##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933873.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 126305 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.70382011796841 34.0 31.0 34.0 31.0 34.0 2 32.94127706741617 34.0 33.0 34.0 31.0 34.0 3 33.03212857764934 34.0 33.0 34.0 31.0 34.0 4 36.28418510747793 37.0 37.0 37.0 35.0 37.0 5 36.27838169510312 37.0 37.0 37.0 35.0 37.0 6 35.91219666679862 37.0 36.0 37.0 35.0 37.0 7 35.99943786865128 37.0 36.0 37.0 35.0 37.0 8 36.13049364633229 37.0 37.0 37.0 35.0 37.0 9 37.90081152765132 39.0 39.0 39.0 35.0 39.0 10 37.83666521515379 39.0 38.0 39.0 35.0 39.0 11 37.87287122441708 39.0 38.0 39.0 35.0 39.0 12 37.74497446656902 39.0 37.0 39.0 35.0 39.0 13 37.65588060646847 39.0 37.0 39.0 35.0 39.0 14 39.01654724674399 40.0 38.0 41.0 35.0 41.0 15 39.065611020941375 40.0 38.0 41.0 35.0 41.0 16 39.18770436641463 40.0 39.0 41.0 35.0 41.0 17 39.07986223823285 40.0 38.0 41.0 35.0 41.0 18 39.03950754126915 40.0 38.0 41.0 35.0 41.0 19 39.04656981117137 40.0 38.0 41.0 35.0 41.0 20 38.96285974426982 40.0 38.0 41.0 35.0 41.0 21 38.95400023752029 40.0 38.0 41.0 35.0 41.0 22 38.9607616483908 40.0 38.0 41.0 35.0 41.0 23 38.818019872530776 40.0 38.0 41.0 35.0 41.0 24 38.77442698230474 40.0 38.0 41.0 35.0 41.0 25 38.732607576897195 40.0 38.0 41.0 35.0 41.0 26 38.66846126439967 40.0 38.0 41.0 35.0 41.0 27 38.606484303867624 40.0 38.0 41.0 35.0 41.0 28 38.506907881714895 40.0 38.0 41.0 35.0 41.0 29 38.49202327698824 40.0 38.0 41.0 35.0 41.0 30 38.43921459958038 40.0 38.0 41.0 35.0 41.0 31 38.390024147895964 40.0 38.0 41.0 35.0 41.0 32 38.26477178258976 40.0 38.0 41.0 35.0 41.0 33 38.173651082696644 40.0 38.0 41.0 34.0 41.0 34 38.10928308459681 40.0 38.0 41.0 34.0 41.0 35 38.02612723170104 40.0 37.0 41.0 34.0 41.0 36 37.93380309568109 40.0 37.0 41.0 34.0 41.0 37 37.91065278492538 40.0 37.0 41.0 34.0 41.0 38 37.83110724041012 40.0 37.0 41.0 34.0 41.0 39 37.800419619175806 40.0 37.0 41.0 34.0 41.0 40 37.692688333795175 40.0 37.0 41.0 34.0 41.0 41 37.562487629151654 40.0 36.0 41.0 33.0 41.0 42 37.55818059459246 40.0 36.0 41.0 33.0 41.0 43 37.380840030085906 40.0 36.0 41.0 33.0 41.0 44 37.35692965440798 40.0 36.0 41.0 33.0 41.0 45 37.379098214639164 40.0 36.0 41.0 33.0 41.0 46 37.2681287359962 40.0 35.0 41.0 33.0 41.0 47 37.144887375796685 39.0 35.0 41.0 33.0 41.0 48 37.12484858081628 39.0 35.0 41.0 33.0 41.0 49 37.13077075333518 39.0 35.0 41.0 33.0 41.0 50 37.03183563596057 39.0 35.0 41.0 33.0 41.0 51 36.384276156921736 39.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 0.0 13 0.0 14 0.0 15 4.0 16 8.0 17 9.0 18 18.0 19 42.0 20 113.0 21 181.0 22 268.0 23 382.0 24 405.0 25 562.0 26 656.0 27 744.0 28 737.0 29 822.0 30 951.0 31 1131.0 32 1513.0 33 2305.0 34 5374.0 35 8177.0 36 7041.0 37 11968.0 38 27010.0 39 55835.0 40 45.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.844582558093503 4.65856458572503 54.88302125806579 14.613831598115674 2 20.281857408653657 8.698784687858755 50.52056529828589 20.498792605201693 3 20.37211511816634 8.665531847511975 48.20078381695103 22.76156921737065 4 18.718182178061042 5.258699180555006 51.40651597323939 24.616602668144573 5 22.05930089861842 6.036973991528443 46.84929337714263 25.0544317327105 6 21.43462254067535 10.26404338703931 50.17220220893868 18.12913186334666 7 80.68326669569691 2.642017338981038 12.113534697755433 4.561181267566605 8 81.60088674240924 6.526265785202486 7.292664581766359 4.5801828906219075 9 75.35251969439057 5.994220339654012 9.469142155892483 9.184117810062943 10 38.04283282530383 29.2506234907565 17.12046237282768 15.586081311111991 11 31.550611614742092 24.953881477376193 24.678357943074307 18.817148964807412 12 28.873757966826336 20.825778868611692 28.564981592177663 21.73548157238431 13 25.323621392660623 22.524048929179365 31.492815011282214 20.659514666877797 14 20.71493606745576 27.06939551086655 29.096235303432167 23.119433118245517 15 17.531372471398598 24.84066347333835 36.03499465579352 21.59296939946954 16 20.225644273781718 23.900083132100868 32.86726574561577 23.007006848501643 17 19.76406318039666 24.38224931712917 31.418391987648945 24.435295514825224 18 20.756897985036222 24.446379794940817 30.337674676378608 24.459047543644353 19 22.875578955702466 26.55397648549147 28.56656506076561 22.003879498040458 20 27.048018684929335 25.233363683147935 29.49289418471161 18.225723447211113 21 24.4305451090614 27.835002573136457 27.3868809627489 20.347571355053244 22 21.581093385059972 24.425794703297573 29.119195597957326 24.873916313685125 23 22.079094255967696 27.582439333359726 28.41059340485333 21.927873005819247 24 22.655476821978542 23.749653616246388 28.899093464233406 24.695776097541668 25 21.31902933375559 27.338585170816675 27.204782075135586 24.13760342029215 26 20.570840425953048 26.645817663592098 29.171450061359405 23.611891849095443 27 21.170975020783025 27.992557697636673 28.76370689996437 22.07276038161593 28 18.912948814377895 27.077312853806262 31.907683781322987 22.102054550492856 29 20.716519536043705 24.963382288903844 30.656743596848894 23.663354578203556 30 21.83761529630656 25.553224337912194 30.363801908079648 22.245358457701595 31 21.886702822532758 27.220616761015005 26.340999960413285 24.551680456038955 32 23.56755472863307 27.758996080915242 26.60464748030561 22.068801710146076 33 23.100431495190215 24.997426863544593 26.644234195004156 25.257907446261036 34 22.379161553382684 25.157357190926728 28.460472665373498 24.00300859031709 35 21.799612050195954 23.4986738450576 28.896718261351488 25.804995843394956 36 20.123510549859468 26.95934444400459 29.948933138038875 22.968211868097065 37 20.247021099718935 26.291120699893117 29.9536835438027 23.50817465658525 38 22.09730414472903 26.987055144293574 26.408297375400814 24.507343335576582 39 22.538300146470842 23.444835913067575 27.35204465381418 26.6648192866474 40 25.22782154309014 22.284945172400143 29.720121927081273 22.767111357428448 41 20.384782866869877 23.767863505007718 30.165868334586914 25.681485293535488 42 22.805906337833022 24.07980681683227 29.804837496536162 23.309449348798545 43 21.630972645580144 23.6158505205653 30.578361901745776 24.174814932108784 44 21.584260322235856 24.337120462372827 29.336922528799334 24.74169668659198 45 21.40295316891651 22.882704564348206 28.127944261905704 27.586398004829576 46 22.494754760302442 24.95942361743399 28.314001820988878 24.231819801274693 47 19.060211393056488 24.634812556905903 32.674874312180826 23.630101737856776 48 20.57717430030482 24.012509401844742 30.76679466371086 24.643521634139585 49 21.363366454217964 21.786152567198446 32.04782075135584 24.802660227227744 50 21.151973397727723 22.137682593721546 29.731206207196863 26.979137801353865 51 20.121927081271526 21.91362178852777 28.06381378409406 29.900637346106645 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 43.0 1 97.5 2 152.0 3 325.5 4 499.0 5 356.0 6 213.0 7 218.0 8 223.0 9 221.0 10 219.0 11 212.0 12 205.0 13 219.0 14 233.0 15 219.5 16 206.0 17 227.5 18 249.0 19 272.5 20 296.0 21 342.5 22 389.0 23 495.0 24 601.0 25 698.5 26 1040.5 27 1285.0 28 1415.5 29 1546.0 30 1855.0 31 2164.0 32 2353.5 33 2543.0 34 2984.5 35 3426.0 36 3674.5 37 3923.0 38 4329.5 39 4736.0 40 5259.0 41 5782.0 42 6577.5 43 7373.0 44 8002.0 45 8631.0 46 11300.0 47 13969.0 48 13621.5 49 13274.0 50 12696.5 51 12119.0 52 10600.0 53 9081.0 54 7887.0 55 6693.0 56 6248.5 57 5804.0 58 5524.0 59 5244.0 60 4975.5 61 4707.0 62 4105.0 63 3503.0 64 2867.0 65 2231.0 66 1775.5 67 1320.0 68 1084.5 69 849.0 70 759.0 71 669.0 72 578.0 73 487.0 74 376.0 75 211.0 76 157.0 77 125.0 78 93.0 79 77.0 80 61.0 81 49.5 82 38.0 83 20.5 84 3.0 85 2.5 86 2.0 87 1.5 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 126305.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.52994734966945 #Duplication Level Percentage of deduplicated Percentage of total 1 72.25303574862079 38.67701199477455 2 11.153510523435536 11.940936621669767 3 5.669195840913461 9.104152646371876 4 3.7789708775199298 8.09152448438304 5 2.48776086731449 6.658485412295634 6 1.6550561299196878 5.315704049720914 7 1.0856221620742188 4.0679308024227065 8 0.6315540370649747 2.7045643482047423 9 0.37863661238555857 1.8241558133090534 >10 0.8652438212716865 6.589604528720161 >50 0.019227640472704144 0.767982265151815 >100 0.017748591205573056 1.9927952179248642 >500 0.0029580985342621763 1.256482324531887 >1k 0.0014790492671310882 1.008669490518982 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGC 1274 1.008669490518982 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCG 958 0.7584814536241637 No Hit GAATCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTC 629 0.4980008709077234 No Hit CCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTCTGC 331 0.2620640513043822 No Hit GCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTCTGC 301 0.23831202248525396 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTACGCGTT 299 0.23672855389731207 No Hit CTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTCTGCT 270 0.21376825937215468 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 250 0.19793357349273585 No Hit TCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTCTGC 195 0.15438818732433396 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTACGCGTTCGTA 168 0.13301136138711847 No Hit GAACTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTCT 163 0.12905268991726376 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCT 160 0.12667748703535092 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTC 159 0.12588575274137997 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.22326907089980602 0.0 2 0.0 0.0 0.0 0.9405803412374807 0.0 3 0.0 0.0 0.0 1.4077035746803372 0.0 4 0.0 0.0 0.0 2.096512410435058 0.0 5 0.0 0.0 0.0 3.493923439293773 0.0 6 0.0 0.0 0.0 4.2793238589129485 0.0 7 0.0 0.0 0.0 5.039388781125054 0.0 8 0.0 0.0 0.0 6.229365424963382 0.0 9 0.0 0.0 0.0 6.792288507976723 0.0 10 0.0 0.0 0.0 8.580024543763113 0.0 11 0.0 0.0 0.0 10.344800285024347 0.0 12 0.0 0.0 0.0 13.046989430347175 0.0 13 0.0 0.0 0.0 13.703337160049088 0.0 14 0.0 0.0 0.0 13.927397965242864 0.0 15 0.0 0.0 0.0 14.344641938165552 0.0 16 0.0 0.0 0.0 15.077787894382645 0.0 17 0.0 0.0 0.0 15.982740192391434 0.0 18 0.0 0.0 0.0 17.02070385178734 0.0 19 0.0 0.0 0.0 17.97078500455247 0.0 20 0.0 0.0 0.0 18.802106013221962 0.0 21 0.0 0.0 0.0 19.88044812161039 0.0 22 0.0 0.0 0.0 21.075175171212543 0.0 23 0.0 0.0 0.0 22.102846284786825 0.0 24 0.0 0.0 0.0 22.907248327461303 0.0 25 0.0 0.0 0.0 23.578639008748663 0.0 26 0.0 0.0 0.0 24.18906614940026 0.0 27 0.0 0.0 0.0 24.86758243933336 0.0 28 0.0 0.0 0.0 25.499386405922174 0.0 29 0.0 0.0 0.0 26.16206800997585 0.0 30 0.0 0.0 0.0 26.84929337714263 0.0 31 0.0 0.0 0.0 27.62994339099798 0.0 32 0.0 0.0 0.0 28.34250425557183 0.0 33 0.0 0.0 0.0 29.027354419856696 0.0 34 0.0 0.0 0.0 29.654407980681682 0.0 35 0.0 0.0 0.0 30.342425082142434 0.0 36 0.0 0.0 0.0 31.032025652191123 0.0 37 0.0 0.0 0.0 31.815050868928388 0.0 38 0.0 0.0 0.0 32.5204861248565 0.0 39 0.0 0.0 0.0 33.20771149202328 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCACCG 35 1.2004784E-7 45.000004 8 TTGTGCG 25 3.8710496E-5 45.0 1 CGAAAAA 20 7.009435E-4 45.0 22 CCGATGA 50 2.1827873E-11 45.0 18 ATAGCAA 20 7.009435E-4 45.0 10 TGCGGGT 25 3.8710496E-5 45.0 4 TACGAAA 20 7.009435E-4 45.0 20 GCGATTC 40 6.73208E-9 45.0 9 CGATGAA 50 2.1827873E-11 45.0 19 ACATACG 20 7.009435E-4 45.0 17 AACACAC 20 7.009435E-4 45.0 27 TCTTATG 30 2.1501346E-6 44.999996 1 CGGGAAC 30 2.1501346E-6 44.999996 6 TGGGCCG 30 2.1501346E-6 44.999996 6 GGACCAA 30 2.1501346E-6 44.999996 8 TGCGGGA 210 0.0 42.857147 4 TGGGCGA 155 0.0 42.09677 6 GTGCGGG 75 0.0 42.0 3 CGGGAAT 65 0.0 41.53846 6 TACGGCT 180 0.0 41.25 7 >>END_MODULE