##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933895.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 518067 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.372679595496336 33.0 31.0 34.0 31.0 34.0 2 32.60383309494718 34.0 31.0 34.0 31.0 34.0 3 32.6551758749351 34.0 31.0 34.0 31.0 34.0 4 36.039363634433386 37.0 35.0 37.0 35.0 37.0 5 36.08770487214974 37.0 35.0 37.0 35.0 37.0 6 35.70018163673811 37.0 35.0 37.0 35.0 37.0 7 36.04145023713149 37.0 35.0 37.0 35.0 37.0 8 36.05731691074707 37.0 36.0 37.0 35.0 37.0 9 37.92612538532661 39.0 38.0 39.0 35.0 39.0 10 37.534733924376575 39.0 37.0 39.0 35.0 39.0 11 37.47129618369825 39.0 37.0 39.0 35.0 39.0 12 37.329144685919005 39.0 37.0 39.0 35.0 39.0 13 37.26155690287164 39.0 37.0 39.0 34.0 39.0 14 38.47702324216752 40.0 38.0 41.0 34.0 41.0 15 38.535816795897055 40.0 38.0 41.0 34.0 41.0 16 38.585789096777056 40.0 38.0 41.0 35.0 41.0 17 38.583492096582106 40.0 38.0 41.0 35.0 41.0 18 38.54868192724107 40.0 38.0 41.0 35.0 41.0 19 38.579689499620706 40.0 38.0 41.0 35.0 41.0 20 38.50852109862238 40.0 38.0 41.0 34.0 41.0 21 38.425385133583106 40.0 38.0 41.0 34.0 41.0 22 38.41798068589584 40.0 37.0 41.0 34.0 41.0 23 38.36276195936047 40.0 37.0 41.0 34.0 41.0 24 38.336576157137976 40.0 37.0 41.0 34.0 41.0 25 38.270206363269615 40.0 37.0 41.0 34.0 41.0 26 38.2309701254857 40.0 37.0 41.0 34.0 41.0 27 38.22399419380119 40.0 37.0 41.0 34.0 41.0 28 38.17426124420201 40.0 37.0 41.0 34.0 41.0 29 38.17349686430519 40.0 37.0 41.0 34.0 41.0 30 38.110887201848406 40.0 37.0 41.0 34.0 41.0 31 38.023363773411546 40.0 37.0 41.0 34.0 41.0 32 37.93602371893983 40.0 37.0 41.0 34.0 41.0 33 37.87453746330108 40.0 37.0 41.0 34.0 41.0 34 37.86941264353838 40.0 37.0 41.0 34.0 41.0 35 37.84422671198899 40.0 37.0 41.0 34.0 41.0 36 37.75796373828096 40.0 36.0 41.0 33.0 41.0 37 37.6871466431948 40.0 36.0 41.0 33.0 41.0 38 37.65302557391225 40.0 36.0 41.0 33.0 41.0 39 37.616628737209666 40.0 36.0 41.0 33.0 41.0 40 37.52248261325273 40.0 36.0 41.0 33.0 41.0 41 37.431172029872585 40.0 36.0 41.0 33.0 41.0 42 37.44596934373353 40.0 36.0 41.0 33.0 41.0 43 37.3619628349229 40.0 36.0 41.0 33.0 41.0 44 37.280496538092564 39.0 35.0 41.0 33.0 41.0 45 37.30183740713074 39.0 35.0 41.0 33.0 41.0 46 37.22643982342052 39.0 35.0 41.0 33.0 41.0 47 37.14735738813705 39.0 35.0 41.0 32.0 41.0 48 37.1146357517464 39.0 35.0 41.0 32.0 41.0 49 37.14261668857503 39.0 35.0 41.0 32.0 41.0 50 37.06837532597135 39.0 35.0 41.0 32.0 41.0 51 36.145396251836154 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 3.0 10 12.0 11 11.0 12 10.0 13 4.0 14 3.0 15 5.0 16 13.0 17 29.0 18 47.0 19 86.0 20 195.0 21 258.0 22 481.0 23 744.0 24 1107.0 25 1697.0 26 2374.0 27 2957.0 28 3494.0 29 4488.0 30 5558.0 31 7476.0 32 10012.0 33 14530.0 34 27357.0 35 39955.0 36 35274.0 37 55834.0 38 114632.0 39 189331.0 40 89.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.95179387994217 4.590911986287488 57.276568474733956 16.18072565903638 2 18.678665114743843 5.133312872659328 54.328301165679335 21.859720846917483 3 20.08137943547842 4.697654936523654 54.53425908231947 20.686706545678454 4 19.258705920276718 5.32904045229671 52.019912482362315 23.39234114506425 5 18.037242287194513 6.242821874390764 51.3603452835251 24.359590554889618 6 19.62661200192253 7.060476733704328 54.556456983363155 18.756454281009987 7 81.47343876371202 2.6367245935371297 10.222615993684215 5.667220649066627 8 83.2249496686722 3.30825935641529 7.650554851013479 5.816236123899032 9 77.8107850915036 4.95688781566863 10.942986138858487 6.289340953969274 10 37.136702395636085 24.952178000142837 21.521154599694633 16.38996500452644 11 25.531639729996314 26.672032767962445 26.023081956580906 21.773245545460338 12 23.064005234844142 22.0925092700365 32.8712309411717 21.972254553947657 13 21.64391864372755 24.541806368674322 32.90018472514173 20.9140902624564 14 19.169142215196104 26.088710533579633 31.622550751157668 23.119596500066596 15 16.409460552399594 25.205813147720274 36.123899032364534 22.260827267515594 16 18.059633213464668 25.072432716231685 31.667911679377376 25.200022390926268 17 18.53698459851718 25.16411969880344 29.5152943538191 26.78360134886028 18 18.809150167835433 24.481389472790198 33.13162197167548 23.577838387698886 19 21.353222652668478 25.53723746156385 30.64063142412082 22.46890846164685 20 22.32085811294678 26.001849181669552 32.07789726039296 19.599395444990705 21 22.772151092426267 26.732063613393635 30.597007722939313 19.898777571240785 22 20.705043942192805 25.022439182576772 29.269766265753272 25.002750609477154 23 19.091932124609365 26.09392221469424 29.4396284650441 25.374517195652302 24 20.35894971113775 23.92103724035694 31.076868435935896 24.64314461256942 25 18.526947286740906 26.210509451480213 28.85900858383182 26.40353467794706 26 17.65003368290202 26.344661983874673 29.48923594824608 26.51606838497723 27 18.171008769136037 26.860039338541153 31.549394190326733 23.419557701996073 28 16.257549699170184 24.414988794885602 35.46220855603619 23.865252949908022 29 19.710771000662078 22.14288885414435 32.36280249465803 25.78353765053555 30 21.25883331692619 24.040133805086985 31.64629285401309 23.054740023973732 31 20.360107862496548 27.301295006244363 29.8017437898959 22.536853341363184 32 20.184261881185254 26.29775685384323 27.556088305180605 25.961892959790916 33 20.201827176793735 26.17151835573391 28.377603669023504 25.249050798448845 34 17.99574186350414 24.428500560738282 31.223181557597762 26.352576018159812 35 18.20420910808834 23.904823121333727 28.62699226161867 29.263975508959266 36 20.03312312886171 24.624807216055068 30.717455464254623 24.624614190828602 37 18.575203593357617 25.042320780902855 34.818276400542786 21.564199225196738 38 20.182138603694117 26.261854161720393 30.450115525598044 23.105891708987446 39 22.86827765520676 24.381016355027437 30.372133334105435 22.378572655660367 40 22.789330337581816 22.648228897034553 30.4404642642747 24.12197650110893 41 17.36840987748689 24.02951741763131 29.725112774988567 28.876959929893236 42 18.669785954326372 24.753941092561387 28.440915943304628 28.13535700980761 43 19.980234216809794 24.71340579500335 30.362096022329162 24.9442639658577 44 20.671843603240507 22.373360974545765 30.092246755728507 26.862548666485225 45 22.141151627106144 21.860492947823353 28.21005777245028 27.78829765262022 46 22.03923430753165 21.923226146425076 31.742805467246516 24.294734078796758 47 17.790363022543414 22.81249336475784 34.65980268961351 24.737340923085238 48 18.348785002712003 22.64417536727875 32.70175479233381 26.305284837675437 49 21.067545317497544 20.967558250187718 33.98440742220601 23.98048901010873 50 22.066450864463476 20.6299571290972 31.27703559578201 26.02655641065731 51 18.9846100986938 20.722223187348355 28.632396967959746 31.660769745998103 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 49.0 1 189.0 2 329.0 3 918.5 4 1508.0 5 1065.5 6 623.0 7 675.0 8 727.0 9 800.5 10 874.0 11 947.5 12 1021.0 13 934.5 14 848.0 15 870.0 16 892.0 17 839.0 18 786.0 19 1197.5 20 1609.0 21 1462.0 22 1315.0 23 1553.5 24 1792.0 25 2138.0 26 3447.0 27 4410.0 28 5306.0 29 6202.0 30 7109.0 31 8016.0 32 9173.0 33 10330.0 34 12363.5 35 14397.0 36 15315.5 37 16234.0 38 18228.5 39 20223.0 40 22557.0 41 24891.0 42 29205.0 43 33519.0 44 38719.0 45 43919.0 46 50470.0 47 57021.0 48 65373.5 49 73726.0 50 69151.0 51 64576.0 52 52490.0 53 40404.0 54 32977.0 55 25550.0 56 21713.0 57 17876.0 58 16199.5 59 14523.0 60 12430.0 61 10337.0 62 8300.5 63 6264.0 64 5405.0 65 4546.0 66 3498.5 67 2451.0 68 2052.5 69 1654.0 70 1416.5 71 1179.0 72 847.0 73 515.0 74 380.5 75 153.5 76 61.0 77 57.5 78 54.0 79 30.5 80 7.0 81 21.0 82 35.0 83 36.5 84 38.0 85 19.5 86 1.0 87 1.0 88 1.0 89 1.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 518067.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.55747086346553 #Duplication Level Percentage of deduplicated Percentage of total 1 66.66769792919962 20.371962370058387 2 13.674751176229002 8.357316212655173 3 5.870874713541053 5.381972490062617 4 3.070767926790075 3.7533960580540864 5 1.793991593346532 2.740992292149438 6 1.1631670311221498 2.132606559771528 7 0.8389306400450729 1.7944919012752063 8 0.5872154313787519 1.4355054747946843 9 0.4405515487102166 1.2115927002210352 >10 5.541504491789241 40.24047689218985 >50 0.275202149713286 5.2054886661716 >100 0.06832164737661624 3.685343151041988 >500 0.0031926003447016937 0.6528567441437151 >1k 0.003831120413642032 3.0359984874107013 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 3869 0.7468146012002308 No Hit CTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGCT 3511 0.6777115701250996 No Hit TCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 2980 0.5752151748712039 No Hit GCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 2374 0.4582418876322947 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 1734 0.3347057426935126 No Hit TCCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG 1092 0.21078354730179688 No Hit CGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG 805 0.1553853073058118 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 800 0.15442018117347756 No Hit TGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG 620 0.1196756404094451 No Hit GCCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG 603 0.11639421155950871 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9302522646684695E-4 0.0 0.0 0.7020327486599224 0.0 2 1.9302522646684695E-4 0.0 0.0 2.6114382888699725 0.0 3 1.9302522646684695E-4 0.0 0.0 3.638525518900065 0.0 4 1.9302522646684695E-4 0.0 0.0 4.667156950741893 0.0 5 1.9302522646684695E-4 0.0 0.0 6.275443137663661 0.0 6 1.9302522646684695E-4 0.0 0.0 7.293072131596879 0.0 7 1.9302522646684695E-4 0.0 0.0 8.254337759401777 0.0 8 1.9302522646684695E-4 0.0 0.0 9.830195708277115 0.0 9 1.9302522646684695E-4 0.0 0.0 10.47760231784692 0.0 10 1.9302522646684695E-4 0.0 0.0 11.824725373359044 0.0 11 3.860504529336939E-4 0.0 0.0 14.479787363410525 0.0 12 3.860504529336939E-4 0.0 0.0 16.99799446789701 0.0 13 3.860504529336939E-4 0.0 0.0 17.785730417108212 0.0 14 3.860504529336939E-4 0.0 0.0 18.032609681759308 0.0 15 3.860504529336939E-4 0.0 0.0 18.39182962821411 0.0 16 3.860504529336939E-4 0.0 0.0 19.33205550633412 0.0 17 3.860504529336939E-4 0.0 0.0 20.749053693827246 0.0 18 3.860504529336939E-4 0.0 0.0 22.43300576952402 0.0 19 3.860504529336939E-4 0.0 0.0 23.517421491814765 0.0 20 3.860504529336939E-4 0.0 0.0 24.701631256188872 0.0 21 3.860504529336939E-4 0.0 0.0 26.266100716702667 0.0 22 3.860504529336939E-4 0.0 0.0 27.80489782209637 0.0 23 3.860504529336939E-4 0.0 0.0 29.299492150629167 0.0 24 3.860504529336939E-4 0.0 0.0 30.36923795570843 0.0 25 3.860504529336939E-4 0.0 0.0 31.35250845933055 0.0 26 3.860504529336939E-4 0.0 0.0 32.18560533676146 0.0 27 3.860504529336939E-4 0.0 0.0 33.00345322130149 0.0 28 3.860504529336939E-4 0.0 0.0 33.90198565050466 0.0 29 3.860504529336939E-4 0.0 0.0 34.7978157265373 0.0 30 3.860504529336939E-4 0.0 0.0 35.770276817477274 0.0 31 3.860504529336939E-4 0.0 0.0 36.63696008431342 0.0 32 3.860504529336939E-4 0.0 0.0 37.46445923017679 0.0 33 3.860504529336939E-4 0.0 0.0 38.323035437501325 0.0 34 3.860504529336939E-4 0.0 0.0 39.14262054907956 0.0 35 3.860504529336939E-4 0.0 0.0 40.00332003389523 0.0 36 3.860504529336939E-4 0.0 0.0 40.784879175859494 0.0 37 3.860504529336939E-4 0.0 0.0 41.544433442006536 0.0 38 3.860504529336939E-4 0.0 0.0 42.313831994703385 0.0 39 3.860504529336939E-4 0.0 0.0 43.14017298920796 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATCCG 35 1.2101918E-7 45.000004 1 ATACGTA 45 3.8380676E-10 45.000004 19 GAGTGCG 20 7.029696E-4 45.0 9 CGGCGCG 20 7.029696E-4 45.0 17 ACACGCG 20 7.029696E-4 45.0 36 GCGACAT 20 7.029696E-4 45.0 37 GGTGTCG 20 7.029696E-4 45.0 8 CACGGGA 25 3.8878294E-5 45.0 4 CACGGCG 20 7.029696E-4 45.0 15 CGCGGAA 20 7.029696E-4 45.0 4 GGCGTTA 20 7.029696E-4 45.0 8 GACGTAT 20 7.029696E-4 45.0 17 TAGCGCG 20 7.029696E-4 45.0 1 GCGCCCC 25 3.8878294E-5 45.0 9 GAATACG 20 7.029696E-4 45.0 15 TACGGGT 50 2.1827873E-11 45.0 4 CCGCTCG 20 7.029696E-4 45.0 1 ACGGGTA 40 6.8030204E-9 45.0 5 TCTAGCG 25 3.8878294E-5 45.0 1 CCCACTA 20 7.029696E-4 45.0 34 >>END_MODULE