##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933905.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 707261 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.323025021880184 33.0 31.0 34.0 31.0 34.0 2 32.525076315532736 34.0 31.0 34.0 31.0 34.0 3 32.61339166163552 34.0 31.0 34.0 31.0 34.0 4 36.02627460018296 37.0 35.0 37.0 35.0 37.0 5 36.038741002260835 37.0 35.0 37.0 35.0 37.0 6 35.49171380862228 37.0 35.0 37.0 33.0 37.0 7 35.924573813627504 37.0 35.0 37.0 35.0 37.0 8 35.863577943644565 37.0 35.0 37.0 35.0 37.0 9 37.77119903401997 39.0 38.0 39.0 35.0 39.0 10 37.49151868970578 39.0 37.0 39.0 35.0 39.0 11 37.47539734270658 39.0 37.0 39.0 35.0 39.0 12 37.218823037040075 39.0 37.0 39.0 34.0 39.0 13 37.064079597206685 39.0 37.0 39.0 33.0 39.0 14 38.12133568795678 40.0 37.0 41.0 33.0 41.0 15 38.187712881100474 40.0 37.0 41.0 33.0 41.0 16 38.38489185746139 40.0 37.0 41.0 34.0 41.0 17 38.31153704219517 40.0 37.0 41.0 34.0 41.0 18 38.30177119903402 40.0 37.0 41.0 34.0 41.0 19 38.321988629374445 40.0 37.0 41.0 34.0 41.0 20 38.219183582864034 40.0 37.0 41.0 34.0 41.0 21 38.184537250039234 40.0 37.0 41.0 34.0 41.0 22 38.22277631595691 40.0 37.0 41.0 34.0 41.0 23 38.15224365545393 40.0 37.0 41.0 34.0 41.0 24 38.098236718835054 40.0 37.0 41.0 34.0 41.0 25 38.0254729159391 40.0 36.0 41.0 34.0 41.0 26 37.98870572532629 40.0 36.0 41.0 34.0 41.0 27 37.96439221164464 40.0 36.0 41.0 34.0 41.0 28 37.90754615340023 40.0 36.0 41.0 34.0 41.0 29 37.92616021525293 40.0 36.0 41.0 34.0 41.0 30 37.86830604260662 40.0 36.0 41.0 34.0 41.0 31 37.8006252288759 40.0 36.0 41.0 33.0 41.0 32 37.65764972195554 40.0 36.0 41.0 33.0 41.0 33 37.59466024565189 40.0 36.0 41.0 33.0 41.0 34 37.50768669557632 40.0 36.0 41.0 33.0 41.0 35 37.529342067497005 40.0 36.0 41.0 33.0 41.0 36 37.44866039552584 40.0 36.0 41.0 33.0 41.0 37 37.38585189908676 40.0 35.0 41.0 33.0 41.0 38 37.34827312689375 40.0 35.0 41.0 33.0 41.0 39 37.266447605622254 39.0 35.0 41.0 33.0 41.0 40 37.13534041888355 39.0 35.0 41.0 32.0 41.0 41 36.927376173718045 39.0 35.0 41.0 31.0 41.0 42 37.04167061381866 39.0 35.0 41.0 32.0 41.0 43 36.95469282202751 39.0 35.0 41.0 32.0 41.0 44 36.88561082825152 39.0 35.0 41.0 32.0 41.0 45 36.90386858599584 39.0 35.0 41.0 32.0 41.0 46 36.808185379937534 39.0 35.0 41.0 32.0 41.0 47 36.67872963446309 39.0 35.0 41.0 31.0 41.0 48 36.64970216087131 39.0 35.0 41.0 31.0 41.0 49 36.70386038534572 39.0 35.0 41.0 32.0 41.0 50 36.60662895310218 39.0 35.0 40.0 31.0 41.0 51 35.67608704565924 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 7.0 10 15.0 11 11.0 12 13.0 13 9.0 14 8.0 15 9.0 16 28.0 17 60.0 18 90.0 19 184.0 20 396.0 21 760.0 22 1179.0 23 1707.0 24 2302.0 25 2889.0 26 3859.0 27 4531.0 28 5375.0 29 6780.0 30 8771.0 31 11565.0 32 16153.0 33 23259.0 34 45516.0 35 54697.0 36 50275.0 37 79579.0 38 151469.0 39 235617.0 40 144.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.5278235333208 4.3928620410287005 49.27728236110856 14.802032064541946 2 18.88199688658077 11.055183305738616 47.72382472665678 22.33899508102384 3 20.387098963466105 11.524175657925435 46.786546974879144 21.302178403729314 4 18.85117375339514 4.7237158559569945 52.43665351263537 23.988456878012503 5 23.13898263865815 5.864030393306007 46.234134216364254 24.76285275167159 6 21.06874265652991 11.203926131937148 49.2146463611029 18.512684850430038 7 77.9273846571492 2.510247277879029 14.496204371512073 5.066163693459699 8 77.51480712212323 7.598185111295547 8.742741364220564 6.144266402360656 9 71.89538232703345 5.442403865051233 10.891453084504873 11.770760723410453 10 38.81664618860647 26.343315975290594 19.17722029067063 15.66281754543231 11 32.694578097760235 22.57752088691445 24.344336814839217 20.383564200486102 12 26.864764210100656 20.560443740005457 29.53817614713663 23.03661590275726 13 24.87285457560929 23.237531830540632 33.11761853120701 18.771995062643068 14 20.21389557744595 27.490417257561212 30.711717456497674 21.583969708495164 15 16.319717897636092 23.36732832716635 38.08848501472582 22.224468760471737 16 20.347085446532468 25.020324887135022 28.944618747534502 25.68797091879801 17 20.892570069606553 24.56137126181141 29.85404256702971 24.692016101552326 18 22.4088419975087 22.7459169952818 31.153138657440465 23.69210234976904 19 21.574496543708758 25.12269162303591 29.023797438286575 24.27901439496876 20 24.261057799030343 26.37272520328422 30.298291578356505 19.067925419328933 21 22.68243265216094 29.197566386383528 29.23461070241396 18.88539025904157 22 21.34134357754775 23.006923893725233 30.635225185610405 25.01650734311662 23 20.881824390147344 27.684546440422984 28.68163238182227 22.751996787607403 24 22.22545849410614 23.825574999893956 28.696902557895882 25.252063948104027 25 19.950909211733716 29.65044021938153 25.781430051989297 24.61722051689546 26 19.519526737654132 24.962778945820567 29.280704011673205 26.2369903048521 27 21.021518223117067 26.075380941406358 27.935231830964806 24.967869004511773 28 15.6540513332419 25.129619758476718 31.958499054804378 27.257829853477006 29 19.420836155252445 23.05287581246527 31.379504878679864 26.14678315360242 30 21.69015398841446 24.60308146497545 29.43580941123574 24.270955135374354 31 22.594911920776063 24.814036119622035 26.613937429039638 25.977114530562268 32 23.002823568668425 25.377477338634534 27.90638816504798 23.713310927649054 33 22.57836923002965 23.093454891475705 26.26130947415452 28.066866404340125 34 19.610440841499813 24.25794720760794 30.824264309780975 25.30734764111127 35 18.438313437330773 23.177865031438184 29.500000706952594 28.88382082427845 36 21.19655968588682 23.719814891532263 29.729194738576 25.354430684004914 37 18.191021419249754 24.39170263877126 29.907912354844957 27.50936358713403 38 20.685291568459167 24.746875623001976 26.985653104016766 27.58217970452209 39 21.670217925207243 24.36978710829524 30.319924327794123 23.640070638703392 40 24.214398927694305 22.47840613295516 28.733098530811112 24.574096408539422 41 18.363093681116307 25.763190675012478 27.69189874742139 28.181816896449824 42 19.53960419138055 21.67983248051285 30.754841564853706 28.025721763252886 43 21.928962575343473 20.546304688085446 30.6301351269192 26.894597609651882 44 20.93173524342499 22.293325943322195 29.43496106812054 27.339977745132277 45 20.701975649724783 20.843931731001707 27.58260387607969 30.871488743193815 46 23.10886645806852 22.89296313524993 28.54830112221655 25.449869284465 47 16.87778627691899 22.733474629592187 34.89588709118699 25.492852002301834 48 19.351130629286782 24.270530963816753 29.959802675391405 26.41853573150506 49 20.90034654816256 20.174306232069913 33.91845443195652 25.006892787811008 50 21.339646891317347 21.479199333767873 29.860970702470517 27.32018307244426 51 19.107656155224166 20.93512861588579 27.23888352390419 32.71833170498585 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 88.0 1 278.5 2 469.0 3 1154.0 4 1839.0 5 1299.0 6 759.0 7 794.5 8 830.0 9 918.0 10 1006.0 11 982.0 12 958.0 13 998.5 14 1039.0 15 993.5 16 948.0 17 917.5 18 887.0 19 956.0 20 1025.0 21 1172.5 22 1320.0 23 1679.5 24 2039.0 25 2636.5 26 3676.0 27 4118.0 28 5456.5 29 6795.0 30 7918.5 31 9042.0 32 11027.0 33 13012.0 34 14734.0 35 16456.0 36 17796.5 37 19137.0 38 21138.5 39 23140.0 40 26033.0 41 28926.0 42 33111.0 43 37296.0 44 42299.5 45 47303.0 46 71397.5 47 95492.0 48 89968.0 49 84444.0 50 82444.0 51 80444.0 52 68364.5 53 56285.0 54 50176.5 55 44068.0 56 38197.0 57 32326.0 58 29332.5 59 26339.0 60 23916.5 61 21494.0 62 18570.0 63 15646.0 64 12975.5 65 10305.0 66 8747.5 67 7190.0 68 5970.0 69 4750.0 70 3712.5 71 2675.0 72 2241.5 73 1808.0 74 1417.0 75 897.0 76 768.0 77 549.0 78 330.0 79 238.0 80 146.0 81 96.0 82 46.0 83 24.5 84 3.0 85 4.0 86 5.0 87 5.0 88 5.0 89 2.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 707261.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.26147069250826 #Duplication Level Percentage of deduplicated Percentage of total 1 68.65561748943851 19.403087215538246 2 12.751528735669984 7.207539112956283 3 5.277302808758966 4.474330159956992 4 2.8090013680967316 3.175460393587256 5 1.5115786827054363 2.1359718320349965 6 1.0265109976169404 1.7406426284813148 7 0.7160698638108366 1.4166031228914837 8 0.5836461936243537 1.3195759836726941 9 0.44739290907339063 1.1379583429032278 >10 5.792160669664355 40.0047729431828 >50 0.3507415862121264 6.043890860758924 >100 0.06680792118286272 3.49382491986892 >500 0.005061206150216872 0.996968791103184 >1k 0.005061206150216872 3.541313246790908 >5k 0.0010122412300433744 2.424622378477772 >10k+ 5.061206150216872E-4 1.4834380677949959 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGC 10371 1.4663610746245022 No Hit GAATCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTC 8605 1.2166654177170804 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCG 8346 1.180045273244248 No Hit GCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 4784 0.6764122438534007 No Hit CCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 3359 0.4749307539932217 No Hit CTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGCT 3176 0.44905628897959876 No Hit TCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 2665 0.3768057336683346 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCT 2043 0.2888608307258565 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCCTGACTT 2021 0.2857502393034537 No Hit GAACTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCT 1947 0.27528734088264445 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTC 1908 0.2697731106338396 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCCTGACTTCGTA 1755 0.24814036119622038 No Hit TCCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTG 1100 0.15552957112013813 No Hit GCCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTG 968 0.13686602258572153 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 961 0.13587628895132065 No Hit CGCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTG 838 0.1184852550897052 No Hit TGCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTG 733 0.10363925057369204 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.46673010387961444 0.0 2 0.0 0.0 0.0 2.0955488850650608 0.0 3 0.0 0.0 0.0 2.9127860860417867 0.0 4 0.0 0.0 0.0 4.016197697879567 0.0 5 0.0 0.0 0.0 6.5895051473218516 0.0 6 0.0 0.0 0.0 7.433747937465801 0.0 7 0.0 0.0 0.0 8.492055973678742 0.0 8 0.0 0.0 0.0 9.97877728306806 0.0 9 0.0 0.0 0.0 10.533593680409354 0.0 10 0.0 0.0 0.0 12.866537247211426 0.0 11 0.0 0.0 0.0 14.832855197727572 0.0 12 0.0 0.0 0.0 18.27797658855783 0.0 13 0.0 0.0 0.0 19.01886290916649 0.0 14 0.0 0.0 0.0 19.32525616427316 0.0 15 0.0 0.0 0.0 19.95288867900252 0.0 16 0.0 0.0 0.0 20.819895342737688 0.0 17 0.0 0.0 0.0 21.874527225451423 0.0 18 0.0 0.0 0.0 22.987553392594812 0.0 19 0.0 0.0 0.0 24.10892160037101 0.0 20 0.0 0.0 0.0 25.005478882619006 0.0 21 0.0 0.0 0.0 26.198673474148865 0.0 22 0.0 0.0 0.0 27.414349158231545 0.0 23 0.0 0.0 0.0 28.4918863050557 0.0 24 0.0 0.0 0.0 29.362851903328473 0.0 25 0.0 0.0 0.0 30.130885203623556 0.0 26 0.0 0.0 0.0 30.83416164612498 0.0 27 0.0 0.0 0.0 31.54281092835601 0.0 28 0.0 0.0 0.0 32.24340095099263 0.0 29 0.0 0.0 0.0 32.993760436387696 0.0 30 0.0 0.0 0.0 33.91972694662932 0.0 31 0.0 0.0 0.0 34.642798061818766 0.0 32 0.0 0.0 0.0 35.34225696030178 0.0 33 0.0 0.0 0.0 36.057410206416016 0.0 34 0.0 0.0 0.0 36.77256345253026 0.0 35 1.4139051920012555E-4 0.0 0.0 37.557846396167754 0.0 36 1.4139051920012555E-4 0.0 0.0 38.195659028279515 0.0 37 1.4139051920012555E-4 0.0 0.0 38.88748283872573 0.0 38 1.4139051920012555E-4 0.0 0.0 39.6347317326984 0.0 39 1.4139051920012555E-4 0.0 0.0 40.68738414814333 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTGTG 20 7.0314447E-4 45.0 18 TATTGCG 40 6.8084773E-9 45.0 1 AACGGTC 20 7.0314447E-4 45.0 13 ATCCGGT 20 7.0314447E-4 45.0 29 AACGCGC 20 7.0314447E-4 45.0 32 GATGCGA 20 7.0314447E-4 45.0 16 CAATCGG 25 3.8892787E-5 45.0 20 TGCGATA 30 2.1643136E-6 44.999996 11 ACGCGCA 30 2.1643136E-6 44.999996 15 TTCTTCG 135 0.0 41.666668 1 CGACCAA 265 0.0 41.603775 29 TGTTTCG 115 0.0 41.08696 1 CGGGATA 115 0.0 41.08696 6 ACACGAC 275 0.0 40.909092 26 TACGGCT 1435 0.0 40.296165 7 CACGACC 280 0.0 40.17857 27 CTACGGC 140 0.0 40.17857 6 ACGACCA 275 0.0 40.090908 28 TTATCCG 45 1.9264917E-8 40.0 1 ACGTGAG 225 0.0 40.0 44 >>END_MODULE