##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933890.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1100946 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.485232699878104 33.0 31.0 34.0 31.0 34.0 2 32.70819822225613 34.0 31.0 34.0 31.0 34.0 3 32.764982115380775 34.0 31.0 34.0 31.0 34.0 4 36.119234730858736 37.0 35.0 37.0 35.0 37.0 5 36.149149912893094 37.0 35.0 37.0 35.0 37.0 6 35.78177585458324 37.0 35.0 37.0 35.0 37.0 7 36.07857696926098 37.0 35.0 37.0 35.0 37.0 8 36.09518541327186 37.0 37.0 37.0 35.0 37.0 9 37.93712952315554 39.0 38.0 39.0 35.0 39.0 10 37.65927847505691 39.0 37.0 39.0 35.0 39.0 11 37.60367175138472 39.0 37.0 39.0 35.0 39.0 12 37.38885195095854 39.0 37.0 39.0 35.0 39.0 13 37.30700052500304 39.0 37.0 39.0 35.0 39.0 14 38.42287814297886 40.0 38.0 41.0 34.0 41.0 15 38.5289986974838 40.0 38.0 41.0 34.0 41.0 16 38.632494236774555 40.0 38.0 41.0 35.0 41.0 17 38.62726691409025 40.0 38.0 41.0 35.0 41.0 18 38.594587745448 40.0 38.0 41.0 35.0 41.0 19 38.600683412265454 40.0 38.0 41.0 35.0 41.0 20 38.55085444699377 40.0 38.0 41.0 34.0 41.0 21 38.47144455768039 40.0 38.0 41.0 34.0 41.0 22 38.488681552047055 40.0 38.0 41.0 34.0 41.0 23 38.45142631882036 40.0 37.0 41.0 34.0 41.0 24 38.43158429205429 40.0 37.0 41.0 34.0 41.0 25 38.338700535721095 40.0 37.0 41.0 34.0 41.0 26 38.25724422451238 40.0 37.0 41.0 34.0 41.0 27 38.22978783700563 40.0 37.0 41.0 34.0 41.0 28 38.1478446717641 40.0 37.0 41.0 34.0 41.0 29 38.09559233604555 40.0 37.0 41.0 34.0 41.0 30 38.02337898498201 40.0 37.0 41.0 34.0 41.0 31 37.94295633028323 40.0 36.0 41.0 34.0 41.0 32 37.84014747317307 40.0 36.0 41.0 34.0 41.0 33 37.788235753615524 40.0 36.0 41.0 33.0 41.0 34 37.71622132239002 40.0 36.0 41.0 33.0 41.0 35 37.63102186664923 40.0 36.0 41.0 33.0 41.0 36 37.546924190650586 40.0 36.0 41.0 33.0 41.0 37 37.49269446457864 40.0 35.0 41.0 33.0 41.0 38 37.44189088293159 40.0 35.0 41.0 33.0 41.0 39 37.38433401819889 39.0 35.0 41.0 33.0 41.0 40 37.26943192490822 39.0 35.0 41.0 33.0 41.0 41 37.16870400546439 39.0 35.0 41.0 32.0 41.0 42 37.16507712458195 39.0 35.0 41.0 32.0 41.0 43 37.047520041854916 39.0 35.0 41.0 32.0 41.0 44 36.93656273786362 39.0 35.0 41.0 32.0 41.0 45 36.94213340163823 39.0 35.0 41.0 32.0 41.0 46 36.863174033967155 39.0 35.0 41.0 32.0 41.0 47 36.79569933493559 39.0 35.0 41.0 32.0 41.0 48 36.73084420125964 39.0 35.0 41.0 31.0 41.0 49 36.703336040096424 39.0 35.0 41.0 31.0 41.0 50 36.61800487944004 39.0 35.0 41.0 31.0 41.0 51 35.69184047173976 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 27.0 10 30.0 11 25.0 12 16.0 13 19.0 14 22.0 15 28.0 16 61.0 17 85.0 18 151.0 19 277.0 20 463.0 21 843.0 22 1293.0 23 1792.0 24 2611.0 25 3804.0 26 5369.0 27 6440.0 28 7852.0 29 9556.0 30 12189.0 31 15781.0 32 21885.0 33 33640.0 34 66402.0 35 77600.0 36 78078.0 37 128834.0 38 242185.0 39 383310.0 40 277.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.612113582319207 4.452988611612195 53.24012258548557 15.694775220583027 2 20.692568027859675 4.347079693281959 52.05514166907369 22.905210609784675 3 22.119704327006048 4.9593713043146535 49.81661225891188 23.10431210976742 4 19.963286119391867 5.058740392353485 49.23820060202771 25.739772886226937 5 19.158977824525454 6.353354297122657 48.69439554710222 25.79327233124967 6 23.168166286084876 6.827491993249442 51.58926959178742 18.415072128878254 7 83.69929133672315 3.007141131354308 8.497691984892992 4.795875547029555 8 84.50441711037598 3.413518919184047 7.316889293389503 4.765174677050464 9 78.30438550119624 5.980038984655015 9.922830002561433 5.792745511587308 10 38.48617461710202 29.360295600329174 17.30257433152943 14.850955451039379 11 30.76281670490651 24.730004923038916 24.992869768362844 19.514308603691735 12 27.7139841554445 21.94512719061607 29.879939615566975 20.46094903837245 13 25.329580197393874 22.61228071131554 31.054747462636676 21.003391628653905 14 21.174789680874447 24.424631180820857 32.76236981650326 21.638209321801433 15 19.492236676458248 24.478948104630017 33.92682293227824 22.101992286633497 16 23.310770918827988 24.747626132435197 30.433372753977032 21.50823019475978 17 23.86774646531256 24.522910297144456 28.456254893518846 23.153088344024138 18 25.065443718402175 23.45419303035753 30.083582664363195 21.396780586877103 19 24.881601822432707 25.00876518921001 28.33426889238891 21.775364095968378 20 25.565649904718306 27.07898480034443 28.41792422153312 18.937441073404145 21 25.628777433225608 25.881105885302276 29.4820091085303 19.008107572941814 22 24.3372517816496 22.734357543421748 30.31093259796575 22.617458076962905 23 22.742441500309734 24.909577763123714 29.606810869924594 22.74116986664196 24 22.605559219071598 24.403921718231413 29.490819713228444 23.499699349468546 25 22.54370332423207 26.378768804282863 26.999780189037427 24.07774768244764 26 21.4104960642938 27.297705791201388 27.277813807398367 24.013984337106454 27 21.26007996759151 27.149742130858375 29.026491762538765 22.56368613901136 28 19.81214337487942 26.573782910333478 29.739060771372984 23.875012943414117 29 20.337782234551014 26.69240816534144 29.77820892214514 23.191600677962406 30 22.83735987051136 26.13988333669408 28.937477405794652 22.085279386999908 31 23.352008182054345 26.50030065053145 27.210780546911472 22.936910620502733 32 23.251821615229083 27.038292522975695 26.717295852839285 22.992590008955936 33 24.014075168082723 26.136613421548375 26.02779791197752 23.821513498391383 34 21.03881570939901 25.551026117538918 29.16827891649545 24.241879256566627 35 20.400001453295623 28.068588286800622 27.318960239648447 24.212450020255307 36 23.016296893762274 28.334995540199063 26.0099950406287 22.638712525409964 37 22.749980471340102 27.649403331316886 26.85626724653162 22.744348950811393 38 22.539888423228753 27.3345831675668 26.823840588003407 23.30168782120104 39 21.842851511336615 25.386258726586046 28.00982064515426 24.761069116923082 40 22.810383070559322 25.124847176882426 27.749226574237063 24.31554317832119 41 20.473847037002724 25.23084692618893 26.674151139111274 27.62115489769707 42 22.15549173165623 24.6803203790195 27.45093764816803 25.713250241156242 43 23.00276307829812 24.59094269837031 28.249614422505736 24.156679800825838 44 22.01606618308255 24.737089739187933 28.25588175986833 24.990962317861186 45 21.76737097005666 24.41518475928883 26.701037108087043 27.116407162567462 46 21.17042979401351 25.572189735009708 28.329909005527977 24.927471465448807 47 19.388961856439828 26.171310854483327 30.092847423942683 24.346879865134166 48 20.481295177056822 25.997914520784853 29.03021583256581 24.490574469592513 49 22.856616037480492 24.11934826957907 29.38854403394899 23.63549165899145 50 21.200858171063793 24.742721259716642 27.73242284362721 26.323997725592353 51 19.864371186234383 24.485033780040073 26.407562223760294 29.243032809965246 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 151.0 1 587.5 2 1024.0 3 1925.0 4 2826.0 5 2014.0 6 1202.0 7 1288.5 8 1375.0 9 1500.5 10 1626.0 11 1657.5 12 1689.0 13 1703.0 14 1717.0 15 1614.5 16 1512.0 17 1613.5 18 1715.0 19 1878.0 20 2041.0 21 2540.5 22 3040.0 23 3845.5 24 4651.0 25 5642.0 26 8182.0 27 9731.0 28 11547.0 29 13363.0 30 15782.0 31 18201.0 32 21415.0 33 24629.0 34 27966.5 35 31304.0 36 33455.0 37 35606.0 38 39499.0 39 43392.0 40 47167.5 41 50943.0 42 56100.5 43 61258.0 44 68995.0 45 76732.0 46 83360.0 47 89988.0 48 101831.0 49 113674.0 50 111932.0 51 110190.0 52 96458.5 53 82727.0 54 74485.0 55 66243.0 56 61639.5 57 57036.0 58 54208.5 59 51381.0 60 45934.0 61 40487.0 62 35043.0 63 29599.0 64 25186.0 65 20773.0 66 17944.0 67 15115.0 68 12682.0 69 10249.0 70 8981.5 71 7714.0 72 5946.0 73 4178.0 74 3451.0 75 2029.0 76 1334.0 77 915.0 78 496.0 79 427.5 80 359.0 81 247.5 82 136.0 83 129.0 84 122.0 85 82.0 86 42.0 87 26.5 88 11.0 89 8.0 90 5.0 91 3.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1100946.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.42277576818931 #Duplication Level Percentage of deduplicated Percentage of total 1 70.28503111489557 19.976956792388854 2 11.845656258843428 6.733728633443101 3 4.564243998706811 3.891854511796423 4 2.2896149735876277 2.6030885195907936 5 1.3567388718674473 1.9281142365537292 6 0.9150505257899662 1.560496554665516 7 0.6529155120813692 1.299036983682288 8 0.5323451639923228 1.2104581781947006 9 0.40939700770343534 1.047257941511017 >10 6.673503627196875 47.70277081938407 >50 0.411909051810438 6.980607294882933 >100 0.058428907248718034 2.8643148485751153 >500 0.0029053047802994197 0.5599626344022106 >1k 0.0022596814957884376 1.6413520509292387 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC 3848 0.3495175966850327 No Hit CCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC 3741 0.3397986822241963 No Hit CTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGCT 3689 0.33507547145818234 No Hit TCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC 2955 0.26840553487637 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1423 0.12925247923149727 No Hit TCCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTG 1126 0.10227567927945604 No Hit GCCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTG 1107 0.10054989073033556 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.816619525389983E-4 0.0 0.0 0.3483367939935292 0.0 2 1.816619525389983E-4 0.0 0.0 1.367187854808501 0.0 3 1.816619525389983E-4 0.0 0.0 1.9359714282081046 0.0 4 1.816619525389983E-4 0.0 0.0 2.568972501830244 0.0 5 1.816619525389983E-4 0.0 0.0 3.575833873777642 0.0 6 1.816619525389983E-4 0.0 0.0 4.229635240965497 0.0 7 1.816619525389983E-4 0.0 0.0 4.824123980649369 0.0 8 1.816619525389983E-4 0.0 0.0 5.727528870625807 0.0 9 1.816619525389983E-4 0.0 0.0 6.189586046908749 0.0 10 1.816619525389983E-4 0.0 0.0 7.082817867543004 0.0 11 1.816619525389983E-4 0.0 0.0 8.708692342767039 0.0 12 1.816619525389983E-4 0.0 0.0 10.153994837167309 0.0 13 1.816619525389983E-4 0.0 0.0 10.640213053137938 0.0 14 1.816619525389983E-4 0.0 0.0 10.83386469454451 0.0 15 1.816619525389983E-4 0.0 0.0 11.134242733067744 0.0 16 1.816619525389983E-4 0.0 0.0 11.780141805320152 0.0 17 1.816619525389983E-4 0.0 0.0 12.63858536204319 0.0 18 1.816619525389983E-4 0.0 0.0 13.554979081626165 0.0 19 1.816619525389983E-4 0.0 0.0 14.189887605749965 0.0 20 1.816619525389983E-4 0.0 0.0 14.957318524250962 0.0 21 1.816619525389983E-4 0.0 0.0 15.973989641635466 0.0 22 1.816619525389983E-4 0.0 0.0 17.040526964991926 0.0 23 1.816619525389983E-4 0.0 0.0 17.972816105422066 0.0 24 1.816619525389983E-4 0.0 0.0 18.697283972147588 0.0 25 1.816619525389983E-4 0.0 0.0 19.352629465932026 0.0 26 1.816619525389983E-4 0.0 0.0 19.940760037277034 0.0 27 1.816619525389983E-4 0.0 0.0 20.58130008192954 0.0 28 1.816619525389983E-4 0.0 0.0 21.210304592595822 0.0 29 1.816619525389983E-4 0.0 0.0 21.90361743446091 0.0 30 1.816619525389983E-4 0.0 0.0 22.725456107747338 0.0 31 1.816619525389983E-4 0.0 0.0 23.389612206229916 0.0 32 1.816619525389983E-4 0.0 0.0 23.997453099425403 0.0 33 1.816619525389983E-4 0.0 0.0 24.616738695630847 0.0 34 2.7249292880849745E-4 0.0 0.0 25.302421735489297 0.0 35 2.7249292880849745E-4 0.0 0.0 26.0144457584659 0.0 36 2.7249292880849745E-4 0.0 0.0 26.63300470686119 0.0 37 2.7249292880849745E-4 0.0 0.0 27.27545220201536 0.0 38 3.633239050779966E-4 0.0 0.0 27.99001949232751 0.0 39 3.633239050779966E-4 0.0 0.0 29.042387183385923 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATTC 25 3.890699E-5 45.0 23 ACTCGTA 45 1.9281288E-8 40.0 11 CGGTAGT 405 0.0 40.0 12 ACGGTTA 90 0.0 40.0 34 GGACCGT 85 0.0 39.705883 8 TCTTGCG 240 0.0 39.375004 1 CGTTAGG 80 0.0 39.375 2 CGTTTTT 1000 0.0 38.925003 1 TTTCTCG 430 0.0 38.720932 1 TCGTTTG 350 0.0 38.57143 1 TACGCGG 35 6.2480485E-6 38.571426 2 TTGGGAC 2005 0.0 38.491272 5 TTTAGCG 130 0.0 38.076927 1 ACGCCGG 345 0.0 37.826084 27 TATCTCG 30 1.13989045E-4 37.500004 1 GCGGATA 30 1.13989045E-4 37.500004 5 GCGCTTA 30 1.13989045E-4 37.500004 43 TTTGGGA 5505 0.0 37.35695 4 CGTTTGG 670 0.0 37.27612 2 TTTGTCG 200 0.0 37.125 1 >>END_MODULE