##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933872.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1225795 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.44233742183644 33.0 31.0 34.0 31.0 34.0 2 32.653967425222 34.0 31.0 34.0 31.0 34.0 3 32.71739809674538 34.0 31.0 34.0 31.0 34.0 4 36.0830244861498 37.0 35.0 37.0 35.0 37.0 5 36.097694149511135 37.0 35.0 37.0 35.0 37.0 6 35.706408494079355 37.0 35.0 37.0 35.0 37.0 7 36.02649219486129 37.0 35.0 37.0 35.0 37.0 8 36.04196949734662 37.0 36.0 37.0 35.0 37.0 9 37.892868709694525 39.0 38.0 39.0 35.0 39.0 10 37.599285361744826 39.0 37.0 39.0 35.0 39.0 11 37.531183436055784 39.0 37.0 39.0 35.0 39.0 12 37.23073515555211 39.0 37.0 39.0 34.0 39.0 13 37.078570234011394 39.0 37.0 39.0 33.0 39.0 14 37.98216014912771 40.0 37.0 41.0 33.0 41.0 15 38.138933508457775 40.0 37.0 41.0 33.0 41.0 16 38.348535440265294 40.0 37.0 41.0 33.0 41.0 17 38.36417182318414 40.0 37.0 41.0 34.0 41.0 18 38.338162580203054 40.0 37.0 41.0 34.0 41.0 19 38.343232759148144 40.0 37.0 41.0 34.0 41.0 20 38.24242797531398 40.0 37.0 41.0 34.0 41.0 21 38.1770279696034 40.0 37.0 41.0 34.0 41.0 22 38.232873359737965 40.0 37.0 41.0 34.0 41.0 23 38.2100408306446 40.0 37.0 41.0 34.0 41.0 24 38.1741392320902 40.0 36.0 41.0 34.0 41.0 25 38.06737831366583 40.0 36.0 41.0 34.0 41.0 26 37.99127341847536 40.0 36.0 41.0 34.0 41.0 27 37.969490004446094 40.0 36.0 41.0 34.0 41.0 28 37.860393458938894 40.0 36.0 41.0 34.0 41.0 29 37.82649545804967 40.0 36.0 41.0 34.0 41.0 30 37.75290403370874 40.0 36.0 41.0 33.0 41.0 31 37.633257600169685 40.0 35.0 41.0 33.0 41.0 32 37.55750594512133 40.0 35.0 41.0 33.0 41.0 33 37.49836636631737 40.0 35.0 41.0 33.0 41.0 34 37.370445302844274 40.0 35.0 41.0 32.0 41.0 35 37.316063452698046 40.0 35.0 41.0 32.0 41.0 36 37.21151987077774 39.0 35.0 41.0 32.0 41.0 37 37.08664009887461 39.0 35.0 41.0 32.0 41.0 38 37.01912065231136 39.0 35.0 41.0 32.0 41.0 39 37.00562084198418 39.0 35.0 41.0 32.0 41.0 40 36.881597657030746 39.0 35.0 41.0 32.0 41.0 41 36.73463181037612 39.0 35.0 41.0 31.0 41.0 42 36.711078116650825 39.0 35.0 41.0 31.0 41.0 43 36.60502531010487 39.0 35.0 41.0 31.0 41.0 44 36.5024624835311 39.0 35.0 41.0 31.0 41.0 45 36.53693562137225 39.0 35.0 41.0 31.0 41.0 46 36.4939871675117 38.0 35.0 41.0 31.0 41.0 47 36.389806615298646 38.0 35.0 40.0 31.0 41.0 48 36.279164950093616 38.0 35.0 40.0 31.0 41.0 49 36.238121382449755 38.0 35.0 40.0 31.0 41.0 50 36.11946287919269 38.0 35.0 40.0 31.0 41.0 51 35.116085479219606 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 12.0 10 26.0 11 20.0 12 13.0 13 22.0 14 24.0 15 42.0 16 85.0 17 156.0 18 217.0 19 406.0 20 786.0 21 1283.0 22 1850.0 23 2560.0 24 3830.0 25 5266.0 26 7188.0 27 8791.0 28 10375.0 29 12828.0 30 15906.0 31 21153.0 32 29114.0 33 45298.0 34 89531.0 35 88512.0 36 88250.0 37 142294.0 38 257417.0 39 392270.0 40 267.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.68936486117173 4.432633515392052 55.52208974583841 15.355911877597803 2 20.221978389534957 5.2793493202370705 52.7462585505733 21.75241373965467 3 21.72557401523093 5.127529480867519 50.701136813251814 22.44575969064974 4 19.879343609657408 4.957843685118638 50.18204512173732 24.980767583486635 5 19.47560562736836 6.165060226220534 48.9522310011054 25.407103145305697 6 22.041369070684738 7.202590971573549 51.83729742738387 18.91874253035785 7 83.12009756933256 2.5960295155388953 9.574521025130629 4.70935188999792 8 84.85668484534527 3.4644455231094926 7.111874334615495 4.566995296929748 9 78.62970561961828 5.456948347806934 9.807349516028372 6.105996516546405 10 42.47627050200074 26.160410182779337 16.545833520286834 14.817485794933082 11 33.453554631891954 23.47121663899755 24.65714087592134 18.418087853189157 12 31.66916164611538 19.30575667220049 28.55722204773229 20.467859633951843 13 27.890960560289447 19.949828478660788 31.122414433082202 21.036796527967564 14 21.5932517264306 22.338971850921236 33.73647306441942 22.33130335822874 15 19.719202639919402 22.574818791070285 36.68199005543341 21.023988513576903 16 25.324952377844586 22.291900358542822 30.769908508355805 21.61323875525679 17 25.523925289302046 22.494952255475017 28.231637427139123 23.749485028083814 18 25.80643582328203 22.813765760180125 29.519291561802746 21.86050685473509 19 26.37357796368887 24.81875028043025 27.505904331474675 21.3017674244062 20 25.6086050277575 27.786212213298306 27.710016764630303 18.895165994313896 21 25.307657479431718 25.27755456662819 30.015051456401764 19.399736497538335 22 23.0553232799938 22.448288661644074 31.094024694178064 23.40236336418406 23 22.762044224360515 23.894125853017837 30.12355247002965 23.220277452591993 24 23.57816763814504 24.964125322749727 28.071006979144148 23.386700059961086 25 24.934838207041143 25.12442945190672 25.469022144812143 24.47171019623999 26 22.59366370396355 25.35578950803356 26.222818660542753 25.827728127460137 27 22.933606353427777 24.61333257192271 29.348545229830435 23.104515844819076 28 20.935148209937225 25.85016254757117 28.157073572661005 25.057615669830604 29 23.164069032750174 26.16171545813125 26.789879221240092 23.88433628787848 30 25.865173214118187 24.332779950970597 27.04595792934381 22.756088905567406 31 24.845671584563487 25.608115549500525 27.334668521245398 22.21154434469059 32 27.62566334501283 26.133733617774585 24.437773037090217 21.80283000012237 33 27.800651821878862 24.416562312621604 24.77559461410758 23.007191251391955 34 23.40954237861959 25.128508437381452 28.944644088122402 22.51730509587655 35 24.26490563267104 27.228043840935882 25.425213840813516 23.081836685579564 36 26.563250788263943 26.87513001766201 24.245163342973335 22.316455851100713 37 23.94601054825644 29.07468214505688 25.7886514466122 21.190655860074482 38 23.540885710905986 27.94398737146097 25.417300608992534 23.097826308640514 39 22.858471440983198 24.638785441285044 26.558192846275276 25.944550271456485 40 24.407751703996183 22.78260231115317 29.547110242740427 23.26253574211022 41 22.36719843040639 24.269800415240724 27.79534914076171 25.56765201359118 42 22.993893758744324 24.334329965450994 28.78890842269711 23.882867853107577 43 23.53117772547612 23.935976243988595 28.502318903242386 24.0305271272929 44 23.7390428252685 23.54047781235851 27.516836012546957 25.20364334982603 45 22.620666587806284 22.7913313400691 25.989990169645004 28.598011902479612 46 22.775994354684105 23.941442084524738 27.93403464690262 25.348528913888536 47 21.347615221142195 24.628424818179223 30.55527229267537 23.468687668003213 48 21.216108729436815 26.4815079193503 28.530790221856016 23.771593129356866 49 23.857822882292716 24.088775039872083 28.416007570597042 23.63739450723816 50 21.679236740237968 23.897389041397624 27.802528155197237 26.62084606316717 51 20.669279936694146 24.408893819929105 26.493908035193485 28.42791820818326 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 129.0 1 669.0 2 1209.0 3 2862.0 4 4515.0 5 3043.0 6 1571.0 7 1559.5 8 1548.0 9 1606.5 10 1665.0 11 1696.5 12 1728.0 13 1740.0 14 1752.0 15 1787.5 16 1823.0 17 1758.5 18 1694.0 19 2086.5 20 2479.0 21 2624.5 22 2770.0 23 3486.0 24 4202.0 25 5119.0 26 8049.5 27 10063.0 28 11561.5 29 13060.0 30 16261.5 31 19463.0 32 21600.0 33 23737.0 34 26269.0 35 28801.0 36 30406.0 37 32011.0 38 35920.0 39 39829.0 40 44493.0 41 49157.0 42 53319.5 43 57482.0 44 63527.5 45 69573.0 46 85495.5 47 101418.0 48 113676.0 49 125934.0 50 125583.5 51 125233.0 52 110891.5 53 96550.0 54 88092.5 55 79635.0 56 77180.0 57 74725.0 58 69923.0 59 65121.0 60 58725.5 61 52330.0 62 45507.0 63 38684.0 64 33297.5 65 27911.0 66 24517.0 67 21123.0 68 18274.0 69 15425.0 70 12704.5 71 9984.0 72 8272.5 73 6561.0 74 5260.5 75 3266.0 76 2572.0 77 1954.5 78 1337.0 79 940.5 80 544.0 81 406.0 82 268.0 83 185.5 84 103.0 85 79.5 86 56.0 87 33.0 88 10.0 89 10.5 90 11.0 91 7.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1225795.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.850332464272505 #Duplication Level Percentage of deduplicated Percentage of total 1 71.42229104688789 20.60556842062749 2 10.960976889945137 6.324556548162496 3 4.272083430547084 3.697530818591795 4 2.144565057247209 2.4748565957137423 5 1.3261116682314225 1.9129381256613787 6 0.8868232568942058 1.5351087479068068 7 0.7128511165538353 1.439619419707421 8 0.5547790535389613 1.2804448111050775 9 0.4698359629717376 1.2199431361865627 >10 6.833762761729127 47.13695160117153 >50 0.3359366788577334 5.998731202379488 >100 0.07369869200895267 3.716620162500734 >500 0.003142192293367147 0.6111680144742102 >1k 0.003142192293367147 2.045962395811319 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGCT 3365 0.2745157224495124 No Hit CCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGC 3290 0.2683972442374133 No Hit GCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGC 3220 0.26268666457278744 No Hit TCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGC 2661 0.2170836069652756 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2604 0.2124335635240803 No Hit GAATCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTC 2078 0.16952263632989203 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1813 0.1479040133138086 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGC 1701 0.13876708585040728 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 1633 0.13321966560477078 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCG 1427 0.11641424544887197 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.157970949465449E-5 0.0 0.0 0.28699741800219447 0.0 2 8.157970949465449E-5 0.0 0.0 1.0923523101334236 0.0 3 8.157970949465449E-5 0.0 0.0 1.5842779583861901 0.0 4 8.157970949465449E-5 0.0 0.0 2.1634938957982373 0.0 5 8.157970949465449E-5 0.0 0.0 3.2728963652160434 0.0 6 8.157970949465449E-5 0.0 0.0 4.128585938105474 0.0 7 8.157970949465449E-5 0.0 0.0 4.888419352338686 0.0 8 8.157970949465449E-5 0.0 0.0 6.108525487540739 0.0 9 8.157970949465449E-5 0.0 0.0 6.825447974579762 0.0 10 8.157970949465449E-5 0.0 0.0 8.01863280564858 0.0 11 8.157970949465449E-5 0.0 0.0 9.72927773404199 0.0 12 1.6315941898930897E-4 0.0 0.0 11.35703767758883 0.0 13 1.6315941898930897E-4 0.0 0.0 11.916021847046203 0.0 14 1.6315941898930897E-4 0.0 0.0 12.141834482927406 0.0 15 1.6315941898930897E-4 0.0 0.0 12.446616277599436 0.0 16 1.6315941898930897E-4 0.0 0.0 13.011147867302444 0.0 17 1.6315941898930897E-4 0.0 0.0 13.74299944117899 0.0 18 1.6315941898930897E-4 0.0 0.0 14.52591991319919 0.0 19 1.6315941898930897E-4 0.0 0.0 15.14094934307939 0.0 20 1.6315941898930897E-4 0.0 0.0 15.808597685583642 0.0 21 1.6315941898930897E-4 0.0 0.0 16.696592823432955 0.0 22 1.6315941898930897E-4 0.0 0.0 17.671470351894076 0.0 23 1.6315941898930897E-4 0.0 0.0 18.53507315660449 0.0 24 1.6315941898930897E-4 0.0 0.0 19.185997658662338 0.0 25 1.6315941898930897E-4 0.0 0.0 19.78193743652079 0.0 26 1.6315941898930897E-4 0.0 0.0 20.306413388861923 0.0 27 1.6315941898930897E-4 0.0 0.0 20.9278876157922 0.0 28 1.6315941898930897E-4 0.0 0.0 21.481487524422924 0.0 29 1.6315941898930897E-4 0.0 0.0 22.11715662080527 0.0 30 1.6315941898930897E-4 0.0 0.0 22.90040341166345 0.0 31 1.6315941898930897E-4 0.0 0.0 23.502706406862487 0.0 32 1.6315941898930897E-4 0.0 0.0 24.097259329659526 0.0 33 1.6315941898930897E-4 0.0 0.0 24.66521726716131 0.0 34 1.6315941898930897E-4 0.0 0.0 25.306596943208284 0.0 35 1.6315941898930897E-4 0.0 0.0 26.00214554635971 0.0 36 1.6315941898930897E-4 0.0 0.0 26.621825019681104 0.0 37 1.6315941898930897E-4 0.0 0.0 27.255046724778612 0.0 38 1.6315941898930897E-4 0.0 0.0 28.03038028381581 0.0 39 1.6315941898930897E-4 0.0 0.0 29.586023764169376 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGCGA 20 7.0334703E-4 45.0 14 CGTTCAT 100 0.0 40.500004 17 ACATACG 305 0.0 39.09836 17 CGTTTGG 785 0.0 38.694267 2 TTTGGGA 5670 0.0 38.650795 4 TTTGGGC 2360 0.0 38.61229 4 TCGATTG 35 6.248627E-6 38.57143 1 GCAATCG 35 6.248627E-6 38.57143 45 TCGTTTG 410 0.0 38.414635 1 CGGGTAT 130 0.0 38.076927 6 TTGGGAC 1900 0.0 37.776314 5 TTGGGCA 1085 0.0 37.53456 5 CCGAACG 30 1.1399662E-4 37.499996 37 TATGTCG 30 1.1399662E-4 37.499996 1 CATACGA 320 0.0 37.265625 18 TCTTGCG 315 0.0 37.142857 1 CGTTTTT 1380 0.0 36.847824 1 TACGAAA 325 0.0 36.692307 20 TTGGGAT 3185 0.0 36.66405 5 GTTGGGA 1960 0.0 36.6199 4 >>END_MODULE