##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933884.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2181667 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.408440426517885 33.0 31.0 34.0 31.0 34.0 2 32.63207171396918 34.0 31.0 34.0 31.0 34.0 3 32.6788309123253 34.0 31.0 34.0 31.0 34.0 4 36.05348295592315 37.0 35.0 37.0 35.0 37.0 5 36.09554849571452 37.0 35.0 37.0 35.0 37.0 6 35.71974137207924 37.0 35.0 37.0 35.0 37.0 7 36.04187531827726 37.0 35.0 37.0 35.0 37.0 8 36.05298929671668 37.0 36.0 37.0 35.0 37.0 9 37.892439588626495 39.0 38.0 39.0 35.0 39.0 10 37.58287630513731 39.0 37.0 39.0 35.0 39.0 11 37.50744270321731 39.0 37.0 39.0 35.0 39.0 12 37.27399598563851 39.0 37.0 39.0 35.0 39.0 13 37.19737888504525 39.0 37.0 39.0 34.0 39.0 14 38.2070723900577 40.0 38.0 41.0 33.0 41.0 15 38.34021278224404 40.0 38.0 41.0 33.0 41.0 16 38.46248442131636 40.0 38.0 41.0 34.0 41.0 17 38.43561322603312 40.0 38.0 41.0 34.0 41.0 18 38.38890719802793 40.0 38.0 41.0 34.0 41.0 19 38.395824385664724 40.0 37.0 41.0 34.0 41.0 20 38.32848505294346 40.0 37.0 41.0 34.0 41.0 21 38.24583449261505 40.0 37.0 41.0 34.0 41.0 22 38.274264587583716 40.0 37.0 41.0 34.0 41.0 23 38.2400228815855 40.0 37.0 41.0 34.0 41.0 24 38.210602718013334 40.0 37.0 41.0 34.0 41.0 25 38.106064766071086 40.0 36.0 41.0 34.0 41.0 26 38.03245454049587 40.0 36.0 41.0 34.0 41.0 27 38.01594560489754 40.0 36.0 41.0 34.0 41.0 28 37.9474319408049 40.0 36.0 41.0 34.0 41.0 29 37.922810401404064 40.0 36.0 41.0 34.0 41.0 30 37.826481768299196 40.0 36.0 41.0 34.0 41.0 31 37.73453923078087 40.0 36.0 41.0 33.0 41.0 32 37.668316017064015 40.0 36.0 41.0 33.0 41.0 33 37.58448379152272 40.0 36.0 41.0 33.0 41.0 34 37.47415806353582 40.0 35.0 41.0 33.0 41.0 35 37.41157747722269 40.0 35.0 41.0 33.0 41.0 36 37.29770812869242 40.0 35.0 41.0 32.0 41.0 37 37.228388658764146 40.0 35.0 41.0 32.0 41.0 38 37.22541066074704 40.0 35.0 41.0 32.0 41.0 39 37.204335950445234 39.0 35.0 41.0 32.0 41.0 40 37.08465636598069 39.0 35.0 41.0 32.0 41.0 41 36.93185302798273 39.0 35.0 41.0 32.0 41.0 42 36.90626892188405 39.0 35.0 41.0 32.0 41.0 43 36.79630667741686 39.0 35.0 41.0 31.0 41.0 44 36.69026207940992 39.0 35.0 41.0 31.0 41.0 45 36.69287659390732 39.0 35.0 41.0 31.0 41.0 46 36.611360028822 39.0 35.0 41.0 31.0 41.0 47 36.522314358699106 39.0 35.0 41.0 31.0 41.0 48 36.449197333965266 39.0 35.0 40.0 31.0 41.0 49 36.428632784013324 38.0 35.0 40.0 31.0 41.0 50 36.34632599750558 38.0 35.0 40.0 31.0 41.0 51 35.35355074812059 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 34.0 10 49.0 11 42.0 12 34.0 13 28.0 14 34.0 15 47.0 16 95.0 17 235.0 18 400.0 19 709.0 20 1160.0 21 1899.0 22 2951.0 23 4358.0 24 6445.0 25 9409.0 26 13266.0 27 15955.0 28 18443.0 29 22005.0 30 27427.0 31 36171.0 32 48315.0 33 72762.0 34 144320.0 35 155652.0 36 155840.0 37 247451.0 38 467421.0 39 728292.0 40 410.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.527712066048576 4.706676133433746 54.3523369973511 16.41327480316657 2 21.38254829907589 4.437524150110901 51.52995392972438 22.64997362108883 3 21.89710895384126 4.892726525175474 50.09811304841665 23.11205147256662 4 20.05878990698397 5.191626403112849 49.26925144854829 25.48033224135489 5 19.701906844628443 6.02497998090451 48.148365447155776 26.12474772731127 6 22.2587131766672 6.653261015544536 52.008762107141 19.079263700647257 7 82.01719144122362 2.8162868118736726 10.061618019615276 5.104903727287437 8 82.92791704691871 3.3541782499345683 8.568677071248729 5.149227631897993 9 76.60894169458491 5.718287896365486 11.240945570520157 6.431824838529436 10 40.33635747343659 24.998086325731652 19.075688452912384 15.589867747919367 11 30.475182509521385 23.499736669253373 25.687238244883385 20.337842576341853 12 27.630110369731035 20.65503122153839 30.8553046821536 20.85955372657697 13 26.284671308682768 20.97487838428138 31.85027779216535 20.890172514870507 14 20.748629373777025 23.00479404052039 34.32146152460481 21.925115061097774 15 19.222090264004542 22.9236634188444 35.49455531022837 22.359691006922688 16 24.161707538318176 23.29663509600686 30.62813894146082 21.913518424214146 17 23.54048532612906 24.115458500311917 29.165954290916073 23.178101882642952 18 24.62410624536192 23.000210389578243 30.585602660717697 21.790080704342138 19 24.039094875615756 25.257245950000616 28.844686196381026 21.8589729780026 20 25.099751703628463 27.558422068995863 28.11015613290204 19.23167009447363 21 24.61750578800523 26.2796292926464 29.96965164711205 19.133213272236322 22 23.219400577631692 23.393808495980366 31.137015869057926 22.249775057330016 23 22.70076047352781 24.125496695875217 30.233486595342 22.940256235254967 24 23.07515308248234 24.311776270164053 29.207665514489605 23.405405132863997 25 23.186627473395344 25.24441172736261 27.032677305931657 24.53628349331039 26 21.491593354989554 25.32416725375596 27.988414363878633 25.195825027375857 27 21.180088436961277 25.066657743826166 30.128154296691473 23.625099522521083 28 19.979401072665993 25.06427424533625 29.066443228962076 25.889881453035684 29 21.75863685887901 24.95321238300804 28.360836002928036 24.927314755184913 30 24.036528031088153 24.42985111843375 29.514403435538057 22.019217414940044 31 23.858040663400967 26.457337439673424 28.013211915475644 21.671409981449965 32 25.24766611953153 25.43133301278334 26.59237179642906 22.728629071256062 33 25.49096631154067 24.393411093443685 27.1147704943055 23.000852100710144 34 22.200775828758466 24.0404699708984 30.10486934990537 23.653884850437763 35 22.16451914980609 26.286596442078462 28.18482380674961 23.364060601365836 36 24.899675340003768 27.16697827853655 26.471500921084655 21.461845460375027 37 23.224259247630368 27.80158475147674 26.97386906434392 22.000286936548978 38 22.901982749888045 25.475886099941008 28.274525855687415 23.347605294483532 39 22.23680332516374 23.826046779824786 28.835702240534417 25.10144765447706 40 23.199690878580462 23.571745825554498 30.40661109142688 22.821952204438166 41 21.38286915464184 25.128262012488616 28.71327292386968 24.77559590899986 42 22.787437312843803 23.811104077753388 29.45733698130833 23.944121628094482 43 22.976467077697926 22.857292153202117 29.350721260394003 24.815519508705957 44 22.81489338198726 22.770340294829598 28.083204265362223 26.331562057820925 45 22.799813170387598 22.411807118134895 27.169178430988783 27.619201280488724 46 22.53125706168723 23.578346282911188 28.985220934267236 24.90517572113434 47 20.543144302040595 24.481004662948102 30.964395574576685 24.011455460434615 48 20.535718787514316 24.854159686148254 30.688093095784097 23.922028430553333 49 23.480943700390572 22.333610033061873 30.722103785774824 23.46334248077273 50 21.53642146120375 22.97600871260371 29.43391452499396 26.05365530119858 51 20.270646253529982 22.458697867273052 28.657352382375496 28.61330349682147 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 389.0 1 1317.5 2 2246.0 3 7180.0 4 12114.0 5 7845.5 6 3577.0 7 3851.0 8 4125.0 9 4061.0 10 3997.0 11 3995.5 12 3994.0 13 3940.0 14 3886.0 15 3912.0 16 3938.0 17 4074.5 18 4211.0 19 4637.0 20 5063.0 21 5657.0 22 6251.0 23 7400.0 24 8549.0 25 9796.0 26 13322.0 27 15601.0 28 19565.0 29 23529.0 30 27388.5 31 31248.0 32 35622.0 33 39996.0 34 47489.5 35 54983.0 36 58443.5 37 61904.0 38 67391.0 39 72878.0 40 81677.0 41 90476.0 42 100572.5 43 110669.0 44 123399.5 45 136130.0 46 158386.0 47 180642.0 48 210603.0 49 240564.0 50 238959.5 51 237355.0 52 208342.5 53 179330.0 54 159679.0 55 140028.0 56 129887.0 57 119746.0 58 113447.0 59 107148.0 60 94852.5 61 82557.0 62 71805.5 63 61054.0 64 52072.0 65 43090.0 66 35711.5 67 28333.0 68 23884.5 69 19436.0 70 16075.0 71 12714.0 72 10712.0 73 8710.0 74 6836.0 75 3972.5 76 2983.0 77 2092.5 78 1202.0 79 889.0 80 576.0 81 421.5 82 267.0 83 189.0 84 111.0 85 68.5 86 26.0 87 22.0 88 18.0 89 11.0 90 4.0 91 7.0 92 10.0 93 6.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2181667.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.272924345544403 #Duplication Level Percentage of deduplicated Percentage of total 1 69.1087847179365 19.539074419427337 2 12.394934443067442 7.008820875536567 3 5.0201247338278625 4.258008204141341 4 2.5215912440380945 2.85171033892305 5 1.4962153600351706 2.115119183945793 6 0.9901620345811629 1.6796865776126122 7 0.7129321069807001 1.4109672866922431 8 0.5675204218757189 1.2836369561794914 9 0.45967981634450095 1.169684340361364 >10 6.17206114150456 42.90888314486016 >50 0.47218098050457996 8.17901677988213 >100 0.07543200675708081 3.8248776246091207 >500 0.005587328364438387 1.1052797052157908 >1k 0.001971998246272372 1.0636499344867416 >5k 8.216659359468216E-4 1.6015846281261725 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGCT 7885 0.36142087678825413 RNA PCR Primer, Index 38 (96% over 26bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7567 0.34684486679222815 No Hit CCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 7410 0.3396485348130581 RNA PCR Primer, Index 38 (96% over 25bp) GCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 5811 0.266355956248135 RNA PCR Primer, Index 27 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 5798 0.26576008162565595 RNA PCR Primer, Index 27 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTG 3219 0.1475477238276969 RNA PCR Primer, Index 38 (95% over 24bp) TCCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTG 2598 0.11908325147696694 RNA PCR Primer, Index 38 (95% over 24bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.2918254710732665E-4 0.0 0.0 0.3786554043307251 0.0 2 2.2918254710732665E-4 0.0 0.0 1.31472859973589 0.0 3 2.2918254710732665E-4 0.0 0.0 1.9924672280416764 0.0 4 2.2918254710732665E-4 0.0 0.0 2.7236512263328914 0.0 5 2.2918254710732665E-4 0.0 0.0 3.958349280618903 0.0 6 2.2918254710732665E-4 0.0 0.0 4.935721171012808 0.0 7 2.2918254710732665E-4 0.0 0.0 5.781633952385951 0.0 8 2.2918254710732665E-4 0.0 0.0 7.01032742393775 0.0 9 2.2918254710732665E-4 0.0 0.0 7.66688958489082 0.0 10 2.2918254710732665E-4 0.0 0.0 8.727500576394107 0.0 11 2.2918254710732665E-4 0.0 0.0 10.755078570652625 0.0 12 2.2918254710732665E-4 0.0 0.0 12.479218872541043 0.0 13 2.75019056528792E-4 0.0 0.0 13.07440594737877 0.0 14 2.75019056528792E-4 0.0 0.0 13.33869926070294 0.0 15 3.208555659502573E-4 0.0 0.0 13.673168269951372 0.0 16 3.208555659502573E-4 0.0 0.0 14.369470684572851 0.0 17 3.208555659502573E-4 0.0 0.0 15.284596595172408 0.0 18 3.208555659502573E-4 0.0 0.0 16.218377965106498 0.0 19 3.208555659502573E-4 0.0 0.0 16.93947793132499 0.0 20 3.6669207537172265E-4 0.0 0.0 17.754771924404594 0.0 21 3.6669207537172265E-4 0.0 0.0 18.857414995047364 0.0 22 3.6669207537172265E-4 0.0 0.0 20.052968670287445 0.0 23 4.1252858479318795E-4 0.0 0.0 21.1370021181051 0.0 24 4.1252858479318795E-4 0.0 0.0 21.988552790137085 0.0 25 4.583650942146533E-4 0.0 0.0 22.776299041054386 0.0 26 4.583650942146533E-4 0.0 0.0 23.442853561061334 0.0 27 4.583650942146533E-4 0.0 0.0 24.13397645011819 0.0 28 4.583650942146533E-4 0.0 0.0 24.807268937010093 0.0 29 4.583650942146533E-4 0.0 0.0 25.54532841171453 0.0 30 4.583650942146533E-4 0.0 0.0 26.469804970236062 0.0 31 4.583650942146533E-4 0.0 0.0 27.199934728810582 0.0 32 5.042016036361186E-4 0.0 0.0 27.920713839463126 0.0 33 5.042016036361186E-4 0.0 0.0 28.638605250022117 0.0 34 5.042016036361186E-4 0.0 0.0 29.417367545092812 0.0 35 5.50038113057584E-4 0.0 0.0 30.241370474962494 0.0 36 5.50038113057584E-4 0.0 0.0 30.94409000090298 0.0 37 5.50038113057584E-4 0.0 0.0 31.6667484084418 0.0 38 5.958746224790492E-4 0.0 0.0 32.46540374860141 0.0 39 5.958746224790492E-4 0.0 0.0 33.7743569481502 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 3780 0.0 40.535717 1 TACGAAT 145 0.0 38.793102 12 TGGGCGA 2365 0.0 38.625793 6 TACGGGA 275 0.0 38.454544 4 TTACGGG 405 0.0 38.333332 3 TTGTTCG 425 0.0 38.11765 1 TAACCGA 30 1.1402578E-4 37.500004 12 ACGACGG 30 1.1402578E-4 37.500004 27 TTTCGCG 590 0.0 36.991528 1 GGGCGAT 3535 0.0 36.91655 7 TTTGGGA 9080 0.0 36.77313 4 TTTGGGC 4385 0.0 36.68757 4 TGTTTCG 345 0.0 36.52174 1 TTTTGCG 1645 0.0 36.519756 1 TTGGGAC 3715 0.0 36.460297 5 CTTACGG 105 0.0 36.428574 2 TTCGGGA 1595 0.0 36.394985 4 TTGGGCA 2645 0.0 36.153122 5 GGCCGAT 750 0.0 36.0 8 CCGCGTA 25 0.0021075227 36.0 44 >>END_MODULE