##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933917.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 627134 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.43353573558442 33.0 31.0 34.0 31.0 34.0 2 32.64633395733607 34.0 31.0 34.0 31.0 34.0 3 32.71853862172996 34.0 31.0 34.0 31.0 34.0 4 36.08836707944395 37.0 35.0 37.0 35.0 37.0 5 36.11068128980409 37.0 35.0 37.0 35.0 37.0 6 35.64336170579175 37.0 35.0 37.0 35.0 37.0 7 36.00250823587941 37.0 35.0 37.0 35.0 37.0 8 35.990437450369456 37.0 35.0 37.0 35.0 37.0 9 37.848815404682256 39.0 38.0 39.0 35.0 39.0 10 37.59137441121036 39.0 37.0 39.0 35.0 39.0 11 37.538368195632835 39.0 37.0 39.0 35.0 39.0 12 37.35031109778772 39.0 37.0 39.0 35.0 39.0 13 37.27598886362404 39.0 37.0 39.0 34.0 39.0 14 38.522663418025495 40.0 38.0 41.0 34.0 41.0 15 38.58224079702265 40.0 38.0 41.0 35.0 41.0 16 38.68376136519468 40.0 38.0 41.0 35.0 41.0 17 38.622450704315185 40.0 38.0 41.0 35.0 41.0 18 38.58956140155055 40.0 38.0 41.0 35.0 41.0 19 38.606830438151974 40.0 38.0 41.0 35.0 41.0 20 38.5318321124353 40.0 38.0 41.0 34.0 41.0 21 38.4521489825141 40.0 38.0 41.0 34.0 41.0 22 38.44136819244372 40.0 38.0 41.0 34.0 41.0 23 38.36223837329821 40.0 37.0 41.0 34.0 41.0 24 38.33202473474569 40.0 37.0 41.0 34.0 41.0 25 38.25964945290799 40.0 37.0 41.0 34.0 41.0 26 38.1903293395032 40.0 37.0 41.0 34.0 41.0 27 38.165937423262015 40.0 37.0 41.0 34.0 41.0 28 38.10091463706321 40.0 37.0 41.0 34.0 41.0 29 38.08676136200557 40.0 37.0 41.0 34.0 41.0 30 38.036690723194724 40.0 37.0 41.0 34.0 41.0 31 37.98912672570774 40.0 37.0 41.0 34.0 41.0 32 37.874787525473025 40.0 36.0 41.0 34.0 41.0 33 37.81586869791783 40.0 36.0 41.0 33.0 41.0 34 37.77695516428706 40.0 36.0 41.0 33.0 41.0 35 37.742055126974456 40.0 36.0 41.0 33.0 41.0 36 37.665718969151726 40.0 36.0 41.0 33.0 41.0 37 37.5871615954485 40.0 36.0 41.0 33.0 41.0 38 37.56812100763154 40.0 36.0 41.0 33.0 41.0 39 37.48998938026004 40.0 36.0 41.0 33.0 41.0 40 37.39492038384141 40.0 35.0 41.0 33.0 41.0 41 37.25861618091189 40.0 35.0 41.0 33.0 41.0 42 37.25991255457367 40.0 35.0 41.0 33.0 41.0 43 37.15051647654249 39.0 35.0 41.0 32.0 41.0 44 37.08174967391339 39.0 35.0 41.0 32.0 41.0 45 37.09865515184953 39.0 35.0 41.0 32.0 41.0 46 37.034351510203564 39.0 35.0 41.0 32.0 41.0 47 36.92722767383047 39.0 35.0 41.0 32.0 41.0 48 36.885354645099774 39.0 35.0 41.0 32.0 41.0 49 36.8793096850115 39.0 35.0 41.0 32.0 41.0 50 36.79886595209317 39.0 35.0 41.0 32.0 41.0 51 35.89567779772744 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 7.0 10 12.0 11 17.0 12 11.0 13 13.0 14 10.0 15 13.0 16 30.0 17 41.0 18 82.0 19 177.0 20 335.0 21 601.0 22 843.0 23 1289.0 24 1683.0 25 2434.0 26 3250.0 27 4013.0 28 4632.0 29 5587.0 30 6796.0 31 8905.0 32 12227.0 33 17741.0 34 33906.0 35 47970.0 36 42197.0 37 66873.0 38 131846.0 39 233426.0 40 165.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.14954060854618 4.814122659591092 52.15711474740645 15.879221984456274 2 19.712214614420525 7.340217561159178 51.10438917360563 21.84317865081466 3 20.686328599629427 7.389010960974847 49.52689536845395 22.397765070941777 4 19.175806127558065 4.8216170706738914 50.92755296316258 25.075023838605464 5 20.12536395730418 6.217172087624016 47.698896886470834 25.958567068600967 6 21.900263739487894 9.051016210251717 50.76522720822025 18.28349284204014 7 82.51490112161038 2.8274659004295732 10.212171561420686 4.445461416539368 8 83.09420315275523 5.343993468700469 6.864083274069019 4.697720104475279 9 76.93858090934313 6.076532288155322 9.141108598800257 7.843778203701282 10 38.15006043365533 31.290601370679948 15.772227307082698 14.787110888582026 11 31.1824905044217 24.83217302841179 24.940602805779946 19.044733661386562 12 28.993165734914705 21.84844068412811 28.258394537690513 20.89999904326667 13 25.3687409708292 23.652520832868255 30.14395647501172 20.834781721290824 14 20.700998510685118 27.038559542298774 29.179250367545055 23.081191579471056 15 18.014491320834143 25.30113181552906 34.54827835837317 22.136098505263625 16 20.853119110110438 24.18526184196679 32.1436885896794 22.817930458243374 17 20.427053867275575 24.059610864663693 30.050515519809164 25.46281974825157 18 20.855351487879783 24.65948266239751 30.43831142945527 24.046854420267437 19 23.029846890776135 26.513631855392944 27.856247628098618 22.6002736257323 20 26.831586231969563 25.83387282462759 28.919337812971392 18.415203130431454 21 25.46234138158671 27.01719249793505 27.11286583090695 20.40760028957129 22 23.07848083503685 24.07858607570312 28.116638549337143 24.72629453992289 23 22.540637248179817 26.919446242748755 27.758341917357377 22.78157459171405 24 22.630251270063496 23.382243667222635 29.586659310450397 24.40084575226347 25 21.707163062439605 26.952612998179013 26.778009165505303 24.56221477387608 26 21.344401674921148 27.353165352221374 27.336103607841387 23.96632936501609 27 21.612127551687518 27.10090666428546 27.946021105537255 23.340944678489763 28 18.664910529488115 27.112706375351998 30.48885884037542 23.733524254784463 29 20.389900722971486 24.755315450924364 29.098725312293706 25.756058513810448 30 21.270414297422878 25.600110981066248 29.233943622893992 23.895531098616882 31 22.387241004314866 27.058810397777826 25.290448293347197 25.26350030456011 32 22.756380614031453 28.87771991312861 24.649755873545367 23.71614359929457 33 22.36316321551694 26.785663032143052 25.191585849276233 25.65958790306378 34 21.527775563117295 26.578530266258888 26.592721810649717 25.300972359974104 35 21.052757464911807 25.573162992279165 26.44442814454327 26.929651398265765 36 20.68106656631597 27.307720519059725 25.834510646847402 26.176702267776903 37 20.762707810451992 28.023835416354398 28.281834504268627 22.931622268924983 38 20.837333010170074 27.897227705721583 24.97265337232553 26.292785911782808 39 20.98801850960082 28.010600605293284 26.140665312357488 24.860715572748408 40 22.207375138327695 25.172929549346712 28.171491260241034 24.448204052084563 41 19.724333236596962 27.491253862810815 27.456811462940934 25.327601437651282 42 21.973613294766352 25.84184560237525 26.72459155459599 25.45994954826241 43 21.370392930378515 26.460214244483637 26.7228375434915 25.44655528164635 44 20.79635293254711 25.707105658439822 27.01304665350627 26.483494755506797 45 20.567055844524457 24.20152630857201 26.03032206832989 29.201095778573638 46 21.76424815111284 25.828610791314137 26.888511865087843 25.518629192485175 47 19.183619449750772 25.632002092056883 30.18685001929412 24.997528438898225 48 19.99748060223174 24.55216907391403 28.869587679826004 26.580762644028226 49 20.28386277892763 24.169954108691286 29.800489209642596 25.74569390273849 50 20.431199711704355 24.423647896621777 27.693443506491434 27.451708885182434 51 19.819687658458957 24.44357984099092 25.975309901871054 29.761422598679072 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 112.0 1 350.0 2 588.0 3 1104.5 4 1621.0 5 1206.5 6 792.0 7 765.5 8 739.0 9 833.5 10 928.0 11 938.0 12 948.0 13 916.5 14 885.0 15 845.5 16 806.0 17 910.5 18 1015.0 19 1093.5 20 1172.0 21 1418.0 22 1664.0 23 1925.5 24 2187.0 25 2636.0 26 4098.5 27 5112.0 28 6237.0 29 7362.0 30 8624.0 31 9886.0 32 11304.0 33 12722.0 34 14474.5 35 16227.0 36 17889.5 37 19552.0 38 21587.5 39 23623.0 40 27252.0 41 30881.0 42 33178.5 43 35476.0 44 38955.5 45 42435.0 46 52233.0 47 62031.0 48 63274.0 49 64517.0 50 63785.0 51 63053.0 52 54456.5 53 45860.0 54 40861.0 55 35862.0 56 33749.5 57 31637.0 58 29917.5 59 28198.0 60 26973.0 61 25748.0 62 22187.0 63 18626.0 64 15361.5 65 12097.0 66 9929.5 67 7762.0 68 6065.5 69 4369.0 70 3579.0 71 2789.0 72 2454.0 73 2119.0 74 1584.0 75 932.5 76 816.0 77 634.5 78 453.0 79 287.0 80 121.0 81 85.0 82 49.0 83 57.5 84 66.0 85 47.5 86 29.0 87 25.5 88 22.0 89 27.5 90 33.0 91 21.0 92 9.0 93 4.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 627134.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.583202697402022 #Duplication Level Percentage of deduplicated Percentage of total 1 70.47615648415088 19.43958109636157 2 11.78284862559424 6.500174039851414 3 4.532617959401525 3.7507235977217093 4 2.257000042657219 2.490211586586364 5 1.458093830012076 2.010944883252717 6 0.9140460298845762 1.5127390150237112 7 0.6724826368560433 1.2984457418018545 8 0.5051358727115046 1.1146612133384397 9 0.39977374598207194 0.9924336241670878 >10 6.296741675094057 44.6818844033746 >50 0.6448328743707246 10.623351374292483 >100 0.05266330189960537 2.475107390339796 >500 0.0035108867933070255 0.618494393203919 >1k 0.0040960345921915295 2.491247640684366 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGC 3354 0.5348139313129252 No Hit GAATCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTC 2934 0.4678425982325946 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCG 2326 0.3708936208210686 No Hit GCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 1967 0.31364907659288127 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 1753 0.2795255878329033 Illumina Single End Adapter 2 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGCT 1738 0.27713375450860583 Illumina Single End Adapter 2 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 1363 0.21733792140116787 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 793 0.12644825507786214 No Hit GAACTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCT 784 0.12501315508328364 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.1891110990633583E-4 0.0 0.0 0.28925237668504655 0.0 2 3.1891110990633583E-4 0.0 0.0 1.158444606734765 0.0 3 3.1891110990633583E-4 0.0 0.0 1.6227791827583897 0.0 4 3.1891110990633583E-4 0.0 0.0 2.3063651468426207 0.0 5 3.1891110990633583E-4 0.0 0.0 3.6338326418277433 0.0 6 3.1891110990633583E-4 0.0 0.0 4.232747706231842 0.0 7 3.1891110990633583E-4 0.0 0.0 4.840432826158365 0.0 8 3.1891110990633583E-4 0.0 0.0 5.824433055774364 0.0 9 3.1891110990633583E-4 0.0 0.0 6.270589698533327 0.0 10 3.1891110990633583E-4 0.0 0.0 7.5337966048723235 0.0 11 3.1891110990633583E-4 0.0 0.0 9.152270487646978 0.0 12 3.1891110990633583E-4 0.0 0.0 11.344624912698084 0.0 13 3.1891110990633583E-4 0.0 0.0 11.862696010740926 0.0 14 3.1891110990633583E-4 0.0 0.0 12.037299843414646 0.0 15 3.1891110990633583E-4 0.0 0.0 12.397509942053851 0.0 16 3.1891110990633583E-4 0.0 0.0 13.025286461904473 0.0 17 3.1891110990633583E-4 0.0 0.0 13.819215670016296 0.0 18 3.1891110990633583E-4 0.0 0.0 14.678362200103965 0.0 19 3.1891110990633583E-4 0.0 0.0 15.400058041822003 0.0 20 3.1891110990633583E-4 0.0 0.0 16.106286694709585 0.0 21 3.1891110990633583E-4 0.0 0.0 17.07657374659961 0.0 22 3.1891110990633583E-4 0.0 0.0 18.09884330940437 0.0 23 3.1891110990633583E-4 0.0 0.0 19.06275213909627 0.0 24 3.1891110990633583E-4 0.0 0.0 19.774083369742353 0.0 25 3.1891110990633583E-4 0.0 0.0 20.413659600659507 0.0 26 3.1891110990633583E-4 0.0 0.0 20.956605765275047 0.0 27 3.1891110990633583E-4 0.0 0.0 21.478982163301623 0.0 28 3.1891110990633583E-4 0.0 0.0 22.039468438962007 0.0 29 3.1891110990633583E-4 0.0 0.0 22.612232792353787 0.0 30 3.1891110990633583E-4 0.0 0.0 23.27875701205803 0.0 31 3.1891110990633583E-4 0.0 0.0 23.89999585415557 0.0 32 3.1891110990633583E-4 0.0 0.0 24.51804558515405 0.0 33 3.1891110990633583E-4 0.0 0.0 25.084591171902655 0.0 34 3.1891110990633583E-4 0.0 0.0 25.667401225256484 0.0 35 3.1891110990633583E-4 0.0 0.0 26.250370734165266 0.0 36 3.1891110990633583E-4 0.0 0.0 26.854866742992726 0.0 37 3.1891110990633583E-4 0.0 0.0 27.412004451999096 0.0 38 3.1891110990633583E-4 0.0 0.0 27.97153399432976 0.0 39 3.1891110990633583E-4 0.0 0.0 28.5648681143105 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTTAT 30 2.163917E-6 45.000004 28 TTTAGCG 25 3.8887716E-5 45.0 1 CGAACTA 20 7.030833E-4 45.0 18 CGTATCG 20 7.030833E-4 45.0 33 CTATCGA 25 3.8887716E-5 45.0 34 TTGTCGT 20 7.030833E-4 45.0 29 TACGGTG 20 7.030833E-4 45.0 1 CGTTCGG 25 3.8887716E-5 45.0 2 CCCCGAT 25 3.8887716E-5 45.0 40 CGTAATA 20 7.030833E-4 45.0 31 CCAACGT 20 7.030833E-4 45.0 19 CGGTAGA 25 3.8887716E-5 45.0 24 CCTATCG 25 3.8887716E-5 45.0 33 TCGACAT 25 3.8887716E-5 45.0 37 TATCGGT 20 7.030833E-4 45.0 35 TGTAACG 20 7.030833E-4 45.0 13 CGATATA 25 3.8887716E-5 45.0 20 AGTACGA 20 7.030833E-4 45.0 13 GTAACGA 20 7.030833E-4 45.0 14 CGCCAAT 20 7.030833E-4 45.0 16 >>END_MODULE