SRR2933905.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933905.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	707261
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGC	10371	1.4663610746245022	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTC	8605	1.2166654177170804	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCG	8346	1.180045273244248	No Hit
GCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC	4784	0.6764122438534007	No Hit
CCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC	3359	0.4749307539932217	No Hit
CTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGCT	3176	0.44905628897959876	No Hit
TCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC	2665	0.3768057336683346	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCT	2043	0.2888608307258565	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCCTGACTT	2021	0.2857502393034537	No Hit
GAACTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCT	1947	0.27528734088264445	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTC	1908	0.2697731106338396	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCCTGACTTCGTA	1755	0.24814036119622038	No Hit
TCCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTG	1100	0.15552957112013813	No Hit
GCCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTG	968	0.13686602258572153	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	961	0.13587628895132065	No Hit
CGCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTG	838	0.1184852550897052	No Hit
TGCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTG	733	0.10363925057369204	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTGTG	20	7.0314447E-4	45.0	18
TATTGCG	40	6.8084773E-9	45.0	1
AACGGTC	20	7.0314447E-4	45.0	13
ATCCGGT	20	7.0314447E-4	45.0	29
AACGCGC	20	7.0314447E-4	45.0	32
GATGCGA	20	7.0314447E-4	45.0	16
CAATCGG	25	3.8892787E-5	45.0	20
TGCGATA	30	2.1643136E-6	44.999996	11
ACGCGCA	30	2.1643136E-6	44.999996	15
TTCTTCG	135	0.0	41.666668	1
CGACCAA	265	0.0	41.603775	29
TGTTTCG	115	0.0	41.08696	1
CGGGATA	115	0.0	41.08696	6
ACACGAC	275	0.0	40.909092	26
TACGGCT	1435	0.0	40.296165	7
CACGACC	280	0.0	40.17857	27
CTACGGC	140	0.0	40.17857	6
ACGACCA	275	0.0	40.090908	28
TTATCCG	45	1.9264917E-8	40.0	1
ACGTGAG	225	0.0	40.0	44