SRR2933915.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933915.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1870008
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTC	28569	1.5277474748771127	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGC	20605	1.101866943884732	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCG	17971	0.9610119314997582	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11193	0.5985535890755548	No Hit
GCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	7134	0.3814956941360679	No Hit
GAACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCT	6813	0.36432999217115647	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTC	4956	0.2650256041685383	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCT	4700	0.2513358231622539	No Hit
CTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGCT	4196	0.22438406680613132	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGCGAAAAT	4051	0.2166300892830405	No Hit
CCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	3760	0.20106865852980307	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTA	3663	0.19588151494539058	No Hit
GAATGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTT	3034	0.16224529520729322	No Hit
CGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTG	2528	0.1351865874370591	No Hit
TCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	2489	0.13310103486188293	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	1873	0.10015999931551095	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAACGCC	20	7.0344214E-4	45.000004	12
TCGCGAC	25	3.891748E-5	45.0	33
CGTTTTT	5460	0.0	42.445053	1
TACGGCT	2360	0.0	41.28178	7
CCGATGA	1485	0.0	40.151516	18
CGATGAA	1510	0.0	39.784767	19
TGATACC	2285	0.0	39.682713	4
CTTACGG	165	0.0	39.545452	2
TGGGCGA	1930	0.0	39.520725	6
ACGGCTG	2500	0.0	38.88	8
CGGTAGG	220	0.0	38.863636	31
GATACCT	2335	0.0	38.640255	5
CTACGGC	265	0.0	38.207546	6
TCTTGCG	675	0.0	38.0	1
ACCACCG	2315	0.0	37.90497	14
TTGGGAC	2985	0.0	37.839195	5
TTTCGCG	565	0.0	37.83186	1
TTTGGGA	8375	0.0	37.773136	4
CCAATCG	60	1.5643309E-10	37.500004	40
CAATCGA	90	0.0	37.5	41