##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933874.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 432918 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.37037730008916 33.0 31.0 34.0 31.0 34.0 2 32.596810481430666 34.0 31.0 34.0 31.0 34.0 3 32.65151830138733 34.0 31.0 34.0 31.0 34.0 4 36.05682138418823 37.0 35.0 37.0 35.0 37.0 5 36.08740916293617 37.0 35.0 37.0 35.0 37.0 6 35.701183595969674 37.0 35.0 37.0 35.0 37.0 7 36.03500431952472 37.0 35.0 37.0 35.0 37.0 8 36.03092964487501 37.0 35.0 37.0 35.0 37.0 9 37.86432072586494 39.0 38.0 39.0 35.0 39.0 10 37.558953427669906 39.0 37.0 39.0 35.0 39.0 11 37.50135591497697 39.0 37.0 39.0 35.0 39.0 12 37.28804300121501 39.0 37.0 39.0 35.0 39.0 13 37.14891041721527 39.0 37.0 39.0 33.0 39.0 14 38.266498505490645 40.0 38.0 41.0 33.0 41.0 15 38.34885590342744 40.0 38.0 41.0 34.0 41.0 16 38.47687090857853 40.0 38.0 41.0 34.0 41.0 17 38.461071149732746 40.0 37.0 41.0 34.0 41.0 18 38.430633514891966 40.0 37.0 41.0 34.0 41.0 19 38.45983303997524 40.0 37.0 41.0 34.0 41.0 20 38.37890778392213 40.0 37.0 41.0 34.0 41.0 21 38.27382090834754 40.0 37.0 41.0 34.0 41.0 22 38.22436812514148 40.0 37.0 41.0 34.0 41.0 23 38.08797047015832 40.0 36.0 41.0 34.0 41.0 24 37.995488753066404 40.0 36.0 41.0 34.0 41.0 25 37.81605292457232 40.0 36.0 41.0 33.0 41.0 26 37.68251031373147 40.0 36.0 41.0 33.0 41.0 27 37.64051621785188 40.0 36.0 41.0 33.0 41.0 28 37.55423659907881 39.0 36.0 41.0 33.0 41.0 29 37.539298435269494 39.0 36.0 41.0 33.0 41.0 30 37.47555195210178 39.0 36.0 41.0 33.0 41.0 31 37.31147700026333 39.0 35.0 41.0 32.0 41.0 32 37.20516356446255 39.0 35.0 41.0 32.0 41.0 33 37.06245986537866 39.0 35.0 41.0 31.0 41.0 34 37.10686088358534 39.0 35.0 41.0 31.0 41.0 35 37.09334562203466 39.0 35.0 41.0 31.0 41.0 36 37.069578996484324 39.0 35.0 41.0 32.0 41.0 37 37.01910061489705 39.0 35.0 41.0 31.0 41.0 38 37.019059036584295 39.0 35.0 41.0 32.0 41.0 39 37.035362354995634 39.0 35.0 41.0 32.0 41.0 40 36.94232626040035 39.0 35.0 41.0 31.0 41.0 41 36.81549854706896 39.0 35.0 41.0 31.0 41.0 42 36.78411385065994 39.0 35.0 41.0 31.0 41.0 43 36.647339680955746 39.0 35.0 41.0 31.0 41.0 44 36.53317487376362 39.0 35.0 41.0 31.0 41.0 45 36.58017222661105 39.0 35.0 40.0 31.0 41.0 46 36.50183637547988 39.0 35.0 40.0 31.0 41.0 47 36.45115703204764 38.0 35.0 40.0 31.0 41.0 48 36.46834504455809 38.0 35.0 40.0 31.0 41.0 49 36.54064973043394 39.0 35.0 40.0 31.0 41.0 50 36.47497216562952 38.0 35.0 40.0 31.0 41.0 51 35.43662079192826 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 15.0 11 8.0 12 9.0 13 4.0 14 9.0 15 7.0 16 12.0 17 27.0 18 53.0 19 123.0 20 171.0 21 316.0 22 499.0 23 780.0 24 1120.0 25 1650.0 26 2235.0 27 2903.0 28 3441.0 29 4513.0 30 5718.0 31 7518.0 32 10246.0 33 15093.0 34 27589.0 35 38341.0 36 34235.0 37 56814.0 38 101550.0 39 117837.0 40 76.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.342443603638564 4.564143787045122 54.1876290660125 15.905783543303812 2 20.365288576589563 5.963715992405028 52.1246517816307 21.54634364937471 3 20.09710845933872 6.260538947329517 51.681842750821176 21.960509842510593 4 19.80629126070064 4.74500944751662 50.74124892011882 24.707450371663917 5 19.270162016825356 6.109702068290069 49.42206145274625 25.198074462138326 6 21.6022433809636 7.191431171723052 52.374814630022314 18.831510817291033 7 81.40571655602216 2.301128620200592 10.761391302740934 5.531763521036316 8 81.48332940649269 4.021315815004227 8.405517904083453 6.089836874419636 9 75.05555324564929 5.9068922983105345 11.447433463150066 7.590120992890108 10 38.51930388664828 27.185517811687205 18.674437191338775 15.620741110325742 11 28.706822077160112 24.476228754637138 27.292697462336978 19.524251705865776 12 27.055470089023785 20.171256450413242 31.946927593678247 20.826345866884722 13 23.456405139079457 24.609510346070156 32.17838020133143 19.755704313518958 14 19.30827547018142 27.52599799500136 31.675975588910603 21.489750945906614 15 15.974849740597527 24.213361421793504 39.03025515224592 20.781533685363048 16 18.76845037628373 23.818598441275256 33.442591899620716 23.970359282820304 17 19.140807266041143 23.95465192022508 30.007299303794248 26.89724150993953 18 20.422574251936858 23.692015578007844 32.68193976688426 23.20347040317104 19 22.9378311828106 25.093897689631756 30.234132098919424 21.734139028638218 20 24.419174069916245 26.592333883091023 29.384086593766025 19.604405453226708 21 22.902258626344942 26.736934015217663 30.315671790038763 20.045135568398635 22 20.83142766066553 24.451512757612296 29.075945098147916 25.641114483574256 23 20.622843125025987 26.159919430469515 28.178315523956037 25.03892192054846 24 20.87854974845121 24.911415094775453 29.408571600164464 24.801463556608873 25 20.138455781464387 26.0924701675606 28.477217394518128 25.29185665645688 26 18.25357227003728 26.83926286271303 30.129031363907256 24.778133503342435 27 19.378727611233536 26.220438974586415 30.66793249529934 23.732900918880713 28 16.53015120646404 24.384294485329786 33.87824022101183 25.207314087194344 29 17.787895167214117 22.94406792972341 33.15408460724664 26.113952295815835 30 20.008177068174575 23.785335791073596 31.513358187924734 24.693128952827095 31 20.654257850216435 25.224869374800768 29.015194563404616 25.105678211578176 32 21.208866344203752 24.583639395913316 28.859506881210763 25.347987378672173 33 19.89522265186479 23.3619299728817 28.99325045389658 27.749596921356932 34 18.184506072743567 21.34722972941758 31.951547406206256 28.516716791632597 35 17.19632817300274 22.61467529647647 30.87582405905968 29.313172471461108 36 19.870737645466345 22.383684670076086 32.060574981867234 25.68500270259033 37 17.728299585602816 24.10826068678133 31.853145399359693 26.310294328256163 38 17.788357148466915 24.643465968151013 30.74208048637386 26.826096397008207 39 18.89618819268314 22.53613848350034 30.768875399036304 27.79879792478021 40 20.604825856166755 21.199395728521335 32.479129996904724 25.71664841840718 41 17.753939545133257 21.392503892192057 30.559828882143965 30.293727680530726 42 18.864311486239888 21.32828849805275 31.26758416143473 28.539815854272632 43 20.04836943716824 21.00813548986182 30.023468647642275 28.92002642532766 44 18.933839664786404 22.436119542268976 30.861040658970058 27.769000133974565 45 19.135494481633934 21.720279591054194 29.249650049201005 29.894575878110867 46 20.470389311601735 22.03211693669471 32.127331272896946 25.370162478806613 47 16.69854337310992 21.518624774206664 34.85879543008144 26.924036422601972 48 17.200024023025147 21.367094923288015 33.039975237804846 28.392905815881992 49 19.073127012505832 19.40552252389598 34.00020327175123 27.521147191846957 50 18.723407204135654 19.759631154167764 31.84944954933729 29.667512092359296 51 17.317367261236537 20.509195736837 29.407185656406064 32.766251345520395 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 49.0 1 192.5 2 336.0 3 766.5 4 1197.0 5 813.5 6 430.0 7 513.0 8 596.0 9 618.5 10 641.0 11 682.0 12 723.0 13 691.5 14 660.0 15 614.0 16 568.0 17 583.5 18 599.0 19 813.0 20 1027.0 21 1089.5 22 1152.0 23 1352.5 24 1553.0 25 1979.5 26 2683.0 27 2960.0 28 3898.5 29 4837.0 30 5595.0 31 6353.0 32 7198.0 33 8043.0 34 9274.5 35 10506.0 36 11610.5 37 12715.0 38 14052.0 39 15389.0 40 18184.0 41 20979.0 42 25009.5 43 29040.0 44 31353.5 45 33667.0 46 41020.5 47 48374.0 48 52918.0 49 57462.0 50 53693.5 51 49925.0 52 41503.0 53 33081.0 54 27661.5 55 22242.0 56 19290.0 57 16338.0 58 15202.5 59 14067.0 60 12355.5 61 10644.0 62 9128.5 63 7613.0 64 6604.5 65 5596.0 66 4760.5 67 3925.0 68 3433.0 69 2941.0 70 2191.5 71 1442.0 72 1349.5 73 1257.0 74 1069.0 75 590.5 76 300.0 77 251.0 78 202.0 79 166.5 80 131.0 81 93.0 82 55.0 83 31.5 84 8.0 85 4.5 86 1.0 87 1.5 88 2.0 89 2.5 90 3.0 91 1.5 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 432918.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.79483830213054 #Duplication Level Percentage of deduplicated Percentage of total 1 70.48004232158637 23.113815914637424 2 12.281484445760057 8.05538593017665 3 4.99276912761227 4.912111686597413 4 2.4756947210572187 3.2476003225003867 5 1.5387125628517797 2.52309148460905 6 0.9651320405473719 1.8990809525973817 7 0.6535542770160703 1.5003244785485501 8 0.5579543905858391 1.4638419215381104 9 0.41302649922172463 1.2190623530824356 >10 5.364906970656587 41.06948719206721 >50 0.21853993352884057 4.478200143079318 >100 0.05037771194983014 2.966385836527677 >500 0.004257271432380011 1.0676010525563997 >1k 0.00354772619365001 2.4840107314820328 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTGCT 2808 0.648621678932269 TruSeq Adapter, Index 27 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTGC 2729 0.6303734194466388 TruSeq Adapter, Index 16 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTGC 2102 0.48554229669360016 TruSeq Adapter, Index 16 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTGC 1998 0.4615192715479606 TruSeq Adapter, Index 16 (95% over 24bp) GAATCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTC 1038 0.23976827020359515 TruSeq Adapter, Index 16 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGC 971 0.22429189823476964 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCG 842 0.19449410742912052 No Hit TCCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTG 756 0.1746289135586878 TruSeq Adapter, Index 27 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 727 0.16793018539307675 No Hit GCCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTG 666 0.15383975718265352 TruSeq Adapter, Index 16 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTG 626 0.1446001321266383 TruSeq Adapter, Index 27 (95% over 22bp) TGCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTG 491 0.11341639756258691 TruSeq Adapter, Index 27 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.6198125280076137E-4 0.0 0.0 0.6920479166955404 0.0 2 4.6198125280076137E-4 0.0 0.0 2.4210127553023897 0.0 3 4.6198125280076137E-4 0.0 0.0 3.4299798114192526 0.0 4 4.6198125280076137E-4 0.0 0.0 4.49646353350981 0.0 5 4.6198125280076137E-4 0.0 0.0 6.337458825920844 0.0 6 4.6198125280076137E-4 0.0 0.0 7.3572824414785245 0.0 7 4.6198125280076137E-4 0.0 0.0 8.373872188266601 0.0 8 4.6198125280076137E-4 0.0 0.0 10.081354898618214 0.0 9 4.6198125280076137E-4 0.0 0.0 10.985221219722904 0.0 10 4.6198125280076137E-4 0.0 0.0 12.710490208307347 0.0 11 4.6198125280076137E-4 0.0 0.0 15.301050083387617 0.0 12 4.6198125280076137E-4 0.0 0.0 17.786740214082112 0.0 13 4.6198125280076137E-4 0.0 0.0 18.576959146997815 0.0 14 4.6198125280076137E-4 0.0 0.0 18.855302851810272 0.0 15 4.6198125280076137E-4 0.0 0.0 19.303424667027013 0.0 16 4.6198125280076137E-4 0.0 0.0 20.299918229318255 0.0 17 4.6198125280076137E-4 0.0 0.0 21.578913327697162 0.0 18 4.6198125280076137E-4 0.0 0.0 23.121237740172504 0.0 19 4.6198125280076137E-4 0.0 0.0 24.107105733649327 0.0 20 4.6198125280076137E-4 0.0 0.0 25.125081424195805 0.0 21 4.6198125280076137E-4 0.0 0.0 26.450736629107592 0.0 22 4.6198125280076137E-4 0.0 0.0 27.75929852766575 0.0 23 4.6198125280076137E-4 0.0 0.0 28.988399650742174 0.0 24 4.6198125280076137E-4 0.0 0.0 29.92067781889411 0.0 25 4.6198125280076137E-4 0.0 0.0 30.702581089259397 0.0 26 4.6198125280076137E-4 0.0 0.0 31.429739581167798 0.0 27 4.6198125280076137E-4 0.0 0.0 32.14881340115218 0.0 28 4.6198125280076137E-4 0.0 0.0 32.83370060842931 0.0 29 4.6198125280076137E-4 0.0 0.0 33.629925297631424 0.0 30 4.6198125280076137E-4 0.0 0.0 34.479046840279224 0.0 31 4.6198125280076137E-4 0.0 0.0 35.292595826461366 0.0 32 4.6198125280076137E-4 0.0 0.0 36.022526205886564 0.0 33 4.6198125280076137E-4 0.0 0.0 36.73513228833174 0.0 34 4.6198125280076137E-4 0.0 0.0 37.45559205207453 0.0 35 4.6198125280076137E-4 0.0 0.0 38.24650395686943 0.0 36 4.6198125280076137E-4 0.0 0.0 38.94501961110418 0.0 37 4.6198125280076137E-4 0.0 0.0 39.631523752766114 0.0 38 4.6198125280076137E-4 0.0 0.0 40.33535219140807 0.0 39 4.6198125280076137E-4 0.0 0.0 41.301124000388064 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGGTA 35 1.2095734E-7 45.000004 5 GTAGCGG 35 1.2095734E-7 45.000004 2 TTTAGCG 25 3.8867627E-5 45.0 1 TCGTTCG 45 3.8380676E-10 45.0 1 GGTACAT 20 7.0284103E-4 45.0 8 GGTCGCA 20 7.0284103E-4 45.0 23 TTAGCGA 20 7.0284103E-4 45.0 29 GCAACGA 20 7.0284103E-4 45.0 13 CAACCCG 20 7.0284103E-4 45.0 23 TTCCGTA 20 7.0284103E-4 45.0 1 AGGAACG 20 7.0284103E-4 45.0 10 CGTTCTA 20 7.0284103E-4 45.0 29 AAACGGC 20 7.0284103E-4 45.0 16 TGACCGT 20 7.0284103E-4 45.0 16 GGAACGA 25 3.8867627E-5 45.0 8 TCGTCGT 20 7.0284103E-4 45.0 31 CTGCAAC 20 7.0284103E-4 45.0 27 AACGAGG 20 7.0284103E-4 45.0 10 GTATCAC 20 7.0284103E-4 45.0 36 TCCAACG 25 3.8867627E-5 45.0 15 >>END_MODULE