##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933888.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 381027 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.38799350177284 33.0 31.0 34.0 31.0 34.0 2 32.62579554729717 34.0 31.0 34.0 31.0 34.0 3 32.67071099948298 34.0 31.0 34.0 31.0 34.0 4 36.046085972910056 37.0 35.0 37.0 35.0 37.0 5 36.087006957512195 37.0 35.0 37.0 35.0 37.0 6 35.74028349697003 37.0 35.0 37.0 35.0 37.0 7 36.05822422033084 37.0 35.0 37.0 35.0 37.0 8 36.059709679366556 37.0 36.0 37.0 35.0 37.0 9 37.91496140693442 39.0 38.0 39.0 35.0 39.0 10 37.51418928317416 39.0 37.0 39.0 35.0 39.0 11 37.466407892354084 39.0 37.0 39.0 35.0 39.0 12 37.17973791883515 39.0 37.0 39.0 34.0 39.0 13 37.05749986221449 39.0 37.0 39.0 33.0 39.0 14 38.21447823907492 40.0 37.0 41.0 33.0 41.0 15 38.29374821206896 40.0 37.0 41.0 34.0 41.0 16 38.373159907303155 40.0 37.0 41.0 34.0 41.0 17 38.35882758964588 40.0 37.0 41.0 34.0 41.0 18 38.303967960275784 40.0 37.0 41.0 34.0 41.0 19 38.352707288459875 40.0 37.0 41.0 34.0 41.0 20 38.30422253541088 40.0 37.0 41.0 34.0 41.0 21 38.19269763035165 40.0 37.0 41.0 34.0 41.0 22 38.20296461930519 40.0 37.0 41.0 34.0 41.0 23 38.156214651455144 40.0 36.0 41.0 34.0 41.0 24 38.12397546630554 40.0 36.0 41.0 34.0 41.0 25 38.028312954200096 40.0 36.0 41.0 34.0 41.0 26 37.96007632005081 40.0 36.0 41.0 34.0 41.0 27 37.940219459513365 40.0 36.0 41.0 34.0 41.0 28 37.90329031800896 40.0 36.0 41.0 34.0 41.0 29 37.884480627357114 40.0 36.0 41.0 34.0 41.0 30 37.80391153382831 40.0 36.0 41.0 34.0 41.0 31 37.72769383796949 40.0 36.0 41.0 33.0 41.0 32 37.6169641521467 40.0 35.0 41.0 33.0 41.0 33 37.52252465048409 40.0 35.0 41.0 33.0 41.0 34 37.48912281806801 40.0 35.0 41.0 33.0 41.0 35 37.4318302902419 40.0 35.0 41.0 33.0 41.0 36 37.36004535111685 40.0 35.0 41.0 33.0 41.0 37 37.28665422660337 39.0 35.0 41.0 33.0 41.0 38 37.214549100195 39.0 35.0 41.0 33.0 41.0 39 37.127744228099324 39.0 35.0 41.0 32.0 41.0 40 37.08780480123456 39.0 35.0 41.0 32.0 41.0 41 37.038640306329995 39.0 35.0 41.0 32.0 41.0 42 37.013298270201325 39.0 35.0 41.0 32.0 41.0 43 36.87381996551426 39.0 35.0 41.0 32.0 41.0 44 36.71470263262184 39.0 35.0 41.0 31.0 41.0 45 36.68272852055104 39.0 35.0 41.0 31.0 41.0 46 36.57748401031948 39.0 35.0 41.0 31.0 41.0 47 36.492568768092546 39.0 35.0 40.0 31.0 41.0 48 36.36948300251688 38.0 35.0 40.0 31.0 41.0 49 36.31901938707755 38.0 35.0 40.0 31.0 41.0 50 36.1712004661087 38.0 35.0 40.0 31.0 41.0 51 35.19371068192018 37.0 34.0 39.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 15.0 11 7.0 12 11.0 13 10.0 14 7.0 15 10.0 16 10.0 17 21.0 18 41.0 19 100.0 20 191.0 21 285.0 22 470.0 23 654.0 24 947.0 25 1493.0 26 2100.0 27 2612.0 28 3075.0 29 3735.0 30 4658.0 31 6019.0 32 8269.0 33 12020.0 34 24258.0 35 35715.0 36 28076.0 37 44386.0 38 83923.0 39 117842.0 40 61.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.419550320580957 4.807533324410081 57.15894149233519 17.61397486267377 2 19.999107674784202 4.6623992525464075 53.80458602671202 21.533907045957374 3 20.095163859778967 4.716463662680073 52.255089534337465 22.9332829432035 4 19.958953040073276 4.836402669627087 50.88274584215817 24.32189844814147 5 18.18899972967795 5.457618488978471 51.03102929713642 25.322352484207155 6 20.72241599676663 6.113739971183144 54.29641468977265 18.867429342277582 7 83.34370005275217 2.1869841244846167 9.77621008484963 4.693105737913586 8 84.16358945691512 2.8352321489028336 7.625706314775593 5.375472079406447 9 78.56109934466586 5.098326365323192 10.544134667621979 5.796439622388965 10 39.90084692160923 24.39354691399822 20.434772338968106 15.270833825424447 11 31.598023237198415 22.892340962713927 24.01299645431951 21.49663934576815 12 26.269004558732057 20.072068383605362 30.928254428163882 22.730672629498695 13 23.47235235298286 25.29164599883998 31.564692265902416 19.671309382274746 14 20.2597191275159 26.88339671466851 31.763628299306873 21.093255858508712 15 17.872749175255297 25.048356153238483 36.85224406669344 20.226650604812782 16 19.845050350762545 24.04396538827957 33.10474060893323 23.00624365202466 17 20.319819855285846 23.275253459728575 29.07116818493178 27.3337585000538 18 20.731339248924616 23.47523928750456 33.027580722625956 22.765840740944867 19 23.02618974508368 26.007343311628834 29.46930270033357 21.49716424295391 20 25.860109651022107 26.17006143921559 28.34208599390594 19.627742915856356 21 24.17413989034898 26.940610507916762 29.13258115566613 19.752668446068125 22 22.243305592517064 24.534744256968665 28.48800741154826 24.733942738966004 23 20.773855920971478 26.396029677686883 27.306463846394085 25.52365055494755 24 22.389751907345147 23.537177155424683 30.410705803000837 23.662365134229333 25 20.442908245347443 25.092972414028402 28.616344773467496 25.847774567156655 26 20.300136210819705 26.621735467565287 28.352321489028338 24.725806832586667 27 19.686531400661895 27.085219682594676 29.37272161815304 23.85552729859039 28 18.66481902857278 25.139950712154256 31.769139719757394 24.42609053951557 29 20.034800683416133 25.45068984612639 29.999448857954945 24.515060612502527 30 21.405044786852375 26.148015757413518 29.36248612303065 23.084453332703454 31 23.717741787327405 27.36210294808504 26.408364761552335 22.51179050303522 32 24.25759854288541 27.56786264490443 24.69405055284796 23.480488259362197 33 22.61886952893102 28.369118198972775 25.059903891325284 23.952108380770916 34 20.42269970369554 25.975062134704363 28.89506517910804 24.707172982492054 35 19.828516089410986 26.67238804599149 27.330084219753452 26.169011644844066 36 23.756584179073926 26.560322496830935 26.842979631364706 22.840113692730437 37 21.541518055150945 27.56786264490443 28.24786694906135 22.64275235088327 38 20.725565379881218 30.294965973539934 25.10399525492944 23.87547339164941 39 20.284126846653912 30.41936660656594 27.125374317305596 22.17113222947455 40 21.758825490057134 26.049597535082814 28.9000517023728 23.291525272487252 41 18.762974802310598 25.15832211365599 27.697774698380957 28.38092838565246 42 22.498930521984008 24.382786521690065 25.381140969012694 27.737141987313237 43 22.456676298530027 24.801654475929528 26.598902439984567 26.142766785555878 44 21.577998409561527 24.94495140764303 27.396483713752566 26.080566469042875 45 21.229991575400167 25.355421006910273 25.793710157022993 27.620877260666564 46 22.705740013174918 26.00419392851425 27.67730370813617 23.61276235017466 47 19.26477651190073 25.626792851950125 30.10075401480735 25.007676621341794 48 19.873394798793786 24.68670199224727 28.9926960556601 26.447207153298848 49 21.821813152348785 23.223288638337966 30.78889422534361 24.166003983969638 50 20.52531710351235 24.326884971406226 29.042823736900537 26.10497418818089 51 19.468436619977062 23.520642894073124 26.85164043492981 30.159280051020005 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 76.0 1 185.5 2 295.0 3 799.0 4 1303.0 5 898.5 6 494.0 7 522.0 8 550.0 9 595.5 10 641.0 11 758.5 12 876.0 13 821.5 14 767.0 15 759.0 16 751.0 17 731.0 18 711.0 19 758.5 20 806.0 21 808.0 22 810.0 23 991.5 24 1173.0 25 1456.0 26 2230.5 27 2722.0 28 3199.0 29 3676.0 30 4409.0 31 5142.0 32 5577.5 33 6013.0 34 7134.5 35 8256.0 36 9018.5 37 9781.0 38 11496.5 39 13212.0 40 15567.0 41 17922.0 42 20911.0 43 23900.0 44 27261.5 45 30623.0 46 34767.0 47 38911.0 48 43752.0 49 48593.0 50 46493.0 51 44393.0 52 38042.5 53 31692.0 54 27198.5 55 22705.0 56 19270.5 57 15836.0 58 15032.5 59 14229.0 60 12925.0 61 11621.0 62 10090.0 63 8559.0 64 6926.5 65 5294.0 66 3893.5 67 2493.0 68 2109.0 69 1725.0 70 1471.5 71 1218.0 72 922.0 73 626.0 74 497.0 75 357.5 76 347.0 77 235.0 78 123.0 79 80.5 80 38.0 81 23.5 82 9.0 83 7.0 84 5.0 85 3.5 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 381027.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.86140645209623 #Duplication Level Percentage of deduplicated Percentage of total 1 70.29767045128797 23.10080321335289 2 12.633244240372221 8.302923475829505 3 5.060750964263026 4.989101831684557 4 2.4385168584662655 3.205323745053951 5 1.3872649865014772 2.279373928909342 6 0.8902588639218324 1.7553095024950056 7 0.6482987049898576 1.4912805072927537 8 0.5089962161398903 1.338106523292157 9 0.40094643416169246 1.1858097364655416 >10 5.42114033732312 41.90540114443936 >50 0.26009304689539886 5.3236121002129 >100 0.04721689159024163 2.7082229614183886 >500 0.0024008588944190662 0.5138733410964781 >1k 0.0032011451925587553 1.9008579884571872 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC 2644 0.6939140795796623 No Hit TCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC 1753 0.4600723833219168 No Hit CTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGCT 1503 0.39446023510144956 No Hit GCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC 1328 0.3485317313471224 No Hit TCCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTG 679 0.17820259456678922 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 651 0.17085403396609689 No Hit CGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTG 624 0.16376792195828643 No Hit TTCCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCT 452 0.11862676398260491 No Hit GCCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTG 436 0.11442758649649501 No Hit TGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTG 420 0.11022840901038508 No Hit TTTTCGGGGGCCCTAAACAGGCAGAACTACTGAAGATGCCTTAAAATATAT 385 0.10104270825951966 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.40863245911707047 0.0 2 2.624485928818693E-4 0.0 0.0 2.024265996897858 0.0 3 2.624485928818693E-4 0.0 0.0 2.9798413235807435 0.0 4 2.624485928818693E-4 0.0 0.0 3.958774575030116 0.0 5 2.624485928818693E-4 0.0 0.0 5.454206657271007 0.0 6 2.624485928818693E-4 0.0 0.0 6.442588058064127 0.0 7 2.624485928818693E-4 0.0 0.0 7.3231030871827985 0.0 8 2.624485928818693E-4 0.0 0.0 8.79465234747144 0.0 9 2.624485928818693E-4 0.0 0.0 9.45313586701205 0.0 10 2.624485928818693E-4 0.0 0.0 10.686119356371071 0.0 11 2.624485928818693E-4 0.0 0.0 12.954462544649067 0.0 12 2.624485928818693E-4 0.0 0.0 15.096830408343767 0.0 13 2.624485928818693E-4 0.0 0.0 15.777359609686453 0.0 14 2.624485928818693E-4 0.0 0.0 16.00044091363604 0.0 15 2.624485928818693E-4 0.0 0.0 16.35527141121233 0.0 16 2.624485928818693E-4 0.0 0.0 17.268854963034116 0.0 17 2.624485928818693E-4 0.0 0.0 18.569287740763777 0.0 18 2.624485928818693E-4 0.0 0.0 20.146078886798048 0.0 19 2.624485928818693E-4 0.0 0.0 21.087481989465314 0.0 20 2.624485928818693E-4 0.0 0.0 22.094759688945928 0.0 21 2.624485928818693E-4 0.0 0.0 23.378658205324033 0.0 22 2.624485928818693E-4 0.0 0.0 24.617415563726453 0.0 23 2.624485928818693E-4 0.0 0.0 25.867983108808563 0.0 24 2.624485928818693E-4 0.0 0.0 26.81962170659822 0.0 25 2.624485928818693E-4 0.0 0.0 27.640298456539824 0.0 26 2.624485928818693E-4 0.0 0.0 28.38119083424534 0.0 27 2.624485928818693E-4 0.0 0.0 29.072217979303304 0.0 28 2.624485928818693E-4 0.0 0.0 29.76665695606873 0.0 29 2.624485928818693E-4 0.0 0.0 30.55846436079333 0.0 30 2.624485928818693E-4 0.0 0.0 31.42874389478961 0.0 31 2.624485928818693E-4 0.0 0.0 32.217139467806746 0.0 32 2.624485928818693E-4 0.0 0.0 32.93677350948883 0.0 33 2.624485928818693E-4 0.0 0.0 33.68921362528115 0.0 34 2.624485928818693E-4 0.0 0.0 34.40622318103441 0.0 35 2.624485928818693E-4 0.0 0.0 35.16338737149861 0.0 36 2.624485928818693E-4 0.0 0.0 35.87199857227966 0.0 37 2.624485928818693E-4 0.0 0.0 36.56801224060237 0.0 38 2.624485928818693E-4 0.0 0.0 37.25825203988169 0.0 39 2.624485928818693E-4 0.0 0.0 38.05347127631375 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCGG 20 7.027342E-4 45.000004 2 CACGGAT 20 7.027342E-4 45.000004 21 TGGGTCG 40 6.7939254E-9 45.000004 6 TGGCGAT 20 7.027342E-4 45.000004 21 TTCGTCG 35 1.209064E-7 45.000004 1 ACGGGGC 20 7.027342E-4 45.000004 5 ACGGGAG 30 2.161667E-6 45.000004 5 TATTGCG 30 2.161667E-6 45.000004 1 TGTTGCG 20 7.027342E-4 45.000004 1 AGTTGTC 20 7.027342E-4 45.000004 24 TTGACGG 20 7.027342E-4 45.000004 2 CGGGCTT 30 2.161667E-6 45.000004 6 TGTTCGC 20 7.027342E-4 45.000004 11 CGGGCTA 65 0.0 45.000004 6 GCTAGCG 20 7.027342E-4 45.000004 23 TACTAGC 20 7.027342E-4 45.000004 41 ATACGGT 20 7.027342E-4 45.000004 21 ACGAGGC 20 7.027342E-4 45.000004 24 ATGTTCG 20 7.027342E-4 45.000004 10 CCGCAAC 20 7.027342E-4 45.000004 25 >>END_MODULE