5 6 1888.0 7 1921.0 8 1954.0 9 2246.0 10 2538.0 11 2738.0 12 2938.0 13 3006.0 14 3074.0 15 3045.5 16 3017.0 17 2884.5 18 2752.0 19 2909.5 20 3067.0 21 3127.5 22 3188.0 23 3571.5 24 3955.0 25 4675.0 26 6232.0 27 7069.0 28 8329.5 29 9590.0 30 11808.0 31 14026.0 32 16181.5 33 18337.0 34 21627.0 35 24917.0 36 28340.0 37 31763.0 38 36422.5 39 41082.0 40 45551.0 41 50020.0 42 57496.5 43 64973.0 44 72111.5 45 79250.0 46 94141.0 47 109032.0 48 120812.0 49 132592.0 50 125543.5 51 118495.0 52 98846.0 53 79197.0 54 66031.5 55 52866.0 56 45078.0 57 37290.0 58 32803.0 59 28316.0 60 24934.0 61 21552.0 62 17190.0 63 12828.0 64 10556.0 65 8284.0 66 6508.5 67 4733.0 68 3666.0 69 2599.0 70 1954.5 71 1310.0 72 1055.5 73 801.0 74 631.5 75 402.0 76 342.0 77 219.0 78 96.0 79 64.0 80 32.0 81 20.0 82 8.0 83 5.0 84 2.0 85 3.0 86 4.0 87 2.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 991273.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.69607645712363 #Duplication Level Percentage of deduplicated Percentage of total 1 72.30624393619436 27.256616997462146 2 11.903335211098522 8.974180684246836 3 4.444640581323242 5.02636533533986 4 2.3362976958206643 3.5227702627303015 5 1.4138989122559242 2.664922074952163 6 0.9848686923302673 2.2275411315785476 7 0.7085523138778159 1.8696749538467006 8 0.5977607178583646 1.8026586978763217 9 0.5050223212872169 1.7133624032217287 >10 4.582362720565602 34.77250634698305 >50 0.1649228262021477 4.008440112809491 >100 0.046155886908134554 2.9825477661885023 >500 0.003778844540310395 0.9612161409157117 >1k 0.002159339737320226 2.2171970918486585 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGCT 3796 0.38294193426028955 No Hit TCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGC 3591 0.36226145572410423 No Hit CCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGC 3542 0.3573183169520404 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3283 0.3311902977282747 No Hit GCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGC 3189 0.32170754171656046 No Hit CGCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTG 1902 0.19187448866255816 No Hit TCCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTG 1478 0.14910120622674078 No Hit CGTTCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTC 1010 0.1018891869343763 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.40079776206958123 0.0 2 0.0 0.0 0.0 1.5298510097621947 0.0 3 0.0 0.0 0.0 2.3374993568875575 0.0 4 0.0 0.0 0.0 3.17621886200875 0.0 5 0.0 0.0 0.0 4.543652454974563 0.0 6 0.0 0.0 0.0 5.724558219582295 0.0 7 0.0 0.0 0.0 6.691698452394043 0.0 8 0.0 0.0 0.0 8.270173806812048 0.0 9 0.0 0.0 0.0 9.104151933927385 0.0 10 1.0088038310334287E-4 0.0 0.0 10.405912397492921 0.0 11 1.0088038310334287E-4 0.0 0.0 12.662404806748494 0.0 12 1.0088038310334287E-4 0.0 0.0 14.797134593598333 0.0 13 1.0088038310334287E-4 0.0 0.0 15.602664452678525 0.0 14 1.0088038310334287E-4 0.0 0.0 15.911459305357859 0.0 15 1.0088038310334287E-4 0.0 0.0 16.240430234657858 0.0 16 2.0176076620668574E-4 0.0 0.0 16.939733050330233 0.0 17 2.0176076620668574E-4 0.0 0.0 18.025306852905306 0.0 18 2.0176076620668574E-4 0.0 0.0 19.19511577537167 0.0 19 2.0176076620668574E-4 0.0 0.0 20.063494113125245 0.0 20 2.0176076620668574E-4 0.0 0.0 20.93943847961157 0.0 21 2.0176076620668574E-4 0.0 0.0 22.198324780358185 0.0 22 2.0176076620668574E-4 0.0 0.0 23.6140800768305 0.0 23 2.0176076620668574E-4 0.0 0.0 25.00854961246801 0.0 24 2.0176076620668574E-4 0.0 0.0 25.989106936232503 0.0 25 2.0176076620668574E-4 0.0 0.0 26.842857618436092 0.0 26 2.0176076620668574E-4 0.0 0.0 27.62922020472665 0.0 27 2.0176076620668574E-4 0.0 0.0 28.37502887700966 0.0 28 2.0176076620668574E-4 0.0 0.0 29.213344860598443 0.0 29 2.0176076620668574E-4 0.0 0.0 30.048735313077223 0.0 30 2.0176076620668574E-4 0.0 0.0 30.994690665437272 0.0 31 2.0176076620668574E-4 0.0 0.0 31.864884850086707 0.0 32 2.0176076620668574E-4 0.0 0.0 32.71117038394065 0.0 33 2.0176076620668574E-4 0.0 0.0 33.519524893747736 0.0 34 2.0176076620668574E-4 0.0 0.0 34.29418535559831 0.0 35 2.0176076620668574E-4 0.0 0.0 35.15055892776258 0.0 36 2.0176076620668574E-4 0.0 0.0 35.938434719799695 0.0 37 2.0176076620668574E-4 0.0 0.0 36.746688349223675 0.0 38 3.026411493100286E-4 0.0 0.0 37.531033327852164 0.0 39 3.026411493100286E-4 0.0 0.0 38.35552869895579 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGACGT 25 3.8904152E-5 45.000004 12 CCCGCGG 25 3.8904152E-5 45.000004 2 TCGTTAG 35 1.2117016E-7 45.0 1 GCAACGC 20 7.032816E-4 45.0 37 CCGGATA 20 7.032816E-4 45.0 20 GACGGCG 45 3.8380676E-10 45.0 9 CGATCGT 20 7.032816E-4 45.0 10 GTACGAA 20 7.032816E-4 45.0 9 CGCACGG 30 2.1651995E-6 44.999996 2 CGTTTTT 2240 0.0 43.292408 1 ATGGGCG 90 0.0 40.0 5 GTTTACG 45 1.927765E-8 40.0 1 TATTGCG 90 0.0 40.0 1 TACGGGT 40 3.4575714E-7 39.375 4 TTACACG 180 0.0 38.75 34 TTCGCAG 35 6.247423E-6 38.571426 1 AATCGTG 35 6.247423E-6 38.571426 10 GCGAGGC 35 6.247423E-6 38.571426 9 TTTGTCG 345 0.0 38.47826 1 TTTCGCG 305 0.0 38.360657 1 >>END_MODULE