##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933901.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1616614 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.43726084272436 33.0 31.0 34.0 31.0 34.0 2 32.65714821225104 34.0 31.0 34.0 31.0 34.0 3 32.71905167219881 34.0 31.0 34.0 31.0 34.0 4 36.08820039910579 37.0 35.0 37.0 35.0 37.0 5 36.12490922384688 37.0 35.0 37.0 35.0 37.0 6 35.74980545757985 37.0 35.0 37.0 35.0 37.0 7 36.04426041095772 37.0 35.0 37.0 35.0 37.0 8 36.04941439329364 37.0 36.0 37.0 35.0 37.0 9 37.89325837831418 39.0 38.0 39.0 35.0 39.0 10 37.604811661905686 39.0 37.0 39.0 35.0 39.0 11 37.59518289461801 39.0 37.0 39.0 35.0 39.0 12 37.422583251165705 39.0 37.0 39.0 35.0 39.0 13 37.37214820606527 39.0 37.0 39.0 35.0 39.0 14 38.614573423216676 40.0 38.0 41.0 35.0 41.0 15 38.654788341558344 40.0 38.0 41.0 35.0 41.0 16 38.705678040645445 40.0 38.0 41.0 35.0 41.0 17 38.669407786892855 40.0 38.0 41.0 35.0 41.0 18 38.63001557576515 40.0 38.0 41.0 35.0 41.0 19 38.65263260122701 40.0 38.0 41.0 35.0 41.0 20 38.61847416884921 40.0 38.0 41.0 35.0 41.0 21 38.525456911792176 40.0 38.0 41.0 34.0 41.0 22 38.51459532083726 40.0 38.0 41.0 34.0 41.0 23 38.481969103323365 40.0 38.0 41.0 34.0 41.0 24 38.46450977165854 40.0 38.0 41.0 34.0 41.0 25 38.35938882132655 40.0 37.0 41.0 34.0 41.0 26 38.276412303741026 40.0 37.0 41.0 34.0 41.0 27 38.24064433439275 40.0 37.0 41.0 34.0 41.0 28 38.166946469596326 40.0 37.0 41.0 34.0 41.0 29 38.15852269001753 40.0 37.0 41.0 34.0 41.0 30 38.06934679521518 40.0 37.0 41.0 34.0 41.0 31 37.99349813870225 40.0 37.0 41.0 34.0 41.0 32 37.9303061831705 40.0 37.0 41.0 34.0 41.0 33 37.85428308798513 40.0 37.0 41.0 33.0 41.0 34 37.82118180344844 40.0 37.0 41.0 33.0 41.0 35 37.78283003858682 40.0 37.0 41.0 33.0 41.0 36 37.659169721405355 40.0 36.0 41.0 33.0 41.0 37 37.5889272269076 40.0 36.0 41.0 33.0 41.0 38 37.58682035414762 40.0 36.0 41.0 33.0 41.0 39 37.543042433134936 40.0 36.0 41.0 33.0 41.0 40 37.413975754261685 40.0 36.0 41.0 33.0 41.0 41 37.30422413761108 40.0 35.0 41.0 33.0 41.0 42 37.289372725956845 39.0 35.0 41.0 32.0 41.0 43 37.16306242553881 39.0 35.0 41.0 32.0 41.0 44 37.03632654424619 39.0 35.0 41.0 32.0 41.0 45 37.01301361982514 39.0 35.0 41.0 32.0 41.0 46 36.88602845206091 39.0 35.0 41.0 31.0 41.0 47 36.795563443097734 39.0 35.0 41.0 31.0 41.0 48 36.74131116023986 39.0 35.0 41.0 31.0 41.0 49 36.70949404124918 39.0 35.0 41.0 31.0 41.0 50 36.61790198526055 39.0 35.0 40.0 31.0 41.0 51 35.64247123926924 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 11.0 9 31.0 10 30.0 11 26.0 12 17.0 13 12.0 14 28.0 15 31.0 16 57.0 17 106.0 18 183.0 19 390.0 20 665.0 21 1136.0 22 1708.0 23 2511.0 24 3713.0 25 5532.0 26 7578.0 27 9942.0 28 11925.0 29 14337.0 30 18307.0 31 23718.0 32 31528.0 33 45086.0 34 86642.0 35 117561.0 36 114650.0 37 184984.0 38 356941.0 39 576827.0 40 401.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.802519339805297 4.829167630615595 54.31704785434247 16.051265175236637 2 20.139563309485133 4.7269168768797005 53.02366551322702 22.109854300408138 3 21.608868907481934 4.67637914802173 51.38363270391076 22.33111924058557 4 20.059519464757823 5.0814851287938865 49.81888069755674 25.040114708891547 5 18.779498383658684 6.078445442140177 48.9218824035917 26.220173770609435 6 22.30612873574026 6.93430837540687 52.21834030881831 18.541222580034567 7 83.49185396142802 2.8663614196091336 8.767337162736435 4.8744474562264095 8 84.34196412996548 3.6415619312959064 6.989423572974129 5.027050365764493 9 77.77874000843738 6.309607611959317 9.966077245403046 5.945575134200248 10 35.772423101618564 32.29354688255824 17.090969149098054 14.843060866725144 11 30.844345032271153 24.94776118479736 24.635503589601477 19.57239019333001 12 29.234065769565277 21.473771722872623 28.645861040421522 20.646301467140578 13 25.990063181439726 21.744770241999635 30.258243464426265 22.006923112134373 14 21.095511977503598 24.639833627569725 29.94505800395147 24.319596390975214 15 19.400363970620074 25.253833011467176 34.003107730107494 21.342695287805252 16 23.02472946541351 24.251862225614772 31.143055794394954 21.580352514576763 17 21.12433765883507 25.023227560815382 29.351719086931077 24.500715693418464 18 21.928982428705925 24.559294921360326 30.2158709500227 23.29585169991105 19 23.775929195219142 27.036509642994556 28.14734995490575 21.040211206880556 20 27.393366629263387 26.039363756592483 27.718923626790314 18.848345987353817 21 26.073756629597415 26.518451528936403 27.630219706126507 19.777572135339668 22 22.98248066638047 24.82849956761478 28.520228081657095 23.668791684347653 23 23.389689808451493 25.360970522338665 28.160216353439964 23.089123315769875 24 23.926367085773105 23.099453549208405 28.22089874268069 24.7532806223378 25 22.331428529011873 24.871428801185687 26.516533940693325 26.28060872910911 26 21.585301129397617 26.935186754537572 27.62539480667618 23.854117309388638 27 21.468328246569683 27.693438260462916 28.152051138985556 22.68618235398184 28 19.94130942822467 28.248054266510124 28.55264150873369 23.257994796531516 29 22.487681041980338 26.448243056165545 28.025428457256957 23.038647444597164 30 23.34100781015134 27.03063316289479 27.39021188731509 22.238147139638777 31 22.84540403584282 29.440856011391713 25.371115182721415 22.342624770044058 32 25.014072623396803 28.800134107461645 24.425187459715183 21.76060580942637 33 23.69415333530453 27.705191220662446 25.52384180763002 23.076813636403003 34 22.31194335815476 27.484297426596576 26.902092892923108 23.301666322325552 35 23.367854045554473 26.335662068991113 25.87506974454013 24.421414140914283 36 21.840649654153683 30.676339559103162 24.64484410007584 22.838166686667318 37 21.969622927922188 30.973751309836484 25.86925512212563 21.1873706401157 38 22.674614966838096 28.828836073422597 25.551739623682586 22.94480933605672 39 23.10582489079026 26.888793490592068 25.960804496311425 24.04457712230625 40 23.866117700329205 26.46271775451654 27.399923543901018 22.271241001253237 41 20.953301159089307 27.151626795264672 26.92262964442965 24.97244240121637 42 22.79795919124788 25.539862948112535 25.87148199879501 25.79069586184457 43 22.389141749360082 25.1128593467581 26.721715882702984 25.776283021178838 44 22.3263561988205 25.624298688493358 26.450469932834924 25.59887517985122 45 23.37107064518803 24.958586279717977 25.29168991484671 26.378653160247286 46 22.381038392590934 27.458440914157617 26.31419745220566 23.84632324104579 47 20.716448082226183 27.322972583436737 28.192691638201822 23.767887696135258 48 21.28102317560036 25.48685091184414 28.608746429265118 24.623379483290382 49 22.522445061096835 25.049950080847992 28.455772373615467 23.971832484439698 50 21.403686965472275 25.211522354748876 27.2552384180763 26.12955226170255 51 19.89355529520343 24.455683298548696 26.412674887140653 29.23808651910722 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 185.0 1 737.5 2 1290.0 3 2946.0 4 4602.0 5 3294.0 6 1986.0 7 1997.5 8 2009.0 9 2147.5 10 2286.0 11 2239.0 12 2192.0 13 2193.0 14 2194.0 15 2254.0 16 2314.0 17 2406.5 18 2499.0 19 2794.0 20 3089.0 21 3580.0 22 4071.0 23 4931.0 24 5791.0 25 7024.0 26 11608.5 27 14960.0 28 16156.5 29 17353.0 30 21122.0 31 24891.0 32 29445.0 33 33999.0 34 38215.5 35 42432.0 36 45171.5 37 47911.0 38 52968.0 39 58025.0 40 65989.0 41 73953.0 42 82870.5 43 91788.0 44 100934.0 45 110080.0 46 125518.5 47 140957.0 48 160675.5 49 180394.0 50 174804.5 51 169215.0 52 147434.0 53 125653.0 54 110154.5 55 94656.0 56 88712.5 57 82769.0 58 78603.5 59 74438.0 60 69742.5 61 65047.0 62 56382.0 63 47717.0 64 38961.5 65 30206.0 66 24039.5 67 17873.0 68 14865.5 69 11858.0 70 9466.5 71 7075.0 72 5740.0 73 4405.0 74 3560.0 75 2253.5 76 1792.0 77 1398.0 78 1004.0 79 693.0 80 382.0 81 306.5 82 231.0 83 130.5 84 30.0 85 25.5 86 21.0 87 17.5 88 14.0 89 9.0 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1616614.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.4950504730698 #Duplication Level Percentage of deduplicated Percentage of total 1 67.9898683318354 18.69384861441184 2 12.586868503536639 6.921531696052649 3 5.326854333474708 4.393863862847331 4 2.7023639061466302 2.972065279844146 5 1.6650963776062326 2.2890954472404528 6 1.1000302065645542 1.814723163083629 7 0.7448950845767949 1.43366495633064 8 0.5954467358324725 1.3097470444590793 9 0.4701667274900673 1.1634532112787708 >10 6.122199755431773 42.17230008000735 >50 0.6103128755604746 10.193059733406763 >100 0.0792896893873455 3.80711051121839 >500 0.003645502100363502 0.6356668327102459 >1k 0.0022784388127271888 1.0711803658729175 >5k 6.835316438181567E-4 1.1286892012358825 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTCTGCT 6829 0.42242613264514595 Illumina PCR Primer Index 8 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTCTGC 6060 0.3748575726796873 Illumina PCR Primer Index 8 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTCTGC 5128 0.31720621001673865 RNA PCR Primer, Index 40 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTCTGC 4424 0.27365839959322386 RNA PCR Primer, Index 40 (95% over 24bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2081 0.12872584302746357 No Hit TCCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTCTG 1751 0.108312806891441 Illumina PCR Primer Index 8 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.7114611156404683E-4 0.0 0.0 0.44834450276936855 0.0 2 3.7114611156404683E-4 0.0 0.0 1.511801827770884 0.0 3 3.7114611156404683E-4 0.0 0.0 2.1547506083703345 0.0 4 3.7114611156404683E-4 0.0 0.0 2.8671037118322618 0.0 5 3.7114611156404683E-4 0.0 0.0 4.019636103609148 0.0 6 3.7114611156404683E-4 0.0 0.0 4.788960135196157 0.0 7 3.7114611156404683E-4 0.0 0.0 5.4788588989084595 0.0 8 3.7114611156404683E-4 0.0 0.0 6.627370541143402 0.0 9 3.7114611156404683E-4 0.0 0.0 7.160769361146198 0.0 10 3.7114611156404683E-4 0.0 0.0 8.243464426263783 0.0 11 3.7114611156404683E-4 0.0 0.0 10.191424792807684 0.0 12 3.7114611156404683E-4 0.0 0.0 12.029464052643364 0.0 13 3.7114611156404683E-4 0.0 0.0 12.611111867149486 0.0 14 3.7114611156404683E-4 0.0 0.0 12.82427345055777 0.0 15 3.7114611156404683E-4 0.0 0.0 13.159356531614844 0.0 16 3.7114611156404683E-4 0.0 0.0 13.897442432145212 0.0 17 3.7114611156404683E-4 0.0 0.0 14.878381605008988 0.0 18 3.7114611156404683E-4 0.0 0.0 15.90843577996974 0.0 19 3.7114611156404683E-4 0.0 0.0 16.692976802130875 0.0 20 3.7114611156404683E-4 0.0 0.0 17.579397431916338 0.0 21 3.7114611156404683E-4 0.0 0.0 18.804179600077692 0.0 22 3.7114611156404683E-4 0.0 0.0 20.119335846404894 0.0 23 3.7114611156404683E-4 0.0 0.0 21.343252006972598 0.0 24 3.7114611156404683E-4 0.0 0.0 22.231590225001145 0.0 25 3.7114611156404683E-4 0.0 0.0 23.05188498924295 0.0 26 3.7114611156404683E-4 0.0 0.0 23.751990271023264 0.0 27 3.7114611156404683E-4 0.0 0.0 24.406135292654895 0.0 28 4.948614820853958E-4 0.0 0.0 25.09158030302843 0.0 29 4.948614820853958E-4 0.0 0.0 25.839068571718418 0.0 30 4.948614820853958E-4 0.0 0.0 26.720726159738813 0.0 31 4.948614820853958E-4 0.0 0.0 27.519061445713078 0.0 32 4.948614820853958E-4 0.0 0.0 28.28127184349511 0.0 33 5.567191673460703E-4 0.0 0.0 29.035193311452208 0.0 34 5.567191673460703E-4 0.0 0.0 29.784413595329497 0.0 35 6.185768526067447E-4 0.0 0.0 30.54322182042219 0.0 36 6.804345378674192E-4 0.0 0.0 31.302710480052752 0.0 37 6.804345378674192E-4 0.0 0.0 32.050322464113265 0.0 38 6.804345378674192E-4 0.0 0.0 32.79972832104634 0.0 39 6.804345378674192E-4 0.0 0.0 33.64031240605364 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATCG 30 2.1660526E-6 45.000004 9 TCTCGGC 20 7.0341385E-4 45.0 13 CGGTCTA 20 7.0341385E-4 45.0 31 TATTGCG 100 0.0 42.75 1 GGCGATA 190 0.0 41.44737 8 CGATATC 50 1.0822987E-9 40.5 10 TCTTGCG 485 0.0 39.432987 1 ACATACG 395 0.0 39.303795 17 CGTTTGG 1025 0.0 39.29268 2 CGTTTTT 1540 0.0 39.155846 1 TGGGCGA 1900 0.0 39.07895 6 CATACGA 395 0.0 38.734177 18 TTTTGCG 1305 0.0 38.620693 1 TTTGGGA 9815 0.0 38.604176 4 ACCGCGT 35 6.2498675E-6 38.571426 24 TTCGGGA 1750 0.0 38.057144 4 TTGGGAC 3395 0.0 37.776142 5 CGAATAT 340 0.0 37.72059 14 TTTGGGC 3450 0.0 37.630436 4 GTCGAAC 30 1.1401271E-4 37.500004 35 >>END_MODULE