##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933910.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1436444 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.423042596857236 33.0 31.0 34.0 31.0 34.0 2 32.64077889566179 34.0 31.0 34.0 31.0 34.0 3 32.70496865871555 34.0 31.0 34.0 31.0 34.0 4 36.08341501652692 37.0 35.0 37.0 35.0 37.0 5 36.09323579617444 37.0 35.0 37.0 35.0 37.0 6 35.67570542255737 37.0 35.0 37.0 35.0 37.0 7 36.03529897441181 37.0 35.0 37.0 35.0 37.0 8 36.03552244292155 37.0 36.0 37.0 35.0 37.0 9 37.91223117643291 39.0 38.0 39.0 35.0 39.0 10 37.60013616959659 39.0 37.0 39.0 35.0 39.0 11 37.48833577918805 39.0 37.0 39.0 35.0 39.0 12 37.115938386738364 39.0 35.0 39.0 34.0 39.0 13 36.919407230633425 39.0 35.0 39.0 33.0 39.0 14 37.64055403482489 40.0 37.0 41.0 32.0 41.0 15 37.841334573432725 40.0 37.0 41.0 33.0 41.0 16 38.09934254311341 40.0 37.0 41.0 33.0 41.0 17 38.1480844362885 40.0 36.0 41.0 33.0 41.0 18 38.13259410043134 40.0 36.0 41.0 34.0 41.0 19 38.14540699115315 40.0 36.0 41.0 34.0 41.0 20 38.03037361707104 40.0 36.0 41.0 33.0 41.0 21 37.990521732834694 40.0 36.0 41.0 33.0 41.0 22 38.06253010907491 40.0 36.0 41.0 34.0 41.0 23 38.04704116554492 40.0 36.0 41.0 34.0 41.0 24 37.998849241599395 40.0 36.0 41.0 34.0 41.0 25 37.90129026958238 40.0 35.0 41.0 34.0 41.0 26 37.84749701345824 40.0 35.0 41.0 34.0 41.0 27 37.821852435597904 40.0 35.0 41.0 34.0 41.0 28 37.71294321254431 40.0 35.0 41.0 34.0 41.0 29 37.66914408079953 40.0 35.0 41.0 33.0 41.0 30 37.59521777389164 40.0 35.0 41.0 33.0 41.0 31 37.44710827571419 40.0 35.0 41.0 33.0 41.0 32 37.39573488420015 39.0 35.0 41.0 33.0 41.0 33 37.33568242131263 39.0 35.0 41.0 33.0 41.0 34 37.22397949380554 39.0 35.0 41.0 32.0 41.0 35 37.19284288144891 39.0 35.0 41.0 32.0 41.0 36 37.08201781621838 39.0 35.0 41.0 32.0 41.0 37 36.945174333284136 39.0 35.0 41.0 31.0 41.0 38 36.85680193589169 39.0 35.0 41.0 31.0 41.0 39 36.86115991991334 39.0 35.0 41.0 31.0 41.0 40 36.78521821943633 39.0 35.0 41.0 31.0 41.0 41 36.639873883005535 39.0 35.0 41.0 31.0 41.0 42 36.63713447931141 39.0 35.0 41.0 31.0 41.0 43 36.54338839523156 39.0 35.0 41.0 31.0 41.0 44 36.46301770204756 38.0 35.0 41.0 31.0 41.0 45 36.50056946180986 38.0 35.0 41.0 31.0 41.0 46 36.44219823397223 38.0 35.0 40.0 31.0 41.0 47 36.308037765481984 38.0 35.0 40.0 31.0 41.0 48 36.21634675629541 38.0 35.0 40.0 31.0 41.0 49 36.21148753449491 38.0 35.0 40.0 31.0 41.0 50 36.134481399901425 38.0 35.0 40.0 31.0 41.0 51 35.10066316542796 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 26.0 10 35.0 11 24.0 12 38.0 13 15.0 14 26.0 15 54.0 16 93.0 17 169.0 18 297.0 19 501.0 20 855.0 21 1507.0 22 2282.0 23 3370.0 24 4552.0 25 6448.0 26 8536.0 27 10466.0 28 12759.0 29 15524.0 30 19816.0 31 26201.0 32 36649.0 33 57807.0 34 120466.0 35 108153.0 36 99471.0 37 160586.0 38 292973.0 39 446418.0 40 323.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.624350131296453 4.437346669971124 55.37549671271557 15.562806486016859 2 20.070674526817616 5.9604829704464635 52.3100796132672 21.658762889468715 3 21.2129397317264 6.1330619223582685 50.64708404922155 22.00691429669378 4 19.997507734377393 4.800674443277984 50.62334487108443 24.578472951260196 5 20.485031090665558 5.566454383185143 48.57021923583516 25.378295290314135 6 22.29255021427915 7.654179348446581 51.911874044515486 18.141396392758786 7 82.46356975976788 2.4745830676308995 10.219681379851913 4.842165792749317 8 83.5293962034023 4.077430098214758 7.550311742051901 4.842861956331051 9 78.49968394173389 4.98049349643982 9.718930915510802 6.800891646315485 10 44.66703888212837 24.13606099506838 16.84583596715222 14.351064155651038 11 34.26468417842951 22.201700866862893 24.674473909181284 18.859141045526314 12 31.53168518925903 19.002202661572607 28.685211536265946 20.780900612902418 13 29.44089710423797 19.3845357006608 31.845585348262794 19.328981846838442 14 21.74668834984169 21.34973587553709 35.00352258772357 21.900053186897644 15 19.50288350955554 21.851460968892628 37.38690822614735 21.258747295404483 16 26.497378247951193 22.26449482193528 28.68904043596548 22.54908649414805 17 27.123159691571686 22.749511989329203 27.1644421919685 22.96288612713061 18 27.124203936944287 21.597500494276144 30.217815661452867 21.060479907326705 19 26.26381536627951 24.718958762054072 27.40621980390464 21.611006067761778 20 23.733191130319035 29.294354670283006 28.573129199606807 18.39932499979115 21 24.564619295983693 25.443316968848073 31.571157664343335 18.4209060708249 22 22.775061192778836 21.73694205969742 33.21605297526391 22.27194377225983 23 22.186106802632054 23.263071863574215 31.982451108431654 22.568370225362074 24 23.02449660411405 25.7178142691257 28.00123081721251 23.256458309547746 25 24.391970727713716 25.294546811431562 25.772880808440846 24.540601652413876 26 22.07019556627338 24.061153793673824 26.65095193408166 27.217698705971134 27 21.744251777305625 23.18941775662678 31.32353227832063 23.742798187746963 28 19.37757406484346 24.001840656510105 29.647657688012895 26.97292759063354 29 22.728139767369978 26.232557621459662 27.244222538435192 23.79508007273517 30 27.08668071988884 23.382951232348773 28.346388721036114 21.183979326726277 31 24.824357928328567 23.427575317937908 29.838824207556996 21.90924254617653 32 28.01571101971257 24.73636285159742 25.650007936264828 21.597918192425183 33 28.253033184725613 23.238497289139012 26.223089796748077 22.28537972938729 34 22.676832511396196 22.848645683368098 30.673245876623106 23.801275928612604 35 23.449156388971655 26.282820632060837 27.128937849300076 23.13908512966743 36 27.68071710418227 25.368340151095342 25.693935858272233 21.25700688645015 37 23.14305326208331 27.540022444313877 27.93419026429154 21.38273402931127 38 23.57140271392411 26.19440785718065 27.841182809771908 22.393006619123334 39 23.2960700173484 24.7939355798068 26.56546304624475 25.344531356600047 40 25.800309653561154 21.69120411237751 28.36887480472611 24.13961142933522 41 21.902350526717367 22.690198852165487 27.50222076182573 27.90522985929142 42 20.83269518338341 23.142426714859752 31.44877210667454 24.5761059950823 43 21.6025824884228 23.487097304176146 30.36825661146554 24.542063595935517 44 23.25367365522081 21.983801665780216 28.25999482054295 26.50252985845602 45 22.81864103299537 21.440376373878827 26.218843198899506 29.5221393942263 46 23.690655535475102 21.85668219575563 29.231282249777923 25.22138001899134 47 19.741110687224843 23.29126648863443 33.06220082370075 23.905422000439973 48 20.604910459440116 26.041669567348258 29.81257884052563 23.540841132685994 49 23.8410268691296 22.407974136130612 30.881816485710544 22.869182509029244 50 22.15735524670645 22.8452344818176 27.82148138040884 27.17592889106711 51 20.786678770630807 23.31925226462013 26.38181509338338 29.51225387136568 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 165.0 1 782.5 2 1400.0 3 2808.5 4 4217.0 5 2976.5 6 1736.0 7 1766.0 8 1796.0 9 1904.0 10 2012.0 11 2080.0 12 2148.0 13 2079.0 14 2010.0 15 2007.0 16 2004.0 17 1987.0 18 1970.0 19 1999.0 20 2028.0 21 2753.0 22 3478.0 23 4007.5 24 4537.0 25 5712.5 26 8378.0 27 9868.0 28 11807.0 29 13746.0 30 16302.5 31 18859.0 32 22410.5 33 25962.0 34 28526.5 35 31091.0 36 34036.0 37 36981.0 38 41146.5 39 45312.0 40 48935.5 41 52559.0 42 59166.5 43 65774.0 44 74072.5 45 82371.0 46 106226.0 47 130081.0 48 144807.0 49 159533.0 50 158297.5 51 157062.0 52 138742.0 53 120422.0 54 111577.0 55 102732.0 56 95458.5 57 88185.0 58 81549.0 59 74913.0 60 64724.5 61 54536.0 62 48719.0 63 42902.0 64 36594.0 65 30286.0 66 25229.0 67 20172.0 68 17144.0 69 14116.0 70 12202.0 71 10288.0 72 8055.5 73 5823.0 74 4844.5 75 2654.5 76 1443.0 77 1003.5 78 564.0 79 439.5 80 315.0 81 236.5 82 158.0 83 120.5 84 83.0 85 60.0 86 37.0 87 22.0 88 7.0 89 7.0 90 7.0 91 3.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1436444.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.14416936002665 #Duplication Level Percentage of deduplicated Percentage of total 1 69.20409146476602 18.78487579126384 2 12.328184862109229 6.692766755976194 3 4.860701095255255 3.9581908121422704 4 2.532917827193898 2.7501580190552755 5 1.4412536293653735 1.956081630312339 6 0.9978031370867942 1.62507224046299 7 0.6993403975634422 1.3288109934239312 8 0.5508749216271854 1.1962433735071782 9 0.46732468356532547 1.141662632113625 >10 6.311488478088563 43.51483085204876 >50 0.5154888284424058 8.48603511724785 >100 0.08119226727779753 4.028272431706061 >500 0.004669203829428273 0.9335227344161775 >1k 0.0041504034039362425 2.8294371368064324 >5k 5.188004254920303E-4 0.7740394795170493 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGC 5723 0.3984144178262431 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGCT 5270 0.3668782075737028 TruSeq Adapter, Index 16 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGC 4947 0.3443921238837017 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTC 4759 0.3313042485471066 No Hit GCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGC 4488 0.31243821548212114 TruSeq Adapter, Index 13 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGC 4182 0.2911356098810674 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCG 3914 0.27247842589060206 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2968 0.20662135105858634 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 2546 0.17724324790942075 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2272 0.15816836576991516 No Hit CGCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTG 1705 0.11869589068560975 No Hit TCCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTG 1662 0.11570238728415448 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.961635817337814E-5 0.0 0.0 0.38337728446079344 0.0 2 6.961635817337814E-5 0.0 0.0 1.4613169744173806 0.0 3 6.961635817337814E-5 0.0 0.0 2.091345015886453 0.0 4 6.961635817337814E-5 0.0 0.0 2.830322657896862 0.0 5 6.961635817337814E-5 0.0 0.0 4.261217283792476 0.0 6 6.961635817337814E-5 0.0 0.0 5.010219681379852 0.0 7 6.961635817337814E-5 0.0 0.0 5.773214966960077 0.0 8 6.961635817337814E-5 0.0 0.0 6.919866002433788 0.0 9 6.961635817337814E-5 0.0 0.0 7.449646488133196 0.0 10 6.961635817337814E-5 0.0 0.0 8.693064261467903 0.0 11 6.961635817337814E-5 0.0 0.0 10.647543517185493 0.0 12 6.961635817337814E-5 0.0 0.0 12.702131095956403 0.0 13 6.961635817337814E-5 0.0 0.0 13.279181088855536 0.0 14 6.961635817337814E-5 0.0 0.0 13.52966074556335 0.0 15 6.961635817337814E-5 0.0 0.0 13.882337216069683 0.0 16 1.3923271634675628E-4 0.0 0.0 14.5394460208682 0.0 17 1.3923271634675628E-4 0.0 0.0 15.402480013143569 0.0 18 1.3923271634675628E-4 0.0 0.0 16.285215434782003 0.0 19 1.3923271634675628E-4 0.0 0.0 17.03916059379969 0.0 20 1.3923271634675628E-4 0.0 0.0 17.834736335005054 0.0 21 1.3923271634675628E-4 0.0 0.0 18.918314949973684 0.0 22 1.3923271634675628E-4 0.0 0.0 20.067263325267117 0.0 23 1.3923271634675628E-4 0.0 0.0 21.103781282110546 0.0 24 2.0884907452013444E-4 0.0 0.0 21.867333498556157 0.0 25 2.0884907452013444E-4 0.0 0.0 22.561130124112044 0.0 26 2.0884907452013444E-4 0.0 0.0 23.183569982540217 0.0 27 2.0884907452013444E-4 0.0 0.0 23.92073759923812 0.0 28 2.0884907452013444E-4 0.0 0.0 24.566498937654373 0.0 29 2.0884907452013444E-4 0.0 0.0 25.348986803523143 0.0 30 2.0884907452013444E-4 0.0 0.0 26.288877255221923 0.0 31 2.0884907452013444E-4 0.0 0.0 26.966522885681584 0.0 32 2.0884907452013444E-4 0.0 0.0 27.618201614542578 0.0 33 2.0884907452013444E-4 0.0 0.0 28.26674760728577 0.0 34 2.0884907452013444E-4 0.0 0.0 28.983865712829736 0.0 35 2.0884907452013444E-4 0.0 0.0 29.767537056787457 0.0 36 2.0884907452013444E-4 0.0 0.0 30.442049951129317 0.0 37 2.0884907452013444E-4 0.0 0.0 31.152345653572294 0.0 38 2.0884907452013444E-4 0.0 0.0 32.08736296019894 0.0 39 2.0884907452013444E-4 0.0 0.0 33.99234498525526 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACGGC 20 7.0338754E-4 45.0 13 ACGGGAC 55 1.8189894E-12 45.0 5 GCCGAAT 20 7.0338754E-4 45.0 17 CGAATTG 25 3.891294E-5 45.0 31 CTATGCG 45 1.9288564E-8 40.0 1 TACGAAT 130 0.0 39.80769 12 TTGTTCG 375 0.0 39.600002 1 TTGGGAC 2085 0.0 39.496403 5 CGTTTTT 1400 0.0 39.375 1 TTTCGCG 540 0.0 38.75 1 CTATCCG 35 6.249378E-6 38.57143 1 TAAGACG 35 6.249378E-6 38.57143 14 TTTGGGA 6005 0.0 38.55537 4 CGAATAT 135 0.0 38.333332 14 GTTTGCG 215 0.0 37.67442 1 CGAACGA 90 0.0 37.5 22 TCCGATA 90 0.0 37.5 14 ATAATCG 30 1.1400641E-4 37.499996 26 CTGCGTA 30 1.1400641E-4 37.499996 1 CGGTCTA 30 1.1400641E-4 37.499996 31 >>END_MODULE