SRR2933895.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933895.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	518067
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	3869	0.7468146012002308	No Hit
CTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGCT	3511	0.6777115701250996	No Hit
TCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	2980	0.5752151748712039	No Hit
GCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	2374	0.4582418876322947	No Hit
TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC	1734	0.3347057426935126	No Hit
TCCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG	1092	0.21078354730179688	No Hit
CGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG	805	0.1553853073058118	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	800	0.15442018117347756	No Hit
TGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG	620	0.1196756404094451	No Hit
GCCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG	603	0.11639421155950871	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTATCCG	35	1.2101918E-7	45.000004	1
ATACGTA	45	3.8380676E-10	45.000004	19
GAGTGCG	20	7.029696E-4	45.0	9
CGGCGCG	20	7.029696E-4	45.0	17
ACACGCG	20	7.029696E-4	45.0	36
GCGACAT	20	7.029696E-4	45.0	37
GGTGTCG	20	7.029696E-4	45.0	8
CACGGGA	25	3.8878294E-5	45.0	4
CACGGCG	20	7.029696E-4	45.0	15
CGCGGAA	20	7.029696E-4	45.0	4
GGCGTTA	20	7.029696E-4	45.0	8
GACGTAT	20	7.029696E-4	45.0	17
TAGCGCG	20	7.029696E-4	45.0	1
GCGCCCC	25	3.8878294E-5	45.0	9
GAATACG	20	7.029696E-4	45.0	15
TACGGGT	50	2.1827873E-11	45.0	4
CCGCTCG	20	7.029696E-4	45.0	1
ACGGGTA	40	6.8030204E-9	45.0	5
TCTAGCG	25	3.8878294E-5	45.0	1
CCCACTA	20	7.029696E-4	45.0	34