##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933904.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 250908 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33336920305451 33.0 31.0 34.0 31.0 34.0 2 32.560161493455766 34.0 31.0 34.0 31.0 34.0 3 32.61760485915156 34.0 31.0 34.0 31.0 34.0 4 36.011880848757315 37.0 35.0 37.0 35.0 37.0 5 36.03422369952333 37.0 35.0 37.0 35.0 37.0 6 35.63153028201572 37.0 35.0 37.0 35.0 37.0 7 35.91635579574984 37.0 35.0 37.0 35.0 37.0 8 35.89790281696877 37.0 35.0 37.0 35.0 37.0 9 37.72179444258453 39.0 38.0 39.0 35.0 39.0 10 37.50491415180066 39.0 37.0 39.0 35.0 39.0 11 37.486154287627336 39.0 37.0 39.0 35.0 39.0 12 37.33941922935897 39.0 37.0 39.0 35.0 39.0 13 37.26208012498605 39.0 37.0 39.0 34.0 39.0 14 38.367549061807516 40.0 38.0 41.0 34.0 41.0 15 38.44796897667671 40.0 38.0 41.0 34.0 41.0 16 38.53111897587961 40.0 38.0 41.0 34.0 41.0 17 38.51142251343122 40.0 38.0 41.0 34.0 41.0 18 38.470885742981494 40.0 38.0 41.0 34.0 41.0 19 38.50876815406444 40.0 38.0 41.0 34.0 41.0 20 38.431604412772806 40.0 38.0 41.0 34.0 41.0 21 38.356820029652305 40.0 38.0 41.0 34.0 41.0 22 38.3639062923462 40.0 37.0 41.0 34.0 41.0 23 38.31231367672613 40.0 37.0 41.0 34.0 41.0 24 38.248158687646466 40.0 37.0 41.0 34.0 41.0 25 38.143008592790984 40.0 37.0 41.0 34.0 41.0 26 38.054565816952824 40.0 37.0 41.0 34.0 41.0 27 38.014367816091955 40.0 37.0 41.0 34.0 41.0 28 37.93702871171904 40.0 37.0 41.0 34.0 41.0 29 37.89870789293287 40.0 37.0 41.0 34.0 41.0 30 37.78679436287404 40.0 36.0 41.0 33.0 41.0 31 37.74408946705565 40.0 36.0 41.0 33.0 41.0 32 37.67219458925184 40.0 36.0 41.0 33.0 41.0 33 37.596358027643596 40.0 36.0 41.0 33.0 41.0 34 37.562895563314044 40.0 36.0 41.0 33.0 41.0 35 37.52924577932948 40.0 36.0 41.0 33.0 41.0 36 37.422672852200805 40.0 36.0 41.0 33.0 41.0 37 37.33747827889107 40.0 35.0 41.0 33.0 41.0 38 37.27330734771311 40.0 35.0 41.0 32.0 41.0 39 37.22906802493344 39.0 35.0 41.0 32.0 41.0 40 37.08474022350822 39.0 35.0 41.0 32.0 41.0 41 36.96176686275447 39.0 35.0 41.0 31.0 41.0 42 36.97726258230108 39.0 35.0 41.0 32.0 41.0 43 36.890003507261625 39.0 35.0 41.0 31.0 41.0 44 36.764949702679864 39.0 35.0 41.0 31.0 41.0 45 36.7628931719993 39.0 35.0 41.0 31.0 41.0 46 36.66741195976214 39.0 35.0 41.0 31.0 41.0 47 36.58963046216143 39.0 35.0 41.0 31.0 41.0 48 36.566590144594834 39.0 35.0 41.0 31.0 41.0 49 36.56464520860236 39.0 35.0 41.0 31.0 41.0 50 36.50200073333652 39.0 35.0 40.0 31.0 41.0 51 35.57400720582843 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 8.0 10 11.0 11 15.0 12 6.0 13 5.0 14 6.0 15 10.0 16 14.0 17 31.0 18 52.0 19 95.0 20 165.0 21 219.0 22 402.0 23 571.0 24 762.0 25 1051.0 26 1447.0 27 1807.0 28 2107.0 29 2404.0 30 3084.0 31 4027.0 32 5425.0 33 7968.0 34 14540.0 35 16852.0 36 19287.0 37 29911.0 38 55726.0 39 82850.0 40 50.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.20362842157285 4.717266886667623 52.14540787858498 16.93369681317455 2 21.987740526408086 5.903757552569069 48.75292936056243 23.35557256046041 3 22.131219411098886 5.894192293589683 48.66843623957786 23.306152055733577 4 20.280341798587532 5.148102093197507 48.452022255169226 26.11953385304574 5 19.68251311237585 6.317056450970076 46.969008560906786 27.031421875747284 6 21.880131362889983 7.369633491160106 51.06971479586143 19.68052035008848 7 77.4945398313326 3.08081049627752 13.01592615620068 6.408723516189201 8 76.64761585919939 4.743969901318412 11.06660608669313 7.54180815278907 9 69.88617341814529 6.4593396782884565 14.425207645830342 9.229279257735904 10 35.895228529979114 26.386962552011095 21.564477816570218 16.153331101439573 11 27.60015623256333 24.17818483268768 27.712946578028603 20.50871235672039 12 24.994021713137883 21.289476620912843 32.7331133323768 20.983388333572464 13 24.500215218327035 22.41299599853333 32.690866771884515 20.39592201125512 14 19.623128796212157 25.22996476796276 32.35966967972325 22.78723675610184 15 17.71167121016468 25.30529118242543 34.36797551293701 22.615062094472872 16 21.028026208809603 26.159389098793184 28.76193664610136 24.05064804629585 17 21.10972946259187 26.35547690787061 28.154941253367767 24.37985237616975 18 21.962631721587194 24.552027037798716 30.475313660784032 23.01002757983006 19 22.263538826980408 26.01192468952764 28.279289620099796 23.44524686339216 20 22.98452022255169 27.445517879063242 29.74556411114831 19.824397787236755 21 23.980104261322875 26.60776061345194 30.166435506241328 19.24569961898385 22 22.132813620928786 24.435649720216173 29.599295359255184 23.832241299599854 23 21.961037511757297 25.07971049149489 28.9516476158592 24.007604380888612 24 22.967781019337767 24.803513638465095 28.000701452325156 24.228003889871985 25 21.53259361997226 26.819790520828352 25.43482073110463 26.21279512809476 26 20.014108756994595 26.64243467725222 26.323194158815184 27.020262406938002 27 20.927192437068566 26.98359558085035 27.862802302038997 24.22640968004209 28 17.50123551261817 26.390150971670888 29.326685478342657 26.78192803736828 29 19.570121319368056 25.838952922983722 27.297654917340218 27.293270840308004 30 20.42182792099096 28.194796499115217 27.694613164984776 23.68876241490905 31 20.053166897827094 27.128668675371053 28.013853683421814 24.804310743380043 32 20.5585314139047 26.58902864795064 25.402139429591724 27.45030050855294 33 20.521466035359573 26.30246943102651 26.194063162593462 26.982001371020452 34 17.858737066972754 24.458367210292216 30.356545028456644 27.32635069427838 35 18.18435442472938 25.955330240566266 26.190874742933666 29.66944059177069 36 20.12092081559775 26.970443349753694 26.333955075166994 26.574680759481563 37 19.01812616576594 27.27015479777448 29.120235305370894 24.591483731088687 38 19.64305641908588 26.945733097390278 27.1326541999458 26.278556283578048 39 20.78849618186746 25.112391793007795 28.22389082851085 25.875221196613897 40 22.214516874711048 25.003985524574745 28.599725795909258 24.18177180480495 41 18.60642147719483 24.79514403685813 27.0218566167679 29.576577869179143 42 19.523092129386068 23.62140704959587 27.68345369617549 29.17204712484257 43 20.898098107672933 23.054665455067198 28.166499274634525 27.880737162625348 44 20.626285331675355 23.56720391537934 27.622076617724424 28.184434135220876 45 20.666539129880274 22.423358362427663 27.01308846270346 29.8970140449886 46 20.89690245030051 24.04745962663606 29.25016340650756 25.805474516555872 47 17.018987039074084 24.573548870502336 32.398329268098266 26.009134822325315 48 17.733990147783253 24.248728617660657 30.37846541361774 27.63881582093835 49 20.33414638034658 22.481547021218933 31.745898895212587 25.4384077032219 50 19.874615396878536 22.483539783506306 29.20672118864285 28.43512363097231 51 18.409138010744975 22.405423501841312 27.85283849060213 31.332599996811577 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 58.0 1 116.5 2 175.0 3 565.0 4 955.0 5 678.5 6 402.0 7 453.5 8 505.0 9 602.5 10 700.0 11 722.5 12 745.0 13 710.0 14 675.0 15 695.5 16 716.0 17 697.5 18 679.0 19 725.0 20 771.0 21 843.0 22 915.0 23 1028.5 24 1142.0 25 1325.5 26 1839.0 27 2169.0 28 2479.5 29 2790.0 30 3240.5 31 3691.0 32 4207.0 33 4723.0 34 5267.5 35 5812.0 36 6349.5 37 6887.0 38 7501.5 39 8116.0 40 9109.0 41 10102.0 42 11621.5 43 13141.0 44 14448.5 45 15756.0 46 19849.5 47 23943.0 48 27227.5 49 30512.0 50 29505.5 51 28499.0 52 23557.0 53 18615.0 54 16457.0 55 14299.0 56 13312.5 57 12326.0 58 11313.5 59 10301.0 60 9498.0 61 8695.0 62 7647.5 63 6600.0 64 5664.5 65 4729.0 66 4019.0 67 3309.0 68 2862.5 69 2416.0 70 1946.0 71 1476.0 72 1231.5 73 987.0 74 768.0 75 406.0 76 263.0 77 185.5 78 108.0 79 96.0 80 84.0 81 60.0 82 36.0 83 27.5 84 19.0 85 11.5 86 4.0 87 3.0 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 250908.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.538119026068784 #Duplication Level Percentage of deduplicated Percentage of total 1 71.59021208028277 36.18034659214838 2 10.8295279068265 10.946079407026627 3 5.973956847650729 9.057376266695139 4 4.119535386876154 8.327742788561977 5 2.779479509779048 7.023483314786643 6 1.7055082964496988 5.171590877155362 7 1.0805000826636606 3.8224509249733267 8 0.6441289228405562 2.6042451336519608 9 0.38409619092945313 1.747034911318711 >10 0.8163943841066158 6.363395665489686 >50 0.035564099193469166 1.2813056247393408 >100 0.03240284593182746 2.9923758542852683 >500 0.005532193207872982 1.6675345957876397 >1k 0.0031612532616417037 2.815038043379948 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGC 2044 0.8146412230777815 TruSeq Adapter, Index 22 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGCT 2026 0.8074672788432413 TruSeq Adapter, Index 20 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGC 1609 0.6412709040763945 TruSeq Adapter, Index 22 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGC 1369 0.5456183142825258 TruSeq Adapter, Index 22 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTG 761 0.3032984201380586 No Hit GAATCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTC 622 0.24789962854910963 No Hit TCCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTG 591 0.23554450236740163 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCC 570 0.22717490076043811 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCG 557 0.2219937188132702 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGC 539 0.21481977457873005 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 535 0.21322556474883225 No Hit CGTTCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTC 448 0.17855150094855485 No Hit GCCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTG 419 0.16699347968179573 No Hit CGGCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCT 386 0.15384124858513878 No Hit TTCCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCT 380 0.15144993384029207 No Hit TGCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTG 379 0.1510513813828176 No Hit CGTCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCT 289 0.11518166021011686 No Hit TTCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTG 284 0.11318889792274459 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTC 256 0.10202942911345993 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.985524574744528E-4 0.0 0.0 0.8473225245906866 0.0 2 3.985524574744528E-4 0.0 0.0 3.014650788336761 0.0 3 3.985524574744528E-4 0.0 0.0 4.349004415961229 0.0 4 3.985524574744528E-4 0.0 0.0 5.8750617756309085 0.0 5 3.985524574744528E-4 0.0 0.0 8.217354568208268 0.0 6 3.985524574744528E-4 0.0 0.0 9.47598322891259 0.0 7 3.985524574744528E-4 0.0 0.0 10.539719737911904 0.0 8 3.985524574744528E-4 0.0 0.0 11.982878186426898 0.0 9 3.985524574744528E-4 0.0 0.0 12.679149329634766 0.0 10 3.985524574744528E-4 0.0 0.0 14.110351204425527 0.0 11 3.985524574744528E-4 0.0 0.0 16.224273438870025 0.0 12 3.985524574744528E-4 0.0 0.0 18.13692668228992 0.0 13 3.985524574744528E-4 0.0 0.0 18.810878887879223 0.0 14 3.985524574744528E-4 0.0 0.0 19.113778755559807 0.0 15 3.985524574744528E-4 0.0 0.0 19.541824094887367 0.0 16 3.985524574744528E-4 0.0 0.0 20.388748067020583 0.0 17 3.985524574744528E-4 0.0 0.0 21.530202305227412 0.0 18 3.985524574744528E-4 0.0 0.0 22.631004192771854 0.0 19 3.985524574744528E-4 0.0 0.0 23.405391617644714 0.0 20 3.985524574744528E-4 0.0 0.0 24.182967462177373 0.0 21 3.985524574744528E-4 0.0 0.0 25.08768154064438 0.0 22 3.985524574744528E-4 0.0 0.0 25.991199961738964 0.0 23 3.985524574744528E-4 0.0 0.0 26.811819471678863 0.0 24 3.985524574744528E-4 0.0 0.0 27.49374272641765 0.0 25 3.985524574744528E-4 0.0 0.0 28.083201811022366 0.0 26 3.985524574744528E-4 0.0 0.0 28.606501187686323 0.0 27 3.985524574744528E-4 0.0 0.0 29.164474628150558 0.0 28 3.985524574744528E-4 0.0 0.0 29.70730307523076 0.0 29 3.985524574744528E-4 0.0 0.0 30.257704019002983 0.0 30 3.985524574744528E-4 0.0 0.0 30.85553270521466 0.0 31 3.985524574744528E-4 0.0 0.0 31.38002773925104 0.0 32 3.985524574744528E-4 0.0 0.0 31.898943038882777 0.0 33 3.985524574744528E-4 0.0 0.0 32.39514084843847 0.0 34 3.985524574744528E-4 0.0 0.0 32.879382084269935 0.0 35 3.985524574744528E-4 0.0 0.0 33.37677555119805 0.0 36 3.985524574744528E-4 0.0 0.0 33.861016787029506 0.0 37 3.985524574744528E-4 0.0 0.0 34.35043920480814 0.0 38 3.985524574744528E-4 0.0 0.0 34.86257911266281 0.0 39 3.985524574744528E-4 0.0 0.0 35.50982830360132 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAGGG 35 1.2068631E-7 45.000004 3 TTGCGCG 35 1.2068631E-7 45.000004 1 TCGCCAC 20 7.0227374E-4 45.0 42 CGTGGCA 25 3.8820624E-5 45.0 15 GCACGTG 25 3.8820624E-5 45.0 12 CGCGACC 25 3.8820624E-5 45.0 10 GCGTTAG 20 7.0227374E-4 45.0 1 TCTACGG 20 7.0227374E-4 45.0 2 GACGGGA 20 7.0227374E-4 45.0 4 AATTCCG 20 7.0227374E-4 45.0 11 TTGTGCG 60 0.0 44.999996 1 CGTGCGG 65 0.0 44.999996 2 GGCACGT 30 2.1586984E-6 44.999996 11 TTCGGGT 30 2.1586984E-6 44.999996 4 TGTGTCG 30 2.1586984E-6 44.999996 1 CGGGAAT 70 0.0 41.785717 6 CGTTTTT 410 0.0 41.15854 1 TATGGGA 55 6.002665E-11 40.909092 4 TCGGGAT 95 0.0 40.263157 5 TTTGGGC 485 0.0 39.896908 4 >>END_MODULE