##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933898.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 877131 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.48122458332906 33.0 31.0 34.0 31.0 34.0 2 32.69948844585358 34.0 31.0 34.0 31.0 34.0 3 32.763750226591014 34.0 31.0 34.0 31.0 34.0 4 36.12510217972002 37.0 35.0 37.0 35.0 37.0 5 36.15526187080379 37.0 35.0 37.0 35.0 37.0 6 35.73872431826033 37.0 35.0 37.0 35.0 37.0 7 36.0703942740594 37.0 35.0 37.0 35.0 37.0 8 36.05979380503026 37.0 36.0 37.0 35.0 37.0 9 37.94691556905411 39.0 38.0 39.0 35.0 39.0 10 37.649021639869076 39.0 37.0 39.0 35.0 39.0 11 37.55879338434054 39.0 37.0 39.0 35.0 39.0 12 37.395948837744875 39.0 37.0 39.0 35.0 39.0 13 37.34492453236746 39.0 37.0 39.0 35.0 39.0 14 38.630847615692524 40.0 38.0 41.0 35.0 41.0 15 38.68203609267031 40.0 38.0 41.0 35.0 41.0 16 38.7464973875054 40.0 38.0 41.0 35.0 41.0 17 38.70231812579877 40.0 38.0 41.0 35.0 41.0 18 38.653017622225185 40.0 38.0 41.0 35.0 41.0 19 38.64700825760348 40.0 38.0 41.0 35.0 41.0 20 38.584806602434526 40.0 38.0 41.0 35.0 41.0 21 38.52190721796402 40.0 38.0 41.0 34.0 41.0 22 38.50953620382816 40.0 38.0 41.0 34.0 41.0 23 38.45197353645008 40.0 38.0 41.0 34.0 41.0 24 38.433775570581815 40.0 37.0 41.0 34.0 41.0 25 38.341836054135584 40.0 37.0 41.0 34.0 41.0 26 38.28445693972736 40.0 37.0 41.0 34.0 41.0 27 38.265857665502644 40.0 37.0 41.0 34.0 41.0 28 38.21051587505173 40.0 37.0 41.0 34.0 41.0 29 38.19539612669031 40.0 37.0 41.0 34.0 41.0 30 38.134604751171715 40.0 37.0 41.0 34.0 41.0 31 38.08055467199312 40.0 37.0 41.0 34.0 41.0 32 38.00414647298978 40.0 37.0 41.0 34.0 41.0 33 37.93879705539994 40.0 37.0 41.0 34.0 41.0 34 37.89976867765476 40.0 37.0 41.0 34.0 41.0 35 37.854881425921555 40.0 37.0 41.0 34.0 41.0 36 37.75926856991715 40.0 36.0 41.0 33.0 41.0 37 37.69363983259057 40.0 36.0 41.0 33.0 41.0 38 37.65847746801789 40.0 36.0 41.0 33.0 41.0 39 37.61154263160235 40.0 36.0 41.0 33.0 41.0 40 37.49574008899469 40.0 36.0 41.0 33.0 41.0 41 37.368291623486115 40.0 35.0 41.0 33.0 41.0 42 37.34678742399938 40.0 35.0 41.0 33.0 41.0 43 37.259828919511456 39.0 35.0 41.0 33.0 41.0 44 37.15314018088518 39.0 35.0 41.0 33.0 41.0 45 37.144699024433066 39.0 35.0 41.0 33.0 41.0 46 37.0686533710472 39.0 35.0 41.0 33.0 41.0 47 36.985721631090456 39.0 35.0 41.0 32.0 41.0 48 36.939711400007525 39.0 35.0 41.0 32.0 41.0 49 36.93459015814057 39.0 35.0 41.0 32.0 41.0 50 36.83815074373155 39.0 35.0 41.0 32.0 41.0 51 35.9094034984512 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 24.0 10 23.0 11 18.0 12 10.0 13 11.0 14 11.0 15 19.0 16 31.0 17 59.0 18 94.0 19 241.0 20 412.0 21 663.0 22 1075.0 23 1526.0 24 2122.0 25 3028.0 26 3995.0 27 5111.0 28 5971.0 29 7180.0 30 9209.0 31 11908.0 32 15824.0 33 23871.0 34 46549.0 35 65809.0 36 59596.0 37 95698.0 38 185957.0 39 330887.0 40 195.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.321531219395965 4.865065765546993 53.24723444958621 16.566168565470836 2 19.3728188833823 6.391861648944114 52.7787753482661 21.45654411940748 3 20.609692280856564 6.359369353038486 51.128508740427606 21.90242962567735 4 19.5558018129561 4.626104880570861 51.549084458307824 24.26900884816521 5 19.56629055409055 5.915992023996416 49.15069698824919 25.367020433663846 6 21.656628257352665 7.759616294487369 51.997592149861305 18.586163298298658 7 83.17902342979555 2.695492463497471 9.60780088721069 4.5176832194962895 8 84.1128634149289 4.469343803833179 6.810499229875583 4.607293551362339 9 78.99515579770868 5.040638171493198 8.928426882643528 7.035779148154608 10 41.189628459146924 25.212881542209775 17.58904884219119 16.008441156452115 11 29.335298832215486 25.303403938522294 24.907567968752673 20.453729260509547 12 27.479589707808756 21.31357801742271 29.25492315286998 21.951909121898552 13 24.530771344303187 22.615664022819853 31.220992075300043 21.632572557576918 14 20.709449329689637 24.9239851287892 29.940111568283417 24.42645397323775 15 19.200552711054563 24.612287104206786 33.736693834786365 22.45046634995229 16 21.186573043251236 24.01636699649197 30.977014835868307 23.82004512438849 17 21.6892345613141 24.650137778735445 28.454016560810185 25.206611099140265 18 21.845197581661118 24.250881567291547 30.15615683404189 23.74776401700544 19 23.326960283013598 26.186852362987967 27.627572164249127 22.858615189749308 20 25.71235083470998 25.441695710218887 28.987574261997352 19.858379193073784 21 25.804811367971258 25.5815835946968 27.98658353199237 20.627021505339567 22 23.751982315070382 23.47824897307244 28.38583974343627 24.38392896842091 23 22.772539107613344 25.708474560812466 27.800180360744292 23.718805970829898 24 23.896202505669052 23.14922172400702 28.765486569280984 24.189089201042947 25 21.74965883089299 26.359346551427326 27.121262388400364 24.76973222927932 26 21.565877844928522 26.433451787703323 28.14425667317653 23.85641369419163 27 22.191440047153733 26.78824485738162 28.134908012600167 22.885407082864475 28 20.286365434581608 25.10309178446549 30.463636560559372 24.146906220393532 29 21.375940423950357 23.477222900570155 30.68321607604793 24.463620599431557 30 23.481441198635096 24.76562793927019 28.893061583731505 22.85986927836321 31 22.92861613601617 26.235533802818505 27.129698984530247 23.706151076635077 32 23.105670646687894 25.006412953139268 28.75898811009986 23.128928290072974 33 23.919346140998325 23.670694571278407 27.206198389978237 25.20376089774504 34 21.424393847669275 23.35272610362648 30.096758636965287 25.126121411738957 35 21.84770575888892 22.73810867475896 30.286696057943452 25.12748950840866 36 23.19037863215415 24.48653621864921 28.00630692564737 24.316778223549278 37 22.390042080373398 24.721050789448782 29.45318316192222 23.435723968255598 38 21.58822342386713 24.322706642451354 28.990652479504202 25.098417454177312 39 22.450922382175527 23.811380512146986 30.34347206973645 23.39422503594104 40 23.910111488477774 22.835813578587462 30.605690598097663 22.6483843348371 41 20.119571648932713 23.845810945001375 30.72790723392515 25.30671017214076 42 21.33307339496609 22.418430086269897 29.93885747966951 26.309639039094503 43 21.963309927479475 22.53403425486045 28.689215179944615 26.813440637715463 44 21.996372263664153 22.531298061521028 28.931368290483405 26.540961384331418 45 22.337484366645345 22.24160359170979 28.585239833046604 26.83567220859826 46 23.39981143067569 23.237463959203357 29.57391769302419 23.78880691709676 47 20.07317037021836 23.418166727660978 31.946995374693177 24.56166752742749 48 20.74524785921373 22.192124095488587 31.536110341556732 25.526517703740947 49 21.559037361579968 21.245743224216223 32.39550306624666 24.799716347957144 50 21.609428922247645 21.403758389567805 30.624615935361994 26.362196752822552 51 19.9612144594137 21.25988022313657 29.248652709800478 29.530252607649253 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 150.0 1 493.0 2 836.0 3 1579.5 4 2323.0 5 1665.0 6 1007.0 7 1023.0 8 1039.0 9 1142.5 10 1246.0 11 1277.0 12 1308.0 13 1293.0 14 1278.0 15 1250.5 16 1223.0 17 1297.5 18 1372.0 19 1468.0 20 1564.0 21 1808.0 22 2052.0 23 2338.0 24 2624.0 25 3686.0 26 6051.5 27 7355.0 28 8663.5 29 9972.0 30 11196.5 31 12421.0 32 14841.5 33 17262.0 34 19391.0 35 21520.0 36 23941.5 37 26363.0 38 28847.5 39 31332.0 40 35212.5 41 39093.0 42 44119.5 43 49146.0 44 54018.5 45 58891.0 46 70808.0 47 82725.0 48 87744.5 49 92764.0 50 90653.0 51 88542.0 52 76945.5 53 65349.0 54 58173.0 55 50997.0 56 47925.0 57 44853.0 58 43048.0 59 41243.0 60 37545.0 61 33847.0 62 29810.5 63 25774.0 64 22775.5 65 19777.0 66 16197.5 67 12618.0 68 10436.0 69 8254.0 70 7153.0 71 6052.0 72 4671.0 73 3290.0 74 2806.5 75 1786.0 76 1249.0 77 1021.5 78 794.0 79 559.5 80 325.0 81 225.5 82 126.0 83 99.5 84 73.0 85 46.5 86 20.0 87 12.5 88 5.0 89 4.5 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 877131.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.800198766445227 #Duplication Level Percentage of deduplicated Percentage of total 1 70.17024387085354 19.507467270996628 2 12.199106698128338 6.782751819620822 3 4.607568228935714 3.8427393778311254 4 2.2523993993129046 2.5046860400928233 5 1.2863670410013377 1.7880629713220588 6 0.8364139942168327 1.3951485174158589 7 0.5992864659386518 1.1662198009794518 8 0.48244938383885155 1.0729751012375282 9 0.3770905331105742 0.9434872596076881 >10 6.680410053524155 47.731517351875965 >50 0.445185014501242 7.423316939538137 >100 0.05559626424490065 2.5608303687082437 >500 0.004563872438014233 0.8214680608026353 >1k 0.003319179954919442 2.4593291199710463 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTGCTGTTCTCGTATGCCGTCTTCTGC 3688 0.42046170982441616 TruSeq Adapter, Index 23 (95% over 24bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCTGTTCTCGTATGC 3114 0.3550210857899219 No Hit CTGTCTCTTATACACATCTGACGCTGCTGTTCTCGTATGCCGTCTTCTGCT 3068 0.34977671522269765 Illumina PCR Primer Index 5 (95% over 24bp) GAATGATACCTGTCTCTTATACACATCTGACGCTGCTGTTCTCGTATGCCG 2714 0.3094178634662325 No Hit GCTGTCTCTTATACACATCTGACGCTGCTGTTCTCGTATGCCGTCTTCTGC 2714 0.3094178634662325 TruSeq Adapter, Index 23 (95% over 24bp) GAATCTGTCTCTTATACACATCTGACGCTGCTGTTCTCGTATGCCGTCTTC 2582 0.294368800099415 TruSeq Adapter, Index 23 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTGCTGTTCTCGTATGCCGTCTTCTGC 2268 0.25857027057531884 TruSeq Adapter, Index 23 (95% over 24bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1174 0.13384545752002835 No Hit TCCTGTCTCTTATACACATCTGACGCTGCTGTTCTCGTATGCCGTCTTCTG 980 0.11172789469303902 Illumina PCR Primer Index 5 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1400805580922348E-4 0.0 0.0 0.36208958525009377 0.0 2 1.1400805580922348E-4 0.0 0.0 1.4225925203874905 0.0 3 1.1400805580922348E-4 0.0 0.0 2.013040241423459 0.0 4 1.1400805580922348E-4 0.0 0.0 2.6657363609312634 0.0 5 1.1400805580922348E-4 0.0 0.0 3.9129844914841683 0.0 6 1.1400805580922348E-4 0.0 0.0 4.541738919272036 0.0 7 1.1400805580922348E-4 0.0 0.0 5.167529137608863 0.0 8 1.1400805580922348E-4 0.0 0.0 6.083355849924356 0.0 9 1.1400805580922348E-4 0.0 0.0 6.491048657498139 0.0 10 1.1400805580922348E-4 0.0 0.0 7.6380837069947365 0.0 11 1.1400805580922348E-4 0.0 0.0 9.254375914202097 0.0 12 1.1400805580922348E-4 0.0 0.0 11.05821137321563 0.0 13 1.1400805580922348E-4 0.0 0.0 11.53396699010752 0.0 14 1.1400805580922348E-4 0.0 0.0 11.714783766620949 0.0 15 1.1400805580922348E-4 0.0 0.0 12.035374419556486 0.0 16 1.1400805580922348E-4 0.0 0.0 12.686930458506199 0.0 17 1.1400805580922348E-4 0.0 0.0 13.517023112853154 0.0 18 1.1400805580922348E-4 0.0 0.0 14.401725625932729 0.0 19 1.1400805580922348E-4 0.0 0.0 15.118836296972743 0.0 20 1.1400805580922348E-4 0.0 0.0 15.816337582413574 0.0 21 1.1400805580922348E-4 0.0 0.0 16.814706127134944 0.0 22 1.1400805580922348E-4 0.0 0.0 17.812504631577266 0.0 23 1.1400805580922348E-4 0.0 0.0 18.719324707483832 0.0 24 1.1400805580922348E-4 0.0 0.0 19.450344361332572 0.0 25 1.1400805580922348E-4 0.0 0.0 20.143171316485223 0.0 26 1.1400805580922348E-4 0.0 0.0 20.732136932795672 0.0 27 1.1400805580922348E-4 0.0 0.0 21.293968631823525 0.0 28 1.1400805580922348E-4 0.0 0.0 21.887380562310533 0.0 29 1.1400805580922348E-4 0.0 0.0 22.505532240908142 0.0 30 1.1400805580922348E-4 0.0 0.0 23.204287614962873 0.0 31 1.1400805580922348E-4 0.0 0.0 23.854361549187065 0.0 32 1.1400805580922348E-4 0.0 0.0 24.445949350781127 0.0 33 1.1400805580922348E-4 0.0 0.0 25.048481925732872 0.0 34 2.2801611161844695E-4 0.0 0.0 25.64599814622901 0.0 35 2.2801611161844695E-4 0.0 0.0 26.28797750849075 0.0 36 3.4202416742767043E-4 0.0 0.0 26.908637364316164 0.0 37 3.4202416742767043E-4 0.0 0.0 27.50524152036583 0.0 38 3.4202416742767043E-4 0.0 0.0 28.100249563634165 0.0 39 3.4202416742767043E-4 0.0 0.0 28.733222289486974 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGCG 30 2.1649103E-6 45.000004 1 GATTCGC 20 7.032372E-4 45.0 11 TACACGG 20 7.032372E-4 45.0 16 TACGTTG 20 7.032372E-4 45.0 17 ACGAACG 25 3.8900478E-5 45.0 21 CGATTCG 70 0.0 41.785713 10 ACAAGCG 70 0.0 41.785713 14 TGTTTCG 275 0.0 40.909092 1 TTTCGCG 190 0.0 40.263157 1 CTTACGG 90 0.0 40.000004 2 CGGGATC 270 0.0 40.0 6 TGCGTTG 135 0.0 40.0 1 TTGGGCA 1120 0.0 39.57589 5 TTGCACG 40 3.4569712E-7 39.375 1 TTTGGGC 2055 0.0 38.759125 4 CGTTTTT 785 0.0 38.694267 1 TGGGCGA 890 0.0 38.679775 6 GGGCGAT 1335 0.0 38.426968 7 TTGGGAC 1550 0.0 37.887096 5 AACGGCG 30 1.1397012E-4 37.500004 14 >>END_MODULE