##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933894.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 935397 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33406991897558 33.0 31.0 34.0 31.0 34.0 2 32.53041970414701 34.0 31.0 34.0 31.0 34.0 3 32.605414599362625 34.0 31.0 34.0 31.0 34.0 4 36.024725330528106 37.0 35.0 37.0 35.0 37.0 5 36.046780137203775 37.0 35.0 37.0 35.0 37.0 6 35.42725281351127 37.0 35.0 37.0 33.0 37.0 7 35.89031715945208 37.0 35.0 37.0 35.0 37.0 8 35.82579589201163 37.0 35.0 37.0 35.0 37.0 9 37.720189395518695 39.0 38.0 39.0 35.0 39.0 10 37.51428537829392 39.0 37.0 39.0 35.0 39.0 11 37.50901809605975 39.0 37.0 39.0 35.0 39.0 12 37.352775345655374 39.0 37.0 39.0 35.0 39.0 13 37.26627303700995 39.0 37.0 39.0 34.0 39.0 14 38.51104290477733 40.0 38.0 41.0 34.0 41.0 15 38.501857500077506 40.0 38.0 41.0 34.0 41.0 16 38.64421523695287 40.0 38.0 41.0 35.0 41.0 17 38.531943121476765 40.0 38.0 41.0 34.0 41.0 18 38.49651752143742 40.0 38.0 41.0 34.0 41.0 19 38.51929501591303 40.0 38.0 41.0 34.0 41.0 20 38.39166471562342 40.0 38.0 41.0 34.0 41.0 21 38.41745376562037 40.0 38.0 41.0 34.0 41.0 22 38.4140445179961 40.0 38.0 41.0 34.0 41.0 23 38.315700178640725 40.0 37.0 41.0 34.0 41.0 24 38.30153613920079 40.0 37.0 41.0 34.0 41.0 25 38.220522409201656 40.0 37.0 41.0 34.0 41.0 26 38.13299807461431 40.0 37.0 41.0 34.0 41.0 27 38.0798441731158 40.0 37.0 41.0 34.0 41.0 28 38.00809709674074 40.0 37.0 41.0 34.0 41.0 29 38.01101885081949 40.0 37.0 41.0 34.0 41.0 30 37.99328306590677 40.0 37.0 41.0 34.0 41.0 31 37.912347377637516 40.0 37.0 41.0 34.0 41.0 32 37.775384141706674 40.0 37.0 41.0 33.0 41.0 33 37.67385933459269 40.0 36.0 41.0 33.0 41.0 34 37.59206304916522 40.0 36.0 41.0 33.0 41.0 35 37.599776351645346 40.0 36.0 41.0 33.0 41.0 36 37.36011875171719 40.0 36.0 41.0 32.0 41.0 37 37.361641099982144 40.0 36.0 41.0 33.0 41.0 38 37.290912842354636 40.0 36.0 41.0 32.0 41.0 39 37.322933471028875 40.0 36.0 41.0 33.0 41.0 40 37.283375935565324 40.0 36.0 41.0 33.0 41.0 41 37.045258858003606 39.0 35.0 41.0 31.0 41.0 42 37.074135367122196 39.0 35.0 41.0 32.0 41.0 43 36.85215475354315 39.0 35.0 41.0 31.0 41.0 44 36.906083727016444 39.0 35.0 41.0 31.0 41.0 45 36.968140800109474 39.0 35.0 41.0 32.0 41.0 46 36.894027883347924 39.0 35.0 41.0 31.0 41.0 47 36.72919626639812 39.0 35.0 41.0 31.0 41.0 48 36.71842650767535 39.0 35.0 41.0 31.0 41.0 49 36.784198580923395 39.0 35.0 41.0 31.0 41.0 50 36.652706818602155 39.0 35.0 41.0 31.0 41.0 51 35.786971734995944 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 3.0 9 10.0 10 16.0 11 16.0 12 10.0 13 9.0 14 13.0 15 13.0 16 37.0 17 57.0 18 118.0 19 309.0 20 658.0 21 1267.0 22 1936.0 23 2474.0 24 3168.0 25 4119.0 26 4938.0 27 5948.0 28 6741.0 29 8348.0 30 11064.0 31 14747.0 32 19850.0 33 28043.0 34 49491.0 35 68394.0 36 67156.0 37 106623.0 38 207263.0 39 322340.0 40 215.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.97444507519267 4.385838312502606 48.96338132365188 14.676335288652838 2 19.51086009469776 12.150242089722333 47.097756353719326 21.24114146186058 3 20.28518372412997 12.749773625530123 46.06161875652798 20.903423893811933 4 19.413575198552056 4.682076166590229 52.51748722734839 23.386861407509326 5 23.693576096566485 5.929140247402975 44.9884915175054 25.38879213852514 6 20.893695404197363 12.647677937816779 48.9441381573813 17.514488500604557 7 75.65258387615098 2.917905445495335 16.048586856703626 5.380923821650059 8 74.70849275762056 8.939092171559242 9.816687459976887 6.53572761084331 9 68.81719740388306 6.012206581804303 11.951930570656096 13.218665443656544 10 36.48589850085044 26.519648876359447 20.433569917371983 16.560882705418127 11 29.732616204670315 23.599605301278494 26.807868744500997 19.85990974955019 12 25.74030064240103 20.645779278744747 31.015921581959315 22.5979984968949 13 24.208651513742293 22.74905735211894 34.25753984671749 18.78475128742128 14 19.75385852210345 27.83844720476974 29.014953009257034 23.39274126386978 15 16.672493069787482 24.893815139454155 37.4134191150923 21.020272675666053 16 18.330826376394192 25.15028378324925 30.279122126754736 26.239767713601818 17 18.924371149362248 25.759864528109453 30.633303292612656 24.68246102991564 18 18.92340899104872 24.37243224000077 32.197986523369224 24.506172245581286 19 20.906631088190363 25.539423367832054 29.406337629904733 24.14760791407285 20 23.443414935048967 25.350305805983986 32.45317228941295 18.753106969554104 21 23.169948161048197 28.349460175732872 28.848927246933652 19.631664416285275 22 20.385034375778414 23.870613226255806 30.24512586634338 25.499226531622405 23 20.94308619762518 27.05974040968701 29.239456615747113 22.7577167769407 24 22.599922813521957 23.10345233093542 29.002231138222594 25.294393717320023 25 18.925654027113623 29.923337363707603 26.80872399633525 24.34228461284353 26 19.407802248670887 27.379497689216446 28.98031530996999 24.232384752142675 27 22.44362554081315 28.32027470688916 27.267352792450694 21.968746959846996 28 16.988080996624962 28.30477326739342 31.56905570575916 23.13809003022246 29 20.641503019573506 25.62847646507312 30.14559593413278 23.584424581220595 30 23.68341998103479 27.137568326603574 28.450379892174126 20.728631800187515 31 23.924494091813422 27.809689361843155 25.414449693552577 22.851366852790846 32 25.53450566978513 27.93156274822348 26.885162129021158 19.648769452970235 33 25.144297020409518 23.905144019063563 26.749818526251424 24.2007404342755 34 24.4858600145179 25.90055345484324 27.737206768890644 21.876379761748222 35 25.170061481916235 23.512262707705926 27.418625460633294 23.899050349744545 36 23.305826296214335 28.83791587956771 27.531091076836894 20.32516674738106 37 23.770548761648797 25.314919761341976 31.258813102885725 19.655718374123502 38 22.643861376506447 26.91702025984689 27.503295392223837 22.93582297142283 39 24.662469518290095 23.66599422491199 31.254109217797364 20.41742703900055 40 28.30295585724564 22.25782207982279 28.68653630490583 20.752685758025738 41 24.298559862817605 24.363345189261885 27.88944159538677 23.44865335253374 42 24.377136125089134 23.09564815794791 29.988657222548287 22.53855849441467 43 23.49964774315077 23.61970371938332 29.838346712679215 23.042301824786694 44 22.837682823442883 23.07426686209171 29.31300827349243 24.775042040972977 45 22.60323691437967 22.56047432266727 27.322409629280404 27.513879133672653 46 26.310432896406553 24.734524485325483 27.982770951799075 20.972271666468888 47 20.64620690466187 23.52113594548625 34.22910272322875 21.603554426623134 48 22.267978195354484 23.35350658597366 29.92761362287884 24.450901595793017 49 22.34815805481523 20.708426475603407 34.50577669160795 22.43763877797342 50 23.908885745838397 20.830086049025173 30.11106514132502 25.14996306381141 51 21.990128255703194 21.05202390001251 27.308725599932437 29.64912224435186 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 121.0 1 484.5 2 848.0 3 1797.5 4 2747.0 5 1940.0 6 1133.0 7 1162.5 8 1192.0 9 1327.0 10 1462.0 11 1471.5 12 1481.0 13 1458.0 14 1435.0 15 1450.0 16 1465.0 17 1421.5 18 1378.0 19 1604.0 20 1830.0 21 2293.0 22 2756.0 23 3280.0 24 3804.0 25 4400.0 26 6315.5 27 7635.0 28 9149.0 29 10663.0 30 12716.5 31 14770.0 32 16657.0 33 18544.0 34 20882.5 35 23221.0 36 26249.5 37 29278.0 38 32354.0 39 35430.0 40 38724.5 41 42019.0 42 47798.0 43 53577.0 44 59073.0 45 64569.0 46 100293.0 47 136017.0 48 124403.0 49 112789.0 50 106850.0 51 100911.0 52 83695.0 53 66479.0 54 56402.5 55 46326.0 56 41472.0 57 36618.0 58 33507.0 59 30396.0 60 28310.5 61 26225.0 62 22443.5 63 18662.0 64 15660.5 65 12659.0 66 10660.0 67 8661.0 68 7122.5 69 5584.0 70 4390.5 71 3197.0 72 2679.5 73 2162.0 74 1682.5 75 910.5 76 618.0 77 479.0 78 340.0 79 210.0 80 80.0 81 71.0 82 62.0 83 46.5 84 31.0 85 23.0 86 15.0 87 9.5 88 4.0 89 3.5 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 935397.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.95215206290054 #Duplication Level Percentage of deduplicated Percentage of total 1 69.06555827671829 19.30530987259949 2 12.699937141244977 7.099811483227161 3 5.221360825907401 4.378448153431068 4 2.651044371530149 2.9640958159402935 5 1.477592187709724 2.0650940758908045 6 0.9761692315590778 1.6371618479798469 7 0.6854795229655778 1.341243950335685 8 0.5559237095033737 1.243141125072804 9 0.43251673689446624 1.0880796239481298 >10 5.7718141331623976 39.304762566393705 >50 0.38576065370364493 6.520866052285069 >100 0.06603109927769668 3.2312900598282237 >500 0.004247614573419073 0.840176431362623 >1k 0.0046337613528208066 3.240788457305082 >5k 7.722935588034675E-4 1.308188379768113 >10k+ 0.0011584403382052016 4.431542104631965 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGC 14639 1.5650039501944095 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCG 13425 1.4352194843472879 No Hit GAATCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTC 12993 1.3890358852979001 No Hit GCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 6650 0.7109280872185821 No Hit CCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 5470 0.5847784416670141 No Hit CTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGCT 4673 0.49957397768006523 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 3563 0.38090778567816663 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCT 3279 0.3505463455623655 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGATGGGTT 3255 0.34798059005962173 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTC 3072 0.32841670435120063 No Hit GAACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCT 3008 0.3215746896772173 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTA 2624 0.2805226016333172 No Hit TCCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTG 1636 0.1748990001036993 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1429 0.1527693588925344 No Hit CGCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTG 1252 0.1338469120597992 No Hit GCCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTG 1220 0.13042590472280752 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGATGGGTTCGT 1014 0.10840316999092363 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0690647928098978E-4 0.0 0.0 0.5223450577669161 0.0 2 1.0690647928098978E-4 0.0 0.0 2.3268195215507426 0.0 3 1.0690647928098978E-4 0.0 0.0 3.1982142341700905 0.0 4 1.0690647928098978E-4 0.0 0.0 4.363708671291441 0.0 5 1.0690647928098978E-4 0.0 0.0 7.197478717592637 0.0 6 1.0690647928098978E-4 0.0 0.0 8.093889546363737 0.0 7 1.0690647928098978E-4 0.0 0.0 9.209672470619427 0.0 8 1.0690647928098978E-4 0.0 0.0 10.643502170736062 0.0 9 1.0690647928098978E-4 0.0 0.0 11.14874219181802 0.0 10 1.0690647928098978E-4 0.0 0.0 13.719949925005105 0.0 11 1.0690647928098978E-4 0.0 0.0 15.61059101108941 0.0 12 1.0690647928098978E-4 0.0 0.0 19.009361800390636 0.0 13 1.0690647928098978E-4 0.0 0.0 19.687469598469953 0.0 14 1.0690647928098978E-4 0.0 0.0 20.013961986194097 0.0 15 1.0690647928098978E-4 0.0 0.0 20.69249741019054 0.0 16 1.0690647928098978E-4 0.0 0.0 21.634129679697498 0.0 17 1.0690647928098978E-4 0.0 0.0 22.699987278128965 0.0 18 1.0690647928098978E-4 0.0 0.0 23.76776919318749 0.0 19 1.0690647928098978E-4 0.0 0.0 24.98842737361783 0.0 20 2.1381295856197957E-4 0.0 0.0 25.84891762535052 0.0 21 2.1381295856197957E-4 0.0 0.0 26.999872781289657 0.0 22 2.1381295856197957E-4 0.0 0.0 28.21336822760817 0.0 23 2.1381295856197957E-4 0.0 0.0 29.27527028630624 0.0 24 2.1381295856197957E-4 0.0 0.0 30.13565363155965 0.0 25 2.1381295856197957E-4 0.0 0.0 30.873308338598477 0.0 26 2.1381295856197957E-4 0.0 0.0 31.559647935582433 0.0 27 2.1381295856197957E-4 0.0 0.0 32.24021458268521 0.0 28 2.1381295856197957E-4 0.0 0.0 32.909342236504926 0.0 29 2.1381295856197957E-4 0.0 0.0 33.61738384878292 0.0 30 2.1381295856197957E-4 0.0 0.0 34.40004618359905 0.0 31 3.2071943784296936E-4 0.0 0.0 35.15170563942369 0.0 32 3.2071943784296936E-4 0.0 0.0 35.84371127980953 0.0 33 3.2071943784296936E-4 0.0 0.0 36.51722209927977 0.0 34 3.2071943784296936E-4 0.0 0.0 37.218742416321625 0.0 35 3.2071943784296936E-4 0.0 0.0 37.91801769729858 0.0 36 4.2762591712395913E-4 0.0 0.0 38.57613398375236 0.0 37 5.345323964049489E-4 0.0 0.0 39.237243651625995 0.0 38 6.414388756859387E-4 0.0 0.0 39.89097677242925 0.0 39 6.414388756859387E-4 0.0 0.0 40.57004672882209 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATCG 60 0.0 45.000004 40 CGTCGGA 30 2.1650667E-6 45.000004 23 TTACGAG 30 2.1650667E-6 45.000004 1 TCGCCTA 20 7.032612E-4 45.0 13 ATTACGC 25 3.890247E-5 45.0 41 CGTCTAC 25 3.890247E-5 45.0 42 GATCACG 25 3.890247E-5 45.0 38 CCGCTAT 20 7.032612E-4 45.0 23 TACGCTA 20 7.032612E-4 45.0 28 CCATACG 20 7.032612E-4 45.0 2 TGTCGAT 20 7.032612E-4 45.0 9 TAGTCCG 20 7.032612E-4 45.0 33 ACGACTA 20 7.032612E-4 45.0 28 GTCGGTA 20 7.032612E-4 45.0 14 TAATCGA 20 7.032612E-4 45.0 28 TTGCCCG 85 0.0 42.35294 1 TGCTACG 240 0.0 42.187504 4 TATTGCG 80 0.0 42.1875 1 CGGGCTA 65 0.0 41.53846 6 TACGGCT 2010 0.0 41.41791 7 >>END_MODULE