##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933881.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 361463 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.49682816775161 33.0 31.0 34.0 31.0 34.0 2 32.70763259310082 34.0 31.0 34.0 31.0 34.0 3 32.76154405845135 34.0 31.0 34.0 31.0 34.0 4 36.11371841654609 37.0 35.0 37.0 35.0 37.0 5 36.15235584278336 37.0 35.0 37.0 35.0 37.0 6 35.78833241576593 37.0 35.0 37.0 35.0 37.0 7 36.102801669880456 37.0 35.0 37.0 35.0 37.0 8 36.1066969510019 37.0 37.0 37.0 35.0 37.0 9 37.95812849447938 39.0 38.0 39.0 35.0 39.0 10 37.62487446847948 39.0 37.0 39.0 35.0 39.0 11 37.525478403045405 39.0 37.0 39.0 35.0 39.0 12 37.27566030271425 39.0 37.0 39.0 35.0 39.0 13 37.142869394654504 39.0 37.0 39.0 34.0 39.0 14 38.28604034161173 40.0 38.0 41.0 33.0 41.0 15 38.440197198606775 40.0 38.0 41.0 34.0 41.0 16 38.54803119544739 40.0 38.0 41.0 35.0 41.0 17 38.563717448258885 40.0 38.0 41.0 35.0 41.0 18 38.53594143798951 40.0 37.0 41.0 35.0 41.0 19 38.53509211177908 40.0 37.0 41.0 35.0 41.0 20 38.45587238527872 40.0 37.0 41.0 34.0 41.0 21 38.36338989052822 40.0 37.0 41.0 34.0 41.0 22 38.35935074959263 40.0 37.0 41.0 34.0 41.0 23 38.33637467735287 40.0 37.0 41.0 34.0 41.0 24 38.304822346962204 40.0 37.0 41.0 34.0 41.0 25 38.21847879312682 40.0 37.0 41.0 34.0 41.0 26 38.15008175110592 40.0 36.0 41.0 34.0 41.0 27 38.10081253129643 40.0 36.0 41.0 34.0 41.0 28 38.046497151852336 40.0 36.0 41.0 34.0 41.0 29 38.04326860563875 40.0 36.0 41.0 34.0 41.0 30 37.987531227262544 40.0 36.0 41.0 34.0 41.0 31 37.91362601428085 40.0 36.0 41.0 34.0 41.0 32 37.83941371592667 40.0 36.0 41.0 34.0 41.0 33 37.75208804220625 40.0 36.0 41.0 34.0 41.0 34 37.72774253519724 40.0 36.0 41.0 33.0 41.0 35 37.66839482879299 40.0 36.0 41.0 33.0 41.0 36 37.56813560447404 40.0 35.0 41.0 33.0 41.0 37 37.473118963766694 40.0 35.0 41.0 33.0 41.0 38 37.44087223311929 40.0 35.0 41.0 33.0 41.0 39 37.433554748342154 40.0 35.0 41.0 33.0 41.0 40 37.359323084243755 40.0 35.0 41.0 33.0 41.0 41 37.27982117118488 39.0 35.0 41.0 33.0 41.0 42 37.24395581290478 39.0 35.0 41.0 33.0 41.0 43 37.133546172084 39.0 35.0 41.0 33.0 41.0 44 37.02219314286663 39.0 35.0 41.0 32.0 41.0 45 37.01782201774456 39.0 35.0 41.0 32.0 41.0 46 36.9498759209103 39.0 35.0 41.0 32.0 41.0 47 36.89562693830351 39.0 35.0 41.0 32.0 41.0 48 36.85086717036045 39.0 35.0 41.0 32.0 41.0 49 36.84659010742455 39.0 35.0 41.0 32.0 41.0 50 36.742701189333346 39.0 35.0 41.0 32.0 41.0 51 35.83646458973671 38.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 6.0 10 4.0 11 11.0 12 4.0 13 3.0 14 1.0 15 10.0 16 11.0 17 18.0 18 42.0 19 93.0 20 160.0 21 278.0 22 417.0 23 584.0 24 905.0 25 1267.0 26 1768.0 27 2197.0 28 2598.0 29 3134.0 30 3882.0 31 5252.0 32 6916.0 33 10470.0 34 21960.0 35 32470.0 36 23839.0 37 37537.0 38 74441.0 39 131090.0 40 91.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.71290284206129 4.653035027098209 54.2641985486758 16.369863582164704 2 19.843801440258062 4.450524673341393 53.26326622641875 22.442407659981797 3 21.024281876706606 4.635329203818925 52.363589081040104 21.976799838434363 4 18.798051252825324 5.132198869593845 52.525154718463575 23.544595159117254 5 18.409353101147282 6.0628612057112345 49.93291152898084 25.594874164160647 6 21.697379814808155 6.7077404879614235 53.404082852186804 18.190796845043614 7 85.15505044776367 2.1412980028384645 7.947701424488813 4.755950124909051 8 86.13993686767387 2.923950722480586 6.26094510364823 4.675167306197315 9 80.17584095744239 5.090424192794283 9.286704309984701 5.447030539778622 10 40.96684861244443 23.61569510572313 18.767896022552794 16.64956025927965 11 31.288956269383032 26.18691263006172 24.221566246061148 18.302564854494097 12 27.693014222755856 22.939830632734193 29.080154815292296 20.28700032921765 13 24.26029773448458 27.423830378212983 29.144338424679706 19.17153346262273 14 19.1684902742466 28.41646309580787 31.176358299466333 21.238688330479192 15 17.495843281331698 26.292870916248688 35.90906953132132 20.302216271098285 16 19.88225627519276 25.244630847417298 33.07143469732725 21.801678180062687 17 20.96673795104893 25.02386136340372 28.071199541861823 25.938201143685525 18 22.065605608319526 24.474980841745904 31.421749943977666 22.037663605956904 19 23.675452259290715 26.021750497284646 29.38198377150635 20.920813471918287 20 25.48587268959755 27.100145796388563 28.06926296744065 19.34471854657323 21 24.27717359729765 26.51391705375101 29.415458843643748 19.793450505307597 22 22.3903968040989 25.423072347653843 28.548980116913764 23.637550731333498 23 20.754821378674997 26.155927439322973 29.11307658045222 23.97617460154981 24 21.58616511233515 25.244077540439825 30.92820012006761 22.24155722715741 25 20.48287099924474 26.66773639348979 29.271875682988302 23.577516924277173 26 20.830347781100695 28.073412769771732 28.154195588483468 22.942043860644105 27 20.532115320240248 28.058473481379835 29.699581976578514 21.709829221801403 28 19.633821442305297 27.062520921920086 30.903301306081122 22.400356329693498 29 19.859570689116175 25.612026680462453 31.407363962563252 23.12103866785812 30 21.33053728874048 27.070820526582253 29.583110857819474 22.015531326857797 31 23.14234098649101 28.45215139585518 26.740772914516835 21.664734703136972 32 24.114501345919223 27.00248711486376 27.114531777802988 21.76847976141403 33 23.39796881008568 26.452499979250987 27.254518443104825 22.895012767558505 34 21.489613044765303 26.176123144000908 28.453258009810135 23.881005801423658 35 21.16122535363232 26.62983486553257 28.62173998445207 23.587199796383032 36 25.099941072806896 25.38655408714032 28.636402619355234 20.877102220697555 37 22.575477988065167 28.14312944893392 28.75038385671563 20.53100870628529 38 21.038114551143547 28.914162722049007 27.91267709281448 22.135045633992966 39 20.363633345598306 27.73229901815677 28.091671900028498 23.812395736216434 40 22.38818357618899 25.787701645811605 28.365835507368665 23.45827927063074 41 20.642223408758294 25.23965108462 28.57387893090026 25.54424657572144 42 22.543939490348944 24.048104508621908 28.392947549265067 25.015008451764082 43 23.626484591783946 23.547085040515903 29.01016148264138 23.816268885058776 44 21.53387760296351 25.265656512561453 28.301098591003782 24.899367293471254 45 20.89923449979666 26.989484400893037 27.400591485158927 24.71068961415138 46 22.7082716626598 26.014834160066176 28.813737505636816 22.463156671637208 47 20.145630396472114 26.208491602183347 30.784616959412165 22.86126104193237 48 20.95290527661199 25.2211153008745 30.393152272846734 23.43282714966677 49 22.538683074062906 23.650000138326742 30.713517012806292 23.09779977480406 50 21.831003449869005 25.55448275480478 28.339000118961 24.275513676365215 51 20.08642654988201 25.36414515455247 26.989207747404297 27.560220548161222 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 49.0 1 153.0 2 257.0 3 545.0 4 833.0 5 609.0 6 385.0 7 418.5 8 452.0 9 476.5 10 501.0 11 543.0 12 585.0 13 555.5 14 526.0 15 572.5 16 619.0 17 635.5 18 652.0 19 651.5 20 651.0 21 804.0 22 957.0 23 1136.0 24 1315.0 25 1586.0 26 2514.5 27 3172.0 28 3696.0 29 4220.0 30 4983.5 31 5747.0 32 6776.5 33 7806.0 34 9237.0 35 10668.0 36 12063.0 37 13458.0 38 14081.5 39 14705.0 40 17427.5 41 20150.0 42 23279.5 43 26409.0 44 28586.5 45 30764.0 46 32560.0 47 34356.0 48 37179.5 49 40003.0 50 39188.5 51 38374.0 52 31765.5 53 25157.0 54 22360.0 55 19563.0 56 17542.5 57 15522.0 58 13503.5 59 11485.0 60 10345.0 61 9205.0 62 7887.5 63 6570.0 64 5872.0 65 5174.0 66 4310.0 67 3446.0 68 2779.0 69 2112.0 70 1799.0 71 1486.0 72 1226.0 73 966.0 74 777.5 75 528.0 76 467.0 77 329.5 78 192.0 79 111.0 80 30.0 81 24.5 82 19.0 83 12.5 84 6.0 85 3.5 86 1.0 87 1.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 361463.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.733279260737987 #Duplication Level Percentage of deduplicated Percentage of total 1 69.63876107884501 20.00949969450265 2 12.453011157121926 7.156316944293405 3 4.568605041339908 3.9381301345450503 4 2.228627698384003 2.561431281035332 5 1.3172866814386743 1.8924983042114114 6 0.8266199283842663 1.4250900746853816 7 0.6192115892331312 1.245438566044466 8 0.5414355082439153 1.2445774128041618 9 0.4018387981330794 1.0391531764101378 >10 7.012734920021766 50.29191779499532 >50 0.3460001445354986 5.828368446238079 >100 0.04187898003023326 1.9765970560190977 >500 9.971185721484109E-4 0.28106127148206045 >1k 0.002991355716445233 1.1099198427334376 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGTGACATGTCGTATGCCGTCTTCTGC 1618 0.44762534477941035 RNA PCR Primer, Index 41 (95% over 24bp) CTGTCTCTTATACACATCTGACGCGTGACATGTCGTATGCCGTCTTCTGCT 1192 0.32977095857667316 RNA PCR Primer, Index 41 (96% over 25bp) GCTGTCTCTTATACACATCTGACGCGTGACATGTCGTATGCCGTCTTCTGC 1064 0.2943593120181042 Illumina PCR Primer Index 3 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGTGACATGTCGTATGCCGTCTTCTGC 981 0.27139707245278216 Illumina PCR Primer Index 3 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 412 0.11398123736039373 No Hit TCCTGTCTCTTATACACATCTGACGCGTGACATGTCGTATGCCGTCTTCTG 397 0.10983143502931143 RNA PCR Primer, Index 41 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.34692347487847996 0.0 2 0.0 0.0 0.0 1.4338950321333028 0.0 3 0.0 0.0 0.0 2.00407787242401 0.0 4 0.0 0.0 0.0 2.5950097243701293 0.0 5 0.0 0.0 0.0 3.594282125694746 0.0 6 0.0 0.0 0.0 4.244141170742234 0.0 7 0.0 0.0 0.0 4.830093259891054 0.0 8 0.0 0.0 0.0 5.9239811543643475 0.0 9 0.0 0.0 0.0 6.484481122549196 0.0 10 0.0 0.0 0.0 7.446128649405333 0.0 11 0.0 0.0 0.0 9.10881611672564 0.0 12 0.0 0.0 0.0 10.546584297701287 0.0 13 0.0 0.0 0.0 10.993932988991958 0.0 14 0.0 0.0 0.0 11.159095121769033 0.0 15 0.0 0.0 0.0 11.42910892677812 0.0 16 0.0 0.0 0.0 12.047152820620644 0.0 17 0.0 0.0 0.0 12.914738161305584 0.0 18 0.0 0.0 0.0 13.95633854640724 0.0 19 0.0 0.0 0.0 14.58212873793445 0.0 20 0.0 0.0 0.0 15.317750364490971 0.0 21 0.0 0.0 0.0 16.350774491441726 0.0 22 0.0 0.0 0.0 17.326531346223543 0.0 23 0.0 0.0 0.0 18.21514235205263 0.0 24 0.0 0.0 0.0 18.930568273931218 0.0 25 0.0 0.0 0.0 19.57544755618141 0.0 26 0.0 0.0 0.0 20.11851835457571 0.0 27 0.0 0.0 0.0 20.65716269715019 0.0 28 0.0 0.0 0.0 21.254180925848566 0.0 29 0.0 0.0 0.0 21.8644785220064 0.0 30 0.0 0.0 0.0 22.553622362454803 0.0 31 0.0 0.0 0.0 23.164473265590114 0.0 32 0.0 0.0 0.0 23.74461563147542 0.0 33 0.0 0.0 0.0 24.339420632263884 0.0 34 0.0 0.0 0.0 24.92647933536766 0.0 35 0.0 0.0 0.0 25.587681173453436 0.0 36 2.7665348873881973E-4 0.0 0.0 26.178889678888297 0.0 37 2.7665348873881973E-4 0.0 0.0 26.785590779692527 0.0 38 2.7665348873881973E-4 0.0 0.0 27.386758810721982 0.0 39 2.7665348873881973E-4 0.0 0.0 28.16526172803302 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGCGG 30 2.1613578E-6 45.000004 2 CGGATGT 45 3.8380676E-10 45.000004 21 GGTGCAA 30 2.1613578E-6 45.000004 8 CGATGTG 30 2.1613578E-6 45.000004 10 CGGTAGT 45 3.8380676E-10 45.000004 12 TTTCTCG 65 0.0 45.000004 1 ATTAGTC 35 1.2088458E-7 45.0 31 TCATTCG 20 7.0268626E-4 45.0 29 GGGTACG 20 7.0268626E-4 45.0 7 CACGCTA 20 7.0268626E-4 45.0 19 TTATCGG 20 7.0268626E-4 45.0 31 ACGGGTC 25 3.885482E-5 45.0 5 ATACTAG 20 7.0268626E-4 45.0 15 AGTGATC 25 3.885482E-5 45.0 30 AACGACG 20 7.0268626E-4 45.0 28 GCGATCT 75 0.0 45.0 9 TCTCCTA 25 3.885482E-5 45.0 34 CGTCATA 20 7.0268626E-4 45.0 38 ACAAGCC 20 7.0268626E-4 45.0 19 ATTTCGC 20 7.0268626E-4 45.0 11 >>END_MODULE