##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933878.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 524754 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.35962184185352 33.0 31.0 34.0 31.0 34.0 2 32.58360107783838 34.0 31.0 34.0 31.0 34.0 3 32.653033611940074 34.0 31.0 34.0 31.0 34.0 4 36.03652568632159 37.0 35.0 37.0 35.0 37.0 5 36.05867511252892 37.0 35.0 37.0 35.0 37.0 6 35.67475426580836 37.0 35.0 37.0 35.0 37.0 7 36.01141487249264 37.0 35.0 37.0 35.0 37.0 8 36.00949016110406 37.0 35.0 37.0 35.0 37.0 9 37.86503009028993 39.0 38.0 39.0 35.0 39.0 10 37.57314665538519 39.0 37.0 39.0 35.0 39.0 11 37.498854701441054 39.0 37.0 39.0 35.0 39.0 12 37.10010023744459 39.0 35.0 39.0 34.0 39.0 13 36.87290997305404 39.0 35.0 39.0 33.0 39.0 14 37.730770989835236 40.0 36.0 41.0 33.0 41.0 15 37.92591766808828 40.0 36.0 41.0 33.0 41.0 16 38.12907571928942 40.0 36.0 41.0 33.0 41.0 17 38.14829424835256 40.0 36.0 41.0 34.0 41.0 18 38.13258402985018 40.0 36.0 41.0 34.0 41.0 19 38.163316525457645 40.0 36.0 41.0 34.0 41.0 20 38.045272642037986 40.0 36.0 41.0 34.0 41.0 21 37.96548096822511 40.0 36.0 41.0 34.0 41.0 22 38.004445892742126 40.0 36.0 41.0 34.0 41.0 23 37.99367132027579 40.0 36.0 41.0 34.0 41.0 24 37.94792035887292 40.0 35.0 41.0 34.0 41.0 25 37.81152692499724 40.0 35.0 41.0 34.0 41.0 26 37.76882501133865 40.0 35.0 41.0 34.0 41.0 27 37.741859995350204 40.0 35.0 41.0 34.0 41.0 28 37.66992152513368 40.0 35.0 41.0 33.0 41.0 29 37.65647331892658 40.0 35.0 41.0 33.0 41.0 30 37.603980150699186 40.0 35.0 41.0 33.0 41.0 31 37.43649024114156 39.0 35.0 41.0 33.0 41.0 32 37.36071949904146 39.0 35.0 41.0 33.0 41.0 33 37.34708072735034 39.0 35.0 41.0 33.0 41.0 34 37.27324613056785 39.0 35.0 41.0 33.0 41.0 35 37.1934982868163 39.0 35.0 41.0 32.0 41.0 36 37.102539475640015 39.0 35.0 41.0 32.0 41.0 37 37.00456023203253 39.0 35.0 41.0 32.0 41.0 38 36.93492379286294 39.0 35.0 41.0 32.0 41.0 39 36.938626480217394 39.0 35.0 41.0 32.0 41.0 40 36.78175297377438 39.0 35.0 41.0 32.0 41.0 41 36.62011151892125 39.0 35.0 41.0 31.0 41.0 42 36.61004013309093 39.0 35.0 41.0 31.0 41.0 43 36.52769678744707 38.0 35.0 41.0 31.0 41.0 44 36.4225789608083 38.0 35.0 40.0 31.0 41.0 45 36.440366343086474 38.0 35.0 40.0 31.0 41.0 46 36.374966174626586 38.0 35.0 40.0 31.0 41.0 47 36.25305381188138 38.0 35.0 40.0 31.0 41.0 48 36.20487123490245 38.0 35.0 40.0 31.0 41.0 49 36.215748712730154 38.0 35.0 40.0 31.0 41.0 50 36.126649820677876 38.0 35.0 40.0 31.0 41.0 51 35.120433574589235 36.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 6.0 10 9.0 11 13.0 12 10.0 13 6.0 14 13.0 15 23.0 16 27.0 17 47.0 18 92.0 19 177.0 20 307.0 21 520.0 22 763.0 23 1139.0 24 1474.0 25 2187.0 26 3000.0 27 3716.0 28 4520.0 29 5616.0 30 7084.0 31 9401.0 32 13087.0 33 19977.0 34 41180.0 35 47647.0 36 39024.0 37 59827.0 38 108862.0 39 154919.0 40 81.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.18589662965885 4.495058636999432 54.11583332380506 16.203211409536657 2 20.171165917744315 5.5250650781127915 51.94853207407662 22.355236930066276 3 21.783921608982496 5.811294435106736 49.95979068287236 22.444993273038413 4 20.499510246706077 4.8676141582532 50.191137180469326 24.441738414571397 5 18.700381512099 5.909054528407596 49.17351749581709 26.217046463676315 6 20.9532466641512 7.417570899888329 52.82418047313598 18.805001962824484 7 81.4686500722243 2.4903097451377216 10.812494997656044 5.228545184981916 8 82.07121813268694 3.878769861687572 8.246340189879449 5.8036718157460445 9 76.08860532744866 5.481425582272836 11.291004928023417 7.138964162255075 10 43.626537387042305 23.58552769488179 18.35259950376748 14.43533541430842 11 34.591446658815364 21.32237200669266 24.473562850402285 19.61261848408969 12 30.345457109426512 19.05826349108344 29.94393563460212 20.652343764887927 13 27.13404757276743 21.811934735133036 31.702473921113512 19.351543770986023 14 21.289213612473652 24.352363202567297 33.444051879547374 20.914371305411677 15 18.10181532680075 21.911028786822015 38.200566360618495 21.786589525758735 16 23.42087911669087 21.617557941435415 31.338874977608555 23.62268796426516 17 24.019254736505104 22.537989229238846 27.509080445313423 25.933675588942627 18 24.88956730201199 21.6173673759514 31.166413214572923 22.326652107463687 19 25.853828651139395 22.43260651657729 28.605594240348807 23.107970591934507 20 25.21810219645777 27.306509335803064 28.462670127335855 19.01271834040331 21 25.15654954512019 25.200189040960147 30.28771576776928 19.35554564615039 22 22.65366247803733 22.24337499094814 31.03244567930878 24.07051685170575 23 21.290357005377757 23.401441437321107 30.31744398327597 24.990757574025164 24 23.559991920023478 23.24841735365524 28.63151114617516 24.560079580146127 25 23.28595875400664 24.388380079046563 26.782644820239575 25.54301634670722 26 21.90245334004124 24.604671903406167 26.6791677624182 26.813706994134396 27 21.796880061895667 23.555990044859115 29.884860334556762 24.762269558688452 28 19.39727948715017 23.81001383505414 30.00739394077987 26.785312737015822 29 22.506355358891977 24.321110463188468 27.89630950883652 25.276224669083035 30 25.565693639305277 22.252712699664986 27.245718946401553 24.935874714628188 31 24.287380372517408 24.796952476779595 27.85629075719289 23.059376393510103 32 27.18931156313244 25.500710809255384 24.780182714186076 22.5297949134261 33 26.27364441242944 22.030322779816828 26.601798175907188 25.09423463184654 34 22.169054452181403 22.824218586232785 30.404722974955884 24.602003986629924 35 22.42345937334446 25.19980790999211 26.43390998448797 25.942822732175458 36 25.829055138217143 24.169229772426696 26.057352588069836 23.944362501286317 37 22.109216890199978 26.52042671423181 28.26600654783003 23.104349847738177 38 23.38352828182348 26.774831635394868 25.551972924456027 24.289667158325614 39 23.60668046360771 22.572481581845967 28.547471767723543 25.273366186822777 40 24.654981191186728 21.883396791639512 28.620458348102158 24.8411636690716 41 20.33105035883481 23.21335330459606 27.96796213082702 28.48763420574212 42 21.397454807395466 22.894346684351145 29.726881548306444 25.98131695994695 43 22.58696455863128 21.71036333215183 30.04569760306734 25.65697450614955 44 22.833365729465616 21.67053514599222 28.309646043669982 27.18645308087218 45 22.452425326915087 21.73742363088228 25.722529032651494 30.08762200955114 46 23.907583362870984 21.645380502101936 28.40130804148229 26.045728093544785 47 19.478460383341528 23.304634171440334 32.14992167758607 25.066983767632074 48 20.199179043894855 24.256127633138576 29.53631606428917 26.008377258677402 49 23.332266166622837 20.783071686923776 31.1540264581118 24.730635688341586 50 21.743521726370833 21.61508059014319 29.076290985871474 27.5651066976145 51 20.464446197646897 22.78496209652523 25.687083852624276 31.063507853203596 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 97.0 1 266.5 2 436.0 3 1046.0 4 1656.0 5 1154.5 6 653.0 7 670.5 8 688.0 9 787.0 10 886.0 11 891.5 12 897.0 13 869.5 14 842.0 15 872.5 16 903.0 17 821.5 18 740.0 19 794.0 20 848.0 21 980.0 22 1112.0 23 1283.5 24 1455.0 25 1815.0 26 2369.5 27 2564.0 28 3027.5 29 3491.0 30 4425.5 31 5360.0 32 6380.0 33 7400.0 34 8160.5 35 8921.0 36 10202.5 37 11484.0 38 13108.0 39 14732.0 40 17301.0 41 19870.0 42 22947.5 43 26025.0 44 29569.5 45 33114.0 46 40942.0 47 48770.0 48 55927.0 49 63084.0 50 62057.5 51 61031.0 52 52064.0 53 43097.0 54 38915.0 55 34733.0 56 32138.0 57 29543.0 58 27259.0 59 24975.0 60 22545.0 61 20115.0 62 18092.5 63 16070.0 64 13897.0 65 11724.0 66 10293.0 67 8862.0 68 7419.5 69 5977.0 70 4839.5 71 3702.0 72 3386.0 73 3070.0 74 2359.5 75 1406.0 76 1163.0 77 839.5 78 516.0 79 347.5 80 179.0 81 128.0 82 77.0 83 58.0 84 39.0 85 31.0 86 23.0 87 11.5 88 0.0 89 1.0 90 2.0 91 3.0 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 524754.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.546609574597483 #Duplication Level Percentage of deduplicated Percentage of total 1 69.59431172521558 21.258702688829917 2 12.497807821883526 7.635313121468531 3 4.960905309905702 4.546165129147109 4 2.5335800208879906 3.095691188962639 5 1.465349231497543 2.238072543249595 6 1.004127186176077 1.840360867161587 7 0.7015493108627234 1.500096702737607 8 0.5609347852525794 1.370772470553698 9 0.4729796462382457 1.3003132131333832 >10 5.847096157305906 42.67498028062291 >50 0.2919880045556785 5.532820620639627 >100 0.059911145643173784 3.121349970969809 >500 0.005045149106793581 1.152951896331192 >1k 0.004414505468444384 2.732409306192419 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTGC 3032 0.5777945475403713 No Hit GCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTGC 2653 0.5055702290978249 No Hit CTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTGCT 2638 0.5027117468375658 No Hit TCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTGC 2350 0.4478288874405912 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGC 1258 0.23973137889372925 No Hit GAATCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTC 1162 0.22143709242807108 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCG 1091 0.20790694306284468 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 963 0.18351456110863376 No Hit TCCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTG 926 0.17646363819999467 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 765 0.14578259527321374 No Hit GCCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTG 763 0.1454014643051792 No Hit CGCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTG 740 0.1410184581727819 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 692 0.1318713149399528 No Hit TGCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTG 577 0.10995628427796643 No Hit GTGGAAGGAAAAGAGCAGATCTTGGATGTGTTTCCACTTTGGGCCTCAACC 559 0.10652610556565552 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9056548401727287E-4 0.0 0.0 0.5286286526639149 0.0 2 1.9056548401727287E-4 0.0 0.0 2.189406845874448 0.0 3 1.9056548401727287E-4 0.0 0.0 3.1096475681938585 0.0 4 1.9056548401727287E-4 0.0 0.0 4.026267546316941 0.0 5 1.9056548401727287E-4 0.0 0.0 5.734687110531792 0.0 6 1.9056548401727287E-4 0.0 0.0 6.703140900307573 0.0 7 1.9056548401727287E-4 0.0 0.0 7.620332574882707 0.0 8 1.9056548401727287E-4 0.0 0.0 8.979445606893897 0.0 9 1.9056548401727287E-4 0.0 0.0 9.641279532885886 0.0 10 1.9056548401727287E-4 0.0 0.0 11.036028310408305 0.0 11 1.9056548401727287E-4 0.0 0.0 13.283367063424004 0.0 12 1.9056548401727287E-4 0.0 0.0 15.557575549686138 0.0 13 1.9056548401727287E-4 0.0 0.0 16.22893774987899 0.0 14 1.9056548401727287E-4 0.0 0.0 16.498206778795396 0.0 15 1.9056548401727287E-4 0.0 0.0 16.902396170396035 0.0 16 1.9056548401727287E-4 0.0 0.0 17.726210757802704 0.0 17 1.9056548401727287E-4 0.0 0.0 18.810528361860985 0.0 18 1.9056548401727287E-4 0.0 0.0 20.00156263696894 0.0 19 1.9056548401727287E-4 0.0 0.0 20.872828029895913 0.0 20 1.9056548401727287E-4 0.0 0.0 21.784493305434548 0.0 21 1.9056548401727287E-4 0.0 0.0 22.97781436635071 0.0 22 1.9056548401727287E-4 0.0 0.0 24.12387518723059 0.0 23 3.8113096803454573E-4 0.0 0.0 25.21867389290982 0.0 24 3.8113096803454573E-4 0.0 0.0 26.04306017676854 0.0 25 3.8113096803454573E-4 0.0 0.0 26.799795713801135 0.0 26 3.8113096803454573E-4 0.0 0.0 27.468489997217745 0.0 27 3.8113096803454573E-4 0.0 0.0 28.23246702264299 0.0 28 5.716964520518185E-4 0.0 0.0 28.903638657351827 0.0 29 5.716964520518185E-4 0.0 0.0 29.677334522461955 0.0 30 5.716964520518185E-4 0.0 0.0 30.60767521543428 0.0 31 5.716964520518185E-4 0.0 0.0 31.364791883434904 0.0 32 5.716964520518185E-4 0.0 0.0 32.02090884490637 0.0 33 5.716964520518185E-4 0.0 0.0 32.668831490565104 0.0 34 5.716964520518185E-4 0.0 0.0 33.42023119404521 0.0 35 5.716964520518185E-4 0.0 0.0 34.17563277268968 0.0 36 5.716964520518185E-4 0.0 0.0 34.85137797901493 0.0 37 5.716964520518185E-4 0.0 0.0 35.57895699699288 0.0 38 5.716964520518185E-4 0.0 0.0 36.351128338230865 0.0 39 5.716964520518185E-4 0.0 0.0 37.838110810017646 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTTC 20 7.0297765E-4 45.000004 44 GGTACGT 20 7.0297765E-4 45.000004 7 CTTCACG 20 7.0297765E-4 45.000004 1 ATTACGC 20 7.0297765E-4 45.000004 40 CATTACG 20 7.0297765E-4 45.000004 39 TGCATCA 40 6.8030204E-9 45.000004 35 GTTACGG 30 2.1632386E-6 45.000004 2 CCGTAGT 30 2.1632386E-6 45.000004 29 CTTATAG 20 7.0297765E-4 45.000004 21 CTAGTGA 20 7.0297765E-4 45.000004 35 TTAAGCG 20 7.0297765E-4 45.000004 24 CGTAGAT 20 7.0297765E-4 45.000004 22 TACGAAA 30 2.1632386E-6 45.000004 20 CCATATA 20 7.0297765E-4 45.000004 15 CATACGA 30 2.1632386E-6 45.000004 18 TCCGTAG 30 2.1632386E-6 45.000004 28 TAGGATC 20 7.0297765E-4 45.000004 19 CACGTGG 20 7.0297765E-4 45.000004 13 GTACGTC 20 7.0297765E-4 45.000004 8 ATCGACT 20 7.0297765E-4 45.000004 21 >>END_MODULE