##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933902.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1592498 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.44087653485279 33.0 31.0 34.0 31.0 34.0 2 32.664339295873525 34.0 31.0 34.0 31.0 34.0 3 32.720854908452004 34.0 31.0 34.0 31.0 34.0 4 36.10181990809408 37.0 35.0 37.0 35.0 37.0 5 36.12434803685782 37.0 35.0 37.0 35.0 37.0 6 35.729584589745166 37.0 35.0 37.0 35.0 37.0 7 36.05403648858586 37.0 35.0 37.0 35.0 37.0 8 36.06066004478499 37.0 36.0 37.0 35.0 37.0 9 37.92004950712654 39.0 38.0 39.0 35.0 39.0 10 37.62919827842798 39.0 37.0 39.0 35.0 39.0 11 37.5499435478098 39.0 37.0 39.0 35.0 39.0 12 37.234589933550936 39.0 37.0 39.0 35.0 39.0 13 37.088808902742734 39.0 37.0 39.0 33.0 39.0 14 37.93970290700522 40.0 37.0 41.0 33.0 41.0 15 38.093486459637624 40.0 37.0 41.0 33.0 41.0 16 38.2940776063769 40.0 37.0 41.0 33.0 41.0 17 38.31395581030557 40.0 37.0 41.0 34.0 41.0 18 38.29749111144881 40.0 37.0 41.0 34.0 41.0 19 38.311428334603875 40.0 37.0 41.0 34.0 41.0 20 38.20811203530554 40.0 37.0 41.0 34.0 41.0 21 38.150949640125134 40.0 36.0 41.0 34.0 41.0 22 38.21100685840736 40.0 36.0 41.0 34.0 41.0 23 38.17916192045453 40.0 36.0 41.0 34.0 41.0 24 38.138378823709665 40.0 36.0 41.0 34.0 41.0 25 38.0391554651874 40.0 36.0 41.0 34.0 41.0 26 37.98519621374721 40.0 36.0 41.0 34.0 41.0 27 37.965483159162524 40.0 36.0 41.0 34.0 41.0 28 37.885593576883615 40.0 36.0 41.0 34.0 41.0 29 37.85733420073369 40.0 36.0 41.0 34.0 41.0 30 37.758887609278005 40.0 36.0 41.0 34.0 41.0 31 37.638747426998336 40.0 35.0 41.0 33.0 41.0 32 37.568550164584195 40.0 35.0 41.0 33.0 41.0 33 37.51735512383689 40.0 35.0 41.0 33.0 41.0 34 37.40073080154575 40.0 35.0 41.0 33.0 41.0 35 37.36075021758269 40.0 35.0 41.0 33.0 41.0 36 37.270810387203 39.0 35.0 41.0 32.0 41.0 37 37.172397076793814 39.0 35.0 41.0 32.0 41.0 38 37.1492353522579 39.0 35.0 41.0 32.0 41.0 39 37.10476119907215 39.0 35.0 41.0 32.0 41.0 40 36.93431263335967 39.0 35.0 41.0 32.0 41.0 41 36.773251834539195 39.0 35.0 41.0 31.0 41.0 42 36.8110741740335 39.0 35.0 41.0 31.0 41.0 43 36.77128322924111 39.0 35.0 41.0 32.0 41.0 44 36.7081057558628 39.0 35.0 41.0 31.0 41.0 45 36.724453029140385 39.0 35.0 41.0 32.0 41.0 46 36.65104069204482 39.0 35.0 41.0 32.0 41.0 47 36.5533570528817 38.0 35.0 40.0 31.0 41.0 48 36.49056576523173 38.0 35.0 40.0 31.0 41.0 49 36.496753528104904 38.0 35.0 40.0 31.0 41.0 50 36.41307241830131 38.0 35.0 40.0 31.0 41.0 51 35.42654307886101 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 30.0 10 40.0 11 33.0 12 21.0 13 23.0 14 31.0 15 46.0 16 68.0 17 125.0 18 262.0 19 477.0 20 830.0 21 1298.0 22 2009.0 23 3071.0 24 4393.0 25 6306.0 26 8758.0 27 10600.0 28 13060.0 29 15758.0 30 19785.0 31 26471.0 32 36619.0 33 57735.0 34 120192.0 35 119862.0 36 111579.0 37 179866.0 38 337694.0 39 515172.0 40 279.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.178241982093542 4.695139334554894 54.520759209744696 15.605859473606873 2 20.7294451861164 5.210744377700945 52.04044212300424 22.019368313178415 3 21.327373723546277 5.166285923122038 50.84427107600763 22.662069277324054 4 19.662756248359496 4.930555642770038 50.21023574283924 25.19645236603123 5 19.569129757148833 5.9276055605721325 49.29167885925131 25.211585823027722 6 21.85151880881483 7.127418684356275 52.56835487391507 18.452707632913825 7 82.51690112012699 2.5291711512353547 10.000640503159188 4.953287225478462 8 83.67916317634308 3.5837407645095944 7.805472911111977 4.931623148035351 9 77.76361414582624 5.193601499028571 10.628898749009418 6.413885606135769 10 42.152078055985 25.47795978393693 17.76937867425893 14.600583485819135 11 32.49134378818686 22.772399086215493 25.591115342060082 19.14514178353756 12 30.133475834820516 19.953494447088787 29.52003707382992 20.392992644260776 13 28.45058518126867 20.01170488126202 31.56349332934798 19.974216608121328 14 21.43023099558053 22.32241421967249 34.431754388388555 21.815600396358427 15 19.71412208994925 22.50363893706617 36.711631662959704 21.07060731002488 16 25.919781374921662 22.74445556603525 29.82584593512833 21.509917123914754 17 25.797143858265443 23.282415425325496 28.01466626645685 22.90577444995221 18 26.022701441383283 22.61911788900206 30.138436594582853 21.219744075031805 19 25.841916284981203 24.439402749642387 28.514635497187435 21.20404546818897 20 24.226843612990407 28.72279902392342 28.18936036340391 18.86099699968226 21 24.613908463307332 25.91067618295282 31.284937249528728 18.19047810421112 22 22.952619092771233 22.115255403774448 32.63501743801248 22.29710806544184 23 21.926872121660434 23.76342073898994 31.523932840104035 22.78577429924559 24 23.146716667776033 25.253658089366514 28.647759683214673 22.951865559642776 25 23.857047230200603 24.783516211637313 26.778557963652073 24.580878594510008 26 20.710795241187117 24.44348438742152 28.306848737015684 26.538871634375678 27 20.400527975545337 23.97987313013894 31.395518236129654 24.22408065818607 28 18.316066958953794 25.293406961892572 29.398655445721122 26.99187063343251 29 20.479460570751108 25.089764633927324 29.146849791962058 25.283925003359503 30 23.46483323683923 23.893279614793865 28.379376300629577 24.262510847737328 31 22.26797145114154 26.198588632450402 28.19350479561042 23.33993512079764 32 24.25792685453922 25.74558963339357 25.778179941199298 24.218303570867906 33 24.155195171359715 24.010642399550893 25.682795206022234 26.151367223067158 34 19.55927103205153 25.152935827862894 30.261890438794897 25.025902701290676 35 19.186523311175275 27.522295161438194 27.34979886944913 25.941382657937407 36 22.033936620328564 26.452215324603234 25.9332821768065 25.5805658782617 37 19.492897322320026 29.56386758413511 25.833815803850303 25.109419289694557 38 21.185835084251284 27.458182051092056 25.289325324113438 26.06665754054322 39 20.43211357251312 24.453343112518823 25.85987549120941 29.254667823758652 40 22.8249580219253 24.17711042651231 27.691400554349205 25.306530997213184 41 19.46721440152515 26.20744264670976 25.98584111251631 28.339501839248776 42 19.03462359136401 24.362856342676725 29.27978559470718 27.322734471252087 43 19.95211296968662 22.72310546072899 29.569895849162762 27.75488572042163 44 21.232177371651332 22.415663944318926 28.185027547915286 28.16713113611446 45 20.25082606069207 22.20379554636803 26.93523005994356 30.610148332996335 46 20.44668187966327 23.56197621598269 28.837084881739255 27.154257022614786 47 17.464700112653205 24.827032749805653 31.60952164461117 26.098745492929975 48 18.04674165995813 26.036202243268125 29.176991117100304 26.740064979673445 49 21.524862197629133 22.645303165215903 29.768765800647788 26.06106883650717 50 19.969820998205336 23.3757279443993 27.532279475390236 29.122171582005123 51 18.449002761698914 24.291333489900772 26.488133737059638 30.771530011340676 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 188.0 1 799.0 2 1410.0 3 3900.0 4 6390.0 5 4192.5 6 1995.0 7 2015.5 8 2036.0 9 2313.5 10 2591.0 11 2597.5 12 2604.0 13 2538.0 14 2472.0 15 2547.0 16 2622.0 17 2589.0 18 2556.0 19 2749.5 20 2943.0 21 3377.5 22 3812.0 23 4846.0 24 5880.0 25 7166.0 26 10553.0 27 12654.0 28 14984.0 29 17314.0 30 19858.0 31 22402.0 32 25565.5 33 28729.0 34 32552.0 35 36375.0 36 39178.5 37 41982.0 38 47109.5 39 52237.0 40 57982.5 41 63728.0 42 72169.5 43 80611.0 44 88414.5 45 96218.0 46 117075.5 47 137933.0 48 159377.5 49 180822.0 50 178126.0 51 175430.0 52 152236.0 53 129042.0 54 117363.5 55 105685.0 56 98303.0 57 90921.0 58 84934.5 59 78948.0 60 68630.0 61 58312.0 62 52014.0 63 45716.0 64 38935.0 65 32154.0 66 27411.5 67 22669.0 68 18878.5 69 15088.0 70 12069.5 71 9051.0 72 7537.5 73 6024.0 74 4682.5 75 2523.5 76 1706.0 77 1341.5 78 977.0 79 603.0 80 229.0 81 189.0 82 149.0 83 92.5 84 36.0 85 29.5 86 23.0 87 26.0 88 29.0 89 18.0 90 7.0 91 5.0 92 3.0 93 2.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1592498.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.889156609112646 #Duplication Level Percentage of deduplicated Percentage of total 1 69.45187673217362 19.369542669803767 2 12.27509597386591 6.846841480140689 3 4.792281438987877 4.009580627006297 4 2.384029663209521 2.6595430655208165 5 1.4801780364717319 2.0640458534264496 6 0.9706039924559426 1.6241596050620262 7 0.697230327443477 1.3611616056285814 8 0.5429521630414326 1.2113982325055181 9 0.42267904875535656 1.0609345967516008 >10 6.489355179805864 44.61383697617515 >50 0.4017986535105936 6.876648054555089 >100 0.08304544325660128 4.305410257212687 >500 0.0047779560888282085 0.876298198756607 >1k 0.0034128257777344346 2.004000703340417 >5k 6.82565155546887E-4 1.1165980741144108 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGCT 6883 0.432214043596915 RNA PCR Primer, Index 16 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 5528 0.3471275945087529 RNA PCR Primer, Index 16 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 5186 0.32565190034775554 RNA PCR Primer, Index 14 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 4595 0.28854039377129514 RNA PCR Primer, Index 14 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3801 0.2386816184384533 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2850 0.17896411800831147 No Hit GAATCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTC 2642 0.1659028771150733 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 2357 0.14800646531424216 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGC 2285 0.14348526654350585 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCG 2104 0.1321194751892938 No Hit TCCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTG 1959 0.1230142832204499 RNA PCR Primer, Index 16 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTG 1918 0.12043971169822505 RNA PCR Primer, Index 16 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8838328211401208E-4 0.0 0.0 0.4518059049367723 0.0 2 1.8838328211401208E-4 0.0 0.0 1.4948213435746858 0.0 3 1.8838328211401208E-4 0.0 0.0 2.1590607963086925 0.0 4 1.8838328211401208E-4 0.0 0.0 2.8963301680755644 0.0 5 1.8838328211401208E-4 0.0 0.0 4.287038351068572 0.0 6 1.8838328211401208E-4 0.0 0.0 5.222800907756242 0.0 7 1.8838328211401208E-4 0.0 0.0 6.037935369463573 0.0 8 1.8838328211401208E-4 0.0 0.0 7.265252452436361 0.0 9 1.8838328211401208E-4 0.0 0.0 7.915237570157074 0.0 10 1.8838328211401208E-4 0.0 0.0 9.15511353860413 0.0 11 1.8838328211401208E-4 0.0 0.0 11.175461444849539 0.0 12 1.8838328211401208E-4 0.0 0.0 12.966421307907451 0.0 13 1.8838328211401208E-4 0.0 0.0 13.560896151831901 0.0 14 1.8838328211401208E-4 0.0 0.0 13.840205764779611 0.0 15 1.8838328211401208E-4 0.0 0.0 14.183565693646083 0.0 16 1.8838328211401208E-4 0.0 0.0 14.859736087580643 0.0 17 1.8838328211401208E-4 0.0 0.0 15.720459303559565 0.0 18 1.8838328211401208E-4 0.0 0.0 16.591041244635786 0.0 19 1.8838328211401208E-4 0.0 0.0 17.301748573624582 0.0 20 1.8838328211401208E-4 0.0 0.0 18.079394762191225 0.0 21 1.8838328211401208E-4 0.0 0.0 19.122410200829137 0.0 22 1.8838328211401208E-4 0.0 0.0 20.206242017258422 0.0 23 1.8838328211401208E-4 0.0 0.0 21.20065456911092 0.0 24 1.8838328211401208E-4 0.0 0.0 21.969949098837173 0.0 25 2.5117770948534943E-4 0.0 0.0 22.676386406764717 0.0 26 2.5117770948534943E-4 0.0 0.0 23.304644652614947 0.0 27 2.5117770948534943E-4 0.0 0.0 24.012023876953062 0.0 28 3.1397213685668677E-4 0.0 0.0 24.648319809506827 0.0 29 3.1397213685668677E-4 0.0 0.0 25.39174303515609 0.0 30 3.1397213685668677E-4 0.0 0.0 26.289954524275696 0.0 31 3.1397213685668677E-4 0.0 0.0 26.961729308294263 0.0 32 3.1397213685668677E-4 0.0 0.0 27.614791352956175 0.0 33 3.7676656422802417E-4 0.0 0.0 28.27538872890264 0.0 34 3.7676656422802417E-4 0.0 0.0 29.000413187332104 0.0 35 3.7676656422802417E-4 0.0 0.0 29.77686628177869 0.0 36 3.7676656422802417E-4 0.0 0.0 30.443868689317036 0.0 37 3.7676656422802417E-4 0.0 0.0 31.13812387833454 0.0 38 3.7676656422802417E-4 0.0 0.0 31.996272522791237 0.0 39 4.395609915993615E-4 0.0 0.0 33.670183573228975 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTACCG 20 7.0341065E-4 45.0 1 ATCGCAT 20 7.0341065E-4 45.0 10 CGTCATA 70 0.0 41.785713 38 TATTGCG 65 0.0 41.53846 1 ACCGGTA 45 1.9290383E-8 40.0 41 CGTTTTT 1895 0.0 39.89446 1 TCGTTTG 445 0.0 39.4382 1 ATTCGCG 40 3.4593359E-7 39.375 1 GCGATTA 40 3.4593359E-7 39.375 9 CGTTAGG 150 0.0 39.000004 2 TTTGGGC 3240 0.0 38.680557 4 TTTGGGA 7505 0.0 38.614258 4 TACGAAT 140 0.0 38.571426 12 TTGGGTA 930 0.0 38.467743 5 TCTTGCG 560 0.0 38.16964 1 ACACGCG 295 0.0 38.135593 36 GCGCGAC 195 0.0 38.076923 9 CGGGCTA 95 0.0 37.894737 6 TTCGGGC 750 0.0 37.5 4 GTACGGG 180 0.0 37.5 3 >>END_MODULE