##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933891.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 391690 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.45611325282749 33.0 31.0 34.0 31.0 34.0 2 32.68837345860246 34.0 31.0 34.0 31.0 34.0 3 32.744272256120915 34.0 31.0 34.0 31.0 34.0 4 36.10855523500727 37.0 35.0 37.0 35.0 37.0 5 36.14463478771477 37.0 35.0 37.0 35.0 37.0 6 35.75934029462075 37.0 35.0 37.0 35.0 37.0 7 36.07020347723965 37.0 35.0 37.0 35.0 37.0 8 36.07350711021471 37.0 36.0 37.0 35.0 37.0 9 37.91886185503842 39.0 38.0 39.0 35.0 39.0 10 37.661219331614284 39.0 37.0 39.0 35.0 39.0 11 37.625933774158135 39.0 37.0 39.0 35.0 39.0 12 37.377883019734995 39.0 37.0 39.0 35.0 39.0 13 37.25032806556205 39.0 37.0 39.0 34.0 39.0 14 38.483047818427835 40.0 38.0 41.0 34.0 41.0 15 38.56672113150706 40.0 38.0 41.0 35.0 41.0 16 38.64144348847303 40.0 38.0 41.0 35.0 41.0 17 38.6471367663203 40.0 38.0 41.0 35.0 41.0 18 38.57937654778013 40.0 38.0 41.0 35.0 41.0 19 38.59701549694912 40.0 38.0 41.0 35.0 41.0 20 38.54291914524241 40.0 37.0 41.0 35.0 41.0 21 38.45440271643391 40.0 37.0 41.0 34.0 41.0 22 38.44430033955424 40.0 37.0 41.0 35.0 41.0 23 38.39615001659475 40.0 37.0 41.0 34.0 41.0 24 38.38301718195512 40.0 37.0 41.0 34.0 41.0 25 38.29818989507008 40.0 37.0 41.0 34.0 41.0 26 38.204332507850594 40.0 37.0 41.0 34.0 41.0 27 38.188439837626696 40.0 37.0 41.0 34.0 41.0 28 38.144057800811865 40.0 37.0 41.0 34.0 41.0 29 38.134621767213865 40.0 37.0 41.0 34.0 41.0 30 38.082422323776456 40.0 36.0 41.0 34.0 41.0 31 38.02856085169394 40.0 36.0 41.0 34.0 41.0 32 37.91431233883939 40.0 36.0 41.0 34.0 41.0 33 37.839932089152136 40.0 36.0 41.0 34.0 41.0 34 37.84211493783349 40.0 36.0 41.0 34.0 41.0 35 37.76670836631009 40.0 36.0 41.0 34.0 41.0 36 37.65763231126656 40.0 36.0 41.0 33.0 41.0 37 37.593849728101304 40.0 36.0 41.0 33.0 41.0 38 37.53470601751385 40.0 35.0 41.0 33.0 41.0 39 37.51757257014476 40.0 35.0 41.0 33.0 41.0 40 37.40691107763793 40.0 35.0 41.0 33.0 41.0 41 37.304807373177766 39.0 35.0 41.0 33.0 41.0 42 37.27288161556333 39.0 35.0 41.0 33.0 41.0 43 37.12392197911614 39.0 35.0 41.0 33.0 41.0 44 37.015461206566414 39.0 35.0 41.0 32.0 41.0 45 37.032890806505144 39.0 35.0 41.0 32.0 41.0 46 36.98187086726748 39.0 35.0 41.0 32.0 41.0 47 36.92045239858051 39.0 35.0 41.0 32.0 41.0 48 36.86327963440476 39.0 35.0 41.0 32.0 41.0 49 36.8700681661518 39.0 35.0 41.0 32.0 41.0 50 36.77073450943348 39.0 35.0 41.0 32.0 41.0 51 35.80015062932421 38.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 11.0 10 15.0 11 13.0 12 6.0 13 11.0 14 8.0 15 17.0 16 12.0 17 33.0 18 47.0 19 111.0 20 168.0 21 271.0 22 440.0 23 595.0 24 902.0 25 1339.0 26 1835.0 27 2288.0 28 2599.0 29 3263.0 30 3990.0 31 5319.0 32 7291.0 33 10646.0 34 21908.0 35 35277.0 36 25830.0 37 41555.0 38 84130.0 39 141655.0 40 100.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.286323367969565 5.395848757946335 53.64216599862136 15.675661875462737 2 20.690086548035435 5.703234700911435 52.981694707549345 20.62498404350379 3 20.821057468916745 5.135694043759095 52.22956930225433 21.813679185069827 4 19.77252419004825 5.1936480379892265 50.803186193162965 24.23064157879956 5 18.803135132375093 6.364471903801476 49.840179733973294 24.992213229850137 6 21.91707728050244 7.260078123005438 52.44785417038985 18.374990426102276 7 82.65439505731574 2.8788072199954042 9.52743240828206 4.939365314406801 8 83.84079246342772 3.7805407337435217 7.181955117567464 5.196711685261303 9 77.55444356506422 6.362429472286757 9.818223595190073 6.26490336745896 10 38.161811636753555 29.955577114554877 17.24322806300901 14.639383185682556 11 31.720237943271464 24.389695933008245 24.410630856034107 19.479435267686178 12 28.647655033317164 21.220863437922848 29.513645995557713 20.61783553320228 13 25.03867854680998 25.113737904975874 29.902473895172204 19.945109653041946 14 20.32015113993209 28.155429038270057 30.043656973627105 21.480762848170748 15 17.858255252878553 25.14182133830325 35.69991574970002 21.30000765911818 16 19.499859582833363 24.22042942122597 33.387117363220916 22.892593632719752 17 20.460568306568973 23.9761035512778 28.444688401542034 27.1186397406112 18 21.084020526436724 24.32510403635528 31.722280374786184 22.86859506242181 19 22.855319257576145 25.679491434552837 29.072225484439222 22.392963823431796 20 25.70017105363936 25.595496438510047 29.09698996655518 19.60734254129541 21 24.024100691873677 26.167121958691826 29.23127983864791 20.577497510786593 22 22.891827720901734 24.39786565906712 28.277719625213816 24.432586994817328 23 21.73759861114657 25.010850417421942 27.69077586867165 25.560775102759838 24 22.689627000944622 23.30848374990426 30.024253874237278 23.977635374913834 25 19.48913681738109 26.056830656897034 29.866731343664632 24.58730118205724 26 20.246112997523554 29.336465061655904 27.47019326508208 22.94722867573847 27 21.35566391789425 28.63591105210753 28.038499834052438 21.969925195945773 28 19.205238836835253 26.816359876432895 31.626796701473104 22.351604585258748 29 20.215476524802778 26.36038704077204 30.065868416349666 23.358268018075517 30 21.3694503306186 26.498761775894202 29.577982588271333 22.55380530521586 31 23.80887947101024 27.747453343205088 25.163777477086473 23.279889708698207 32 23.903597232505298 28.2544869667339 25.845183691184353 21.99673210957645 33 23.65135694043759 25.912583931170058 27.57614439990809 22.85991472848426 34 21.60739360208328 25.32130000765912 28.21210651280349 24.85919987745411 35 21.52671755725191 26.50208072710562 27.50287216931757 24.4683295463249 36 24.80175649110266 25.255176287370112 28.422987566698154 21.520079654829075 37 23.867854680997727 26.56258776072915 27.923357757410194 21.646199800862927 38 21.984732824427482 27.869743930148843 27.1398299675764 23.00569327784728 39 21.999795756848528 25.893691439658912 29.601470550690596 22.50504225280196 40 22.93165513543874 25.086930991345195 28.257805917945312 23.72360795527075 41 20.527713242615334 25.132630396487016 27.74132604866093 26.59833031223672 42 23.57093619954556 23.980188414307232 28.064030227986418 24.38484515816079 43 24.023845387934337 24.48186065510991 27.880977303479792 23.613316653475962 44 21.543312313308995 25.30036508463326 28.171002578569787 24.98532002348796 45 21.044193111899716 26.15486736960351 26.330771783808625 26.470167734688143 46 23.066966223288826 25.374147923102452 28.325972069749035 23.232913783859686 47 21.059766652199443 25.01978605529883 29.663764711889506 24.256682580612217 48 21.72381219842222 23.641144782864 30.35410656386428 24.280936454849495 49 21.778447241440936 22.520360489162346 32.38173045010085 23.319461819295874 50 21.92652352625801 23.243636549311955 29.84349868518471 24.98634123924532 51 20.540989047461004 23.663866833465242 27.40764379994383 28.387500319129927 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 159.0 1 246.0 2 333.0 3 744.0 4 1155.0 5 808.5 6 462.0 7 495.5 8 529.0 9 596.0 10 663.0 11 674.5 12 686.0 13 719.5 14 753.0 15 708.0 16 663.0 17 687.0 18 711.0 19 795.0 20 879.0 21 823.5 22 768.0 23 1202.5 24 1637.0 25 1902.5 26 2928.0 27 3688.0 28 3770.0 29 3852.0 30 4777.5 31 5703.0 32 6779.5 33 7856.0 34 9101.0 35 10346.0 36 11139.5 37 11933.0 38 12696.0 39 13459.0 40 17157.5 41 20856.0 42 22589.0 43 24322.0 44 27482.5 45 30643.0 46 34571.5 47 38500.0 48 41974.5 49 45449.0 50 43925.5 51 42402.0 52 35577.0 53 28752.0 54 25213.0 55 21674.0 56 19520.5 57 17367.0 58 15968.0 59 14569.0 60 12821.5 61 11074.0 62 10297.5 63 9521.0 64 8151.5 65 6782.0 66 5828.5 67 4875.0 68 3839.5 69 2804.0 70 2293.5 71 1783.0 72 1356.0 73 929.0 74 665.0 75 316.5 76 232.0 77 207.0 78 182.0 79 145.5 80 109.0 81 80.5 82 52.0 83 27.5 84 3.0 85 3.5 86 4.0 87 2.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 391690.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.976018925424846 #Duplication Level Percentage of deduplicated Percentage of total 1 71.41530372303923 22.121617996898266 2 12.067605824391332 7.47612772801826 3 4.553334170757969 4.231324963415475 4 2.279472613209486 2.824359472270587 5 1.2903505995946913 1.9984962296739226 6 0.8694025794600605 1.6158378453100808 7 0.6496994255211725 1.4087571190547044 8 0.44742907989808023 1.1087657317366686 9 0.3673515930493497 1.0241180908723462 >10 5.546584755663414 43.09776495555438 >50 0.46393518826905605 8.625843324676758 >100 0.04540290988398235 2.6284363541443803 >500 8.255074524360427E-4 0.15342560681842868 >1k 0.0033020298097441707 1.6851245815557419 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCTGC 2180 0.5565625877607292 No Hit CTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCTGCT 1712 0.4370803441497102 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCTGC 1477 0.377083918404861 No Hit TCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCTGC 1221 0.3117261099338763 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 600 0.1531823636038704 No Hit CGCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCTG 464 0.11846102785365979 No Hit TCCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCTG 440 0.11233373330950497 No Hit GAATCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTC 434 0.11080190967346626 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGC 420 0.10722765452270928 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCG 407 0.1039087033112921 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.5530393933978403E-4 0.0 0.0 0.45469631596415533 0.0 2 2.5530393933978403E-4 0.0 0.0 1.7912124384079247 0.0 3 2.5530393933978403E-4 0.0 0.0 2.502233909469223 0.0 4 2.5530393933978403E-4 0.0 0.0 3.2523168832495086 0.0 5 2.5530393933978403E-4 0.0 0.0 4.59827925144885 0.0 6 2.5530393933978403E-4 0.0 0.0 5.325640174627894 0.0 7 2.5530393933978403E-4 0.0 0.0 6.024662360540223 0.0 8 2.5530393933978403E-4 0.0 0.0 7.122469299701295 0.0 9 2.5530393933978403E-4 0.0 0.0 7.6652454747376755 0.0 10 2.5530393933978403E-4 0.0 0.0 8.808241211161889 0.0 11 2.5530393933978403E-4 0.0 0.0 10.630600730169267 0.0 12 2.5530393933978403E-4 0.0 0.0 12.444790523117772 0.0 13 2.5530393933978403E-4 0.0 0.0 13.034287319053332 0.0 14 2.5530393933978403E-4 0.0 0.0 13.227552401133549 0.0 15 2.5530393933978403E-4 0.0 0.0 13.579871837422452 0.0 16 2.5530393933978403E-4 0.0 0.0 14.331997242717454 0.0 17 2.5530393933978403E-4 0.0 0.0 15.444611810360234 0.0 18 2.5530393933978403E-4 0.0 0.0 16.686154867369602 0.0 19 2.5530393933978403E-4 0.0 0.0 17.48117133447369 0.0 20 2.5530393933978403E-4 0.0 0.0 18.330822844596494 0.0 21 2.5530393933978403E-4 0.0 0.0 19.414843371033214 0.0 22 2.5530393933978403E-4 0.0 0.0 20.54379739079374 0.0 23 2.5530393933978403E-4 0.0 0.0 21.58160790420996 0.0 24 2.5530393933978403E-4 0.0 0.0 22.40138885343001 0.0 25 2.5530393933978403E-4 0.0 0.0 23.09938982358498 0.0 26 2.5530393933978403E-4 0.0 0.0 23.760627026475017 0.0 27 2.5530393933978403E-4 0.0 0.0 24.378717863616636 0.0 28 2.5530393933978403E-4 0.0 0.0 25.03663611529526 0.0 29 2.5530393933978403E-4 0.0 0.0 25.700936965457377 0.0 30 2.5530393933978403E-4 0.0 0.0 26.47680563711098 0.0 31 2.5530393933978403E-4 0.0 0.0 27.171487656054534 0.0 32 2.5530393933978403E-4 0.0 0.0 27.86157420408997 0.0 33 2.5530393933978403E-4 0.0 0.0 28.49855753274273 0.0 34 2.5530393933978403E-4 0.0 0.0 29.10184074140264 0.0 35 5.106078786795681E-4 0.0 0.0 29.783246955500523 0.0 36 5.106078786795681E-4 0.0 0.0 30.423549235364703 0.0 37 5.106078786795681E-4 0.0 0.0 31.06563864280426 0.0 38 5.106078786795681E-4 0.0 0.0 31.71436595266665 0.0 39 5.106078786795681E-4 0.0 0.0 32.330414358293545 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGGG 40 6.7957444E-9 45.0 3 CGAAAGA 20 7.027586E-4 45.0 31 AACCCTC 20 7.027586E-4 45.0 21 ACCATAA 20 7.027586E-4 45.0 45 CGTTGAA 20 7.027586E-4 45.0 18 CTAACGC 20 7.027586E-4 45.0 23 CCGTACG 20 7.027586E-4 45.0 20 CCCCGAC 20 7.027586E-4 45.0 28 GTTCGCG 40 6.7957444E-9 45.0 1 GTTCGAC 20 7.027586E-4 45.0 25 GGACGAT 20 7.027586E-4 45.0 8 ACTAACG 20 7.027586E-4 45.0 16 CGTACGC 20 7.027586E-4 45.0 21 GCGGATA 25 3.8860802E-5 45.0 29 GGACCGT 20 7.027586E-4 45.0 8 CACAACG 20 7.027586E-4 45.0 12 ACGAGCA 25 3.8860802E-5 45.0 12 TCGCGCG 20 7.027586E-4 45.0 1 CTAGCTA 20 7.027586E-4 45.0 10 CGTTTTT 415 0.0 42.289154 1 >>END_MODULE